RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 CA14Q9ULX7 337 aa14.61□□□□□ -0.07
NUDCD3-201ENST00000338427 DUSP12Q9UNI6 340 aa14.61□□□□□ -0.07
NUDCD3-201ENST00000338427 TIMM13Q9Y5L4 95 aaPredicted RBP14.61□□□□□ -0.07
NUDCD3-201ENST00000338427 MYH11P35749 1972 aa14.6□□□□□ -0.07
NUDCD3-201ENST00000338427 NOTCH4Q99466 2003 aa14.6□□□□□ -0.07
NUDCD3-201ENST00000338427 TISP43B9A030 160 aa14.6□□□□□ -0.07
NUDCD3-201ENST00000338427 ANKRD63C9JTQ0 380 aa14.6□□□□□ -0.07
NUDCD3-201ENST00000338427 STK25O00506 426 aa14.6□□□□□ -0.07
NUDCD3-201ENST00000338427 NRG2O14511 850 aaPredicted RBP14.6□□□□□ -0.07
NUDCD3-201ENST00000338427 CLDN3O15551 220 aa14.6□□□□□ -0.07
NUDCD3-201ENST00000338427 TBC1D4O60343 1298 aa14.6□□□□□ -0.07
NUDCD3-201ENST00000338427 CDR1P51861 262 aa14.6□□□□□ -0.07
NUDCD3-201ENST00000338427 CREMQ03060 361 aa14.6□□□□□ -0.07
NUDCD3-201ENST00000338427 MCL1Q07820 350 aa14.6□□□□□ -0.07
NUDCD3-201ENST00000338427 NOLC1Q14978 699 aaKnown RBP eCLIP14.6□□□□□ -0.07
NUDCD3-201ENST00000338427 ZC2HC1CQ53FD0 456 aaPredicted RBP14.6□□□□□ -0.07
NUDCD3-201ENST00000338427 LIN9Q5TKA1 542 aa14.6□□□□□ -0.07
NUDCD3-201ENST00000338427 ELMSAN1Q6PJG2 1045 aa14.6□□□□□ -0.07
NUDCD3-201ENST00000338427 ING5Q8WYH8 240 aa14.6□□□□□ -0.07
NUDCD3-201ENST00000338427 RAD54LQ92698 747 aa14.6□□□□□ -0.07
NUDCD3-201ENST00000338427 STAMQ92783 540 aa14.6□□□□□ -0.07
NUDCD3-201ENST00000338427 ATOH1Q92858 354 aaPredicted RBP14.6□□□□□ -0.07
NUDCD3-201ENST00000338427 FGF14Q92915 247 aa14.6□□□□□ -0.07
NUDCD3-201ENST00000338427 TBX20Q9UMR3 447 aa14.6□□□□□ -0.07
NUDCD3-201ENST00000338427 BACE2Q9Y5Z0 518 aa14.6□□□□□ -0.07
NUDCD3-201ENST00000338427 NUMBLQ9Y6R0 609 aa14.6□□□□□ -0.07
NUDCD3-201ENST00000338427 WDR27A2RRH5 827 aa14.59□□□□□ -0.07
NUDCD3-201ENST00000338427 ANHXE9PGG2 379 aa14.59□□□□□ -0.07
NUDCD3-201ENST00000338427 PPEF2O14830 753 aa14.59□□□□□ -0.07
NUDCD3-201ENST00000338427 GALR2O43603 387 aaPredicted RBP14.59□□□□□ -0.07
NUDCD3-201ENST00000338427 FAM13AO94988 1023 aa14.59□□□□□ -0.07
NUDCD3-201ENST00000338427 SYT1P21579 422 aa14.59□□□□□ -0.07
NUDCD3-201ENST00000338427 RESTQ13127 1097 aa14.59□□□□□ -0.07
NUDCD3-201ENST00000338427 MRPL58Q14197 206 aaKnown RBP14.59□□□□□ -0.07
NUDCD3-201ENST00000338427 SLC39A4Q6P5W5 647 aa14.59□□□□□ -0.07
NUDCD3-201ENST00000338427 ZPBP2Q6X784 338 aa14.59□□□□□ -0.07
NUDCD3-201ENST00000338427 DYMQ7RTS9 669 aa14.59□□□□□ -0.07
NUDCD3-201ENST00000338427 GPR152Q8TDT2 470 aa14.59□□□□□ -0.07
NUDCD3-201ENST00000338427 FGF13Q92913 245 aa14.59□□□□□ -0.07
NUDCD3-201ENST00000338427 FAM212AQ96EL1 285 aa14.59□□□□□ -0.07
NUDCD3-201ENST00000338427 MCRS1Q96EZ8 462 aa14.59□□□□□ -0.07
NUDCD3-201ENST00000338427 BICD1Q96G01 975 aa14.59□□□□□ -0.07
NUDCD3-201ENST00000338427 AK8Q96MA6 479 aa14.59□□□□□ -0.07
NUDCD3-201ENST00000338427 FIZ1Q96SL8 496 aa14.59□□□□□ -0.07
NUDCD3-201ENST00000338427 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.59□□□□□ -0.07
NUDCD3-201ENST00000338427 FBXL5Q9UKA1 691 aa14.59□□□□□ -0.07
NUDCD3-201ENST00000338427 NUB1Q9Y5A7 615 aa14.59□□□□□ -0.07
NUDCD3-201ENST00000338427 TTC26A0AVF1 554 aa14.58□□□□□ -0.08
NUDCD3-201ENST00000338427 TRAPPC3O43617 180 aa14.58□□□□□ -0.08
NUDCD3-201ENST00000338427 TRAK2O60296 914 aa14.58□□□□□ -0.08
NUDCD3-201ENST00000338427 ABLIM3O94929 683 aa14.58□□□□□ -0.08
NUDCD3-201ENST00000338427 KRT18P05783 430 aaKnown RBP14.58□□□□□ -0.08
NUDCD3-201ENST00000338427 HNRNPA1P09651 372 aaKnown RBP eCLIP14.58□□□□□ -0.08
NUDCD3-201ENST00000338427 RPL9P32969 192 aaKnown RBP14.58□□□□□ -0.08
NUDCD3-201ENST00000338427 DDIT3P35638 169 aa14.58□□□□□ -0.08
NUDCD3-201ENST00000338427 LONP1P36776 959 aaKnown RBP14.58□□□□□ -0.08
NUDCD3-201ENST00000338427 CLCN5P51795 746 aa14.58□□□□□ -0.08
NUDCD3-201ENST00000338427 GPC5P78333 572 aa14.58□□□□□ -0.08
NUDCD3-201ENST00000338427 ROR1Q01973 937 aa14.58□□□□□ -0.08
NUDCD3-201ENST00000338427 HTR4Q13639 388 aa14.58□□□□□ -0.08
NUDCD3-201ENST00000338427 ZBTB6Q15916 424 aa14.58□□□□□ -0.08
NUDCD3-201ENST00000338427 ENOX2Q16206 610 aaKnown RBP14.58□□□□□ -0.08
NUDCD3-201ENST00000338427 ANKS3Q6ZW76 656 aa14.58□□□□□ -0.08
NUDCD3-201ENST00000338427 BRAPQ7Z569 592 aa14.58□□□□□ -0.08
NUDCD3-201ENST00000338427 RASSF8Q8NHQ8 419 aa14.58□□□□□ -0.08
NUDCD3-201ENST00000338427 DDX12PQ92771 950 aa14.58□□□□□ -0.08
NUDCD3-201ENST00000338427 KIF12Q96FN5 646 aa14.58□□□□□ -0.08
NUDCD3-201ENST00000338427 BACH2Q9BYV9 841 aa14.58□□□□□ -0.08
NUDCD3-201ENST00000338427 PLA2G2FQ9BZM2 168 aa14.58□□□□□ -0.08
NUDCD3-201ENST00000338427 SLC38A7Q9NVC3 462 aa14.58□□□□□ -0.08
NUDCD3-201ENST00000338427 LARSQ9P2J5 1176 aaKnown RBP14.58□□□□□ -0.08
NUDCD3-201ENST00000338427 FBXO2Q9UK22 296 aaPredicted RBP14.58□□□□□ -0.08
NUDCD3-201ENST00000338427 CDH7Q9ULB5 785 aa14.58□□□□□ -0.08
NUDCD3-201ENST00000338427 CITO14578 2027 aa14.58□□□□□ -0.08
NUDCD3-201ENST00000338427 K7ENM7 598 aa14.57□□□□□ -0.08
NUDCD3-201ENST00000338427 FAM189A1O60320 539 aa14.57□□□□□ -0.08
NUDCD3-201ENST00000338427 LRRN2O75325 713 aa14.57□□□□□ -0.08
NUDCD3-201ENST00000338427 CLTAP09496 248 aa14.57□□□□□ -0.08
NUDCD3-201ENST00000338427 MCM4P33991 863 aa14.57□□□□□ -0.08
NUDCD3-201ENST00000338427 LIG4P49917 911 aa14.57□□□□□ -0.08
NUDCD3-201ENST00000338427 ZNF131P52739 623 aa14.57□□□□□ -0.08
NUDCD3-201ENST00000338427 SLC5A9Q2M3M2 681 aa14.57□□□□□ -0.08
NUDCD3-201ENST00000338427 UVSSAQ2YD98 709 aa14.57□□□□□ -0.08
NUDCD3-201ENST00000338427 CTXN3Q4LDR2 81 aa14.57□□□□□ -0.08
NUDCD3-201ENST00000338427 PDXDC1Q6P996 788 aa14.57□□□□□ -0.08
NUDCD3-201ENST00000338427 HS6ST3Q8IZP7 471 aa14.57□□□□□ -0.08
NUDCD3-201ENST00000338427 KCTD17Q8N5Z5 321 aa14.57□□□□□ -0.08
NUDCD3-201ENST00000338427 ZNF461Q8TAF7 563 aa14.57□□□□□ -0.08
NUDCD3-201ENST00000338427 TCEAL4Q96EI5 215 aa14.57□□□□□ -0.08
NUDCD3-201ENST00000338427 SUSD3Q96L08 255 aa14.57□□□□□ -0.08
NUDCD3-201ENST00000338427 PRRX2Q99811 253 aa14.57□□□□□ -0.08
NUDCD3-201ENST00000338427 CCSER1Q9C0I3 900 aa14.57□□□□□ -0.08
NUDCD3-201ENST00000338427 CYP4F11Q9HBI6 524 aa14.57□□□□□ -0.08
NUDCD3-201ENST00000338427 KCND2Q9NZV8 630 aa14.57□□□□□ -0.08
NUDCD3-201ENST00000338427 TBC1D7Q9P0N9 293 aa14.57□□□□□ -0.08
NUDCD3-201ENST00000338427 WNT16Q9UBV4 365 aa14.57□□□□□ -0.08
NUDCD3-201ENST00000338427 KCNG1Q9UIX4 513 aa14.57□□□□□ -0.08
NUDCD3-201ENST00000338427 ODF2LQ9ULJ1 636 aa14.57□□□□□ -0.08
NUDCD3-201ENST00000338427 MYMKA6NI61 221 aa14.56□□□□□ -0.08
NUDCD3-201ENST00000338427 XYLBO75191 536 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 151.8 ms