RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 OR6J1Q8NGC5 347 aa6.68□□□□□ -1.34
PRKDC-202ENST00000338368 ELAC2Q9BQ52 826 aaKnown RBP6.68□□□□□ -1.34
PRKDC-202ENST00000338368 ATP11AP98196 1134 aa6.67□□□□□ -1.34
PRKDC-202ENST00000338368 CYP24A1Q07973 514 aa6.67□□□□□ -1.34
PRKDC-202ENST00000338368 CCDC197Q8NCU1 140 aa6.67□□□□□ -1.34
PRKDC-202ENST00000338368 PIN4Q9Y237 131 aaKnown RBP6.67□□□□□ -1.34
PRKDC-202ENST00000338368 DDX3XO00571 662 aaKnown RBP eCLIP6.67□□□□□ -1.349e-17■■■■■ 34.1
PRKDC-202ENST00000338368 CYP2B6P20813 491 aa6.67□□□□□ -1.34
PRKDC-202ENST00000338368 MARSP56192 900 aaKnown RBP6.67□□□□□ -1.34
PRKDC-202ENST00000338368 LY6KQ17RY6 165 aa6.67□□□□□ -1.34
PRKDC-202ENST00000338368 BTBD6Q96KE9 485 aa6.67□□□□□ -1.34
PRKDC-202ENST00000338368 HEY1Q9Y5J3 304 aa6.67□□□□□ -1.34
PRKDC-202ENST00000338368 MICAL3Q7RTP6 2002 aa6.67□□□□□ -1.34
PRKDC-202ENST00000338368 PDE1BQ01064 536 aa6.67□□□□□ -1.34
PRKDC-202ENST00000338368 CATSPERGQ6ZRH7 1159 aa6.67□□□□□ -1.34
PRKDC-202ENST00000338368 EFCAB13Q8IY85 973 aa6.67□□□□□ -1.34
PRKDC-202ENST00000338368 GTF3C2Q8WUA4 911 aaPredicted RBP6.67□□□□□ -1.34
PRKDC-202ENST00000338368 SNF8Q96H20 258 aa6.67□□□□□ -1.34
PRKDC-202ENST00000338368 HNRNPH3P31942 346 aaKnown RBP6.67□□□□□ -1.34
PRKDC-202ENST00000338368 SLC26A2P50443 739 aa6.67□□□□□ -1.34
PRKDC-202ENST00000338368 TMEM132BQ14DG7 1078 aa6.67□□□□□ -1.34
PRKDC-202ENST00000338368 MPZL3Q6UWV2 235 aa6.67□□□□□ -1.34
PRKDC-202ENST00000338368 CYFIP2Q96F07 1278 aa6.67□□□□□ -1.34
PRKDC-202ENST00000338368 RILPQ96NA2 401 aa6.67□□□□□ -1.34
PRKDC-202ENST00000338368 ZIM3Q96PE6 472 aa6.67□□□□□ -1.34
PRKDC-202ENST00000338368 KLC2Q9H0B6 622 aa6.67□□□□□ -1.34
PRKDC-202ENST00000338368 RAB21Q9UL25 225 aa6.67□□□□□ -1.34
PRKDC-202ENST00000338368 RCCD1A6NED2 376 aa6.67□□□□□ -1.34
PRKDC-202ENST00000338368 PPP1R37O75864 691 aa6.67□□□□□ -1.34
PRKDC-202ENST00000338368 BCAR1P56945 870 aa6.67□□□□□ -1.34
PRKDC-202ENST00000338368 PPP2R2AP63151 447 aa6.67□□□□□ -1.34
PRKDC-202ENST00000338368 GCNT1Q02742 428 aa6.67□□□□□ -1.34
PRKDC-202ENST00000338368 ITGB3BPQ13352 177 aaPredicted RBP6.67□□□□□ -1.34
PRKDC-202ENST00000338368 KYAT1Q16773 422 aa6.67□□□□□ -1.34
PRKDC-202ENST00000338368 POTEAQ6S8J7 498 aa6.67□□□□□ -1.34
PRKDC-202ENST00000338368 TNIP3Q96KP6 325 aa6.67□□□□□ -1.34
PRKDC-202ENST00000338368 I3L4J1 428 aa6.67□□□□□ -1.34
PRKDC-202ENST00000338368 RASSF2P50749 326 aa6.67□□□□□ -1.34
PRKDC-202ENST00000338368 GTF2BQ00403 316 aa6.67□□□□□ -1.34
PRKDC-202ENST00000338368 TMEM62Q0P6H9 643 aa6.67□□□□□ -1.34
PRKDC-202ENST00000338368 FAM47EQ6ZV65 393 aa6.67□□□□□ -1.34
PRKDC-202ENST00000338368 VAV3Q9UKW4 847 aa6.67□□□□□ -1.34
PRKDC-202ENST00000338368 SSX2IPQ9Y2D8 614 aa6.67□□□□□ -1.34
PRKDC-202ENST00000338368 REXO2Q9Y3B8 237 aaKnown RBP6.67□□□□□ -1.34
PRKDC-202ENST00000338368 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.67□□□□□ -1.34
PRKDC-202ENST00000338368 SUN1O94901 812 aa6.67□□□□□ -1.34
PRKDC-202ENST00000338368 ZNF131P52739 623 aa6.67□□□□□ -1.34
PRKDC-202ENST00000338368 CCDC60Q8IWA6 550 aaPredicted RBP6.67□□□□□ -1.34
PRKDC-202ENST00000338368 FEZF2Q8TBJ5 459 aa6.67□□□□□ -1.34
PRKDC-202ENST00000338368 ELMO3Q96BJ8 720 aa6.67□□□□□ -1.34
PRKDC-202ENST00000338368 PURBQ96QR8 312 aaKnown RBP6.67□□□□□ -1.34
PRKDC-202ENST00000338368 ASTN2O75129 1339 aaPredicted RBP6.67□□□□□ -1.34
PRKDC-202ENST00000338368 CYP2C19P33261 490 aa6.67□□□□□ -1.34
PRKDC-202ENST00000338368 DLG4P78352 724 aa6.67□□□□□ -1.34
PRKDC-202ENST00000338368 PPATQ06203 517 aa6.67□□□□□ -1.34
PRKDC-202ENST00000338368 SRRM1Q8IYB3 904 aaKnown RBP6.67□□□□□ -1.34
PRKDC-202ENST00000338368 VPS52Q8N1B4 723 aa6.67□□□□□ -1.34
PRKDC-202ENST00000338368 ZNF560Q96MR9 790 aa6.67□□□□□ -1.34
PRKDC-202ENST00000338368 OSBPL8Q9BZF1 889 aa6.67□□□□□ -1.34
PRKDC-202ENST00000338368 IKZF4Q9H2S9 585 aa6.67□□□□□ -1.34
PRKDC-202ENST00000338368 PCDHGC5Q9Y5F6 944 aa6.67□□□□□ -1.34
PRKDC-202ENST00000338368 M0R2N6 131 aa6.67□□□□□ -1.34
PRKDC-202ENST00000338368 RRM1P23921 792 aa6.67□□□□□ -1.34
PRKDC-202ENST00000338368 PDIA2Q13087 525 aaKnown RBP6.67□□□□□ -1.34
PRKDC-202ENST00000338368 CPP00450 1065 aa6.67□□□□□ -1.34
PRKDC-202ENST00000338368 ZPBP2Q6X784 338 aa6.67□□□□□ -1.34
PRKDC-202ENST00000338368 PCGF5Q86SE9 256 aa6.67□□□□□ -1.34
PRKDC-202ENST00000338368 DNAAF3Q8N9W5 541 aa6.67□□□□□ -1.34
PRKDC-202ENST00000338368 AFDNP55196 1824 aaKnown RBP6.67□□□□□ -1.34
PRKDC-202ENST00000338368 MDH1P40925 334 aaKnown RBP6.66□□□□□ -1.34
PRKDC-202ENST00000338368 HSD17B4P51659 736 aa6.66□□□□□ -1.34
PRKDC-202ENST00000338368 ARSEP51690 589 aa6.66□□□□□ -1.34
PRKDC-202ENST00000338368 CDH6P55285 790 aa6.66□□□□□ -1.34
PRKDC-202ENST00000338368 GPAT2Q6NUI2 795 aa6.66□□□□□ -1.34
PRKDC-202ENST00000338368 SLC47A2Q86VL8 602 aa6.66□□□□□ -1.34
PRKDC-202ENST00000338368 RCOR2Q8IZ40 523 aa6.66□□□□□ -1.34
PRKDC-202ENST00000338368 ATP8B4Q8TF62 1192 aa6.66□□□□□ -1.34
PRKDC-202ENST00000338368 HDAC7Q8WUI4 952 aa6.66□□□□□ -1.34
PRKDC-202ENST00000338368 FAM118BQ9BPY3 351 aa6.66□□□□□ -1.34
PRKDC-202ENST00000338368 MKRN4PQ13434 485 aaPredicted RBP6.66□□□□□ -1.34
PRKDC-202ENST00000338368 PSMD6Q15008 389 aa6.66□□□□□ -1.34
PRKDC-202ENST00000338368 BMT2Q1RMZ1 405 aa6.66□□□□□ -1.34
PRKDC-202ENST00000338368 SPOPLQ6IQ16 392 aa6.66□□□□□ -1.34
PRKDC-202ENST00000338368 ANO5Q75V66 913 aa6.66□□□□□ -1.34
PRKDC-202ENST00000338368 DHX38Q92620 1227 aaKnown RBP6.66□□□□□ -1.34
PRKDC-202ENST00000338368 ZBTB45Q96K62 511 aaPredicted RBP6.66□□□□□ -1.34
PRKDC-202ENST00000338368 ZSWIM1Q9BR11 485 aa6.66□□□□□ -1.34
PRKDC-202ENST00000338368 CYP11B1P15538 503 aa6.66□□□□□ -1.34
PRKDC-202ENST00000338368 HUNKP57058 714 aa6.66□□□□□ -1.34
PRKDC-202ENST00000338368 ACTRT1Q8TDG2 376 aa6.66□□□□□ -1.34
PRKDC-202ENST00000338368 ARHGEF2Q92974 986 aaKnown RBP6.66□□□□□ -1.34
PRKDC-202ENST00000338368 PABPN1LA6NDY0 278 aaKnown RBP6.66□□□□□ -1.34
PRKDC-202ENST00000338368 GRIN3BO60391 1043 aa6.66□□□□□ -1.34
PRKDC-202ENST00000338368 EPHX2P34913 555 aa6.66□□□□□ -1.34
PRKDC-202ENST00000338368 GPS1Q13098 491 aa6.66□□□□□ -1.34
PRKDC-202ENST00000338368 KYNUQ16719 465 aa6.66□□□□□ -1.34
PRKDC-202ENST00000338368 C1orf131Q8NDD1 294 aaKnown RBP6.66□□□□□ -1.34
PRKDC-202ENST00000338368 MCEEQ96PE7 176 aa6.66□□□□□ -1.34
PRKDC-202ENST00000338368 CGRRF1Q99675 332 aa6.66□□□□□ -1.34
PRKDC-202ENST00000338368 BRD2P25440 801 aaKnown RBP6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms