RNA–Protein interactions for RNA: ENST00000330374.6

VMA21-201, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMA21, Length 4,717 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-201ENST00000330374 ZNF720Q7Z2F6 126 aa8.38□□□□□ -1.07
VMA21-201ENST00000330374 DNAJC9Q8WXX5 260 aa8.38□□□□□ -1.07
VMA21-201ENST00000330374 LENG9Q96B70 501 aa8.38□□□□□ -1.07
VMA21-201ENST00000330374 DENND2DQ9H6A0 471 aaPredicted RBP8.38□□□□□ -1.07
VMA21-201ENST00000330374 TP73O15350 636 aa8.38□□□□□ -1.07
VMA21-201ENST00000330374 TPD52L2O43399 206 aaKnown RBP8.38□□□□□ -1.07
VMA21-201ENST00000330374 BANF1O75531 89 aa8.38□□□□□ -1.07
VMA21-201ENST00000330374 ZSCAN5DPP0CG00 497 aa8.38□□□□□ -1.07
VMA21-201ENST00000330374 YY1P25490 414 aa8.38□□□□□ -1.07
VMA21-201ENST00000330374 SHMT1P34896 483 aa8.38□□□□□ -1.07
VMA21-201ENST00000330374 RBBP5Q15291 538 aaKnown RBP8.38□□□□□ -1.07
VMA21-201ENST00000330374 PKN2Q16513 984 aaKnown RBP8.38□□□□□ -1.07
VMA21-201ENST00000330374 NBPF20Q3BBV1 942 aa8.38□□□□□ -1.07
VMA21-201ENST00000330374 TNFAIP8L3Q5GJ75 292 aa8.38□□□□□ -1.07
VMA21-201ENST00000330374 MTDHQ86UE4 582 aaKnown RBP8.38□□□□□ -1.07
VMA21-201ENST00000330374 ZC3H18Q86VM9 953 aaKnown RBP8.38□□□□□ -1.07
VMA21-201ENST00000330374 NAP1L4Q99733 375 aaKnown RBP8.38□□□□□ -1.07
VMA21-201ENST00000330374 PAPOLBQ9NRJ5 636 aaKnown RBP8.38□□□□□ -1.07
VMA21-201ENST00000330374 CYP39A1Q9NYL5 469 aa8.38□□□□□ -1.07
VMA21-201ENST00000330374 GGA1Q9UJY5 639 aa8.38□□□□□ -1.07
VMA21-201ENST00000330374 A0A0G2JND7 137 aa8.38□□□□□ -1.07
VMA21-201ENST00000330374 CFAP69A5D8W1 941 aa8.38□□□□□ -1.07
VMA21-201ENST00000330374 PI4K2BG5E9Z4 385 aa8.38□□□□□ -1.07
VMA21-201ENST00000330374 KIF3CO14782 793 aa8.38□□□□□ -1.07
VMA21-201ENST00000330374 CDH16O75309 829 aa8.38□□□□□ -1.07
VMA21-201ENST00000330374 SLITRK3O94933 977 aa8.38□□□□□ -1.07
VMA21-201ENST00000330374 FDX1P10109 184 aa8.38□□□□□ -1.07
VMA21-201ENST00000330374 CD58P19256 250 aa8.38□□□□□ -1.07
VMA21-201ENST00000330374 ALDH3A1P30838 453 aa8.38□□□□□ -1.07
VMA21-201ENST00000330374 RPA3P35244 121 aaPredicted RBP8.38□□□□□ -1.07
VMA21-201ENST00000330374 GRAPQ13588 217 aa8.38□□□□□ -1.07
VMA21-201ENST00000330374 RCN2Q14257 317 aa8.38□□□□□ -1.07
VMA21-201ENST00000330374 CLUL1Q15846 466 aa8.38□□□□□ -1.07
VMA21-201ENST00000330374 SEPT7Q16181 437 aaKnown RBP8.38□□□□□ -1.07
VMA21-201ENST00000330374 OXLD1Q5BKU9 147 aa8.38□□□□□ -1.07
VMA21-201ENST00000330374 FBXO11Q86XK2 927 aa8.38□□□□□ -1.07
VMA21-201ENST00000330374 GRAPLQ8TC17 118 aaPredicted RBP8.38□□□□□ -1.07
VMA21-201ENST00000330374 EPS8L1Q8TE68 723 aa8.38□□□□□ -1.07
VMA21-201ENST00000330374 CPA5Q8WXQ8 436 aa8.38□□□□□ -1.07
VMA21-201ENST00000330374 RBM15Q96T37 977 aaKnown RBP eCLIP8.38□□□□□ -1.07
VMA21-201ENST00000330374 LIMD1Q9UGP4 676 aa8.38□□□□□ -1.07
VMA21-201ENST00000330374 NAV1Q8NEY1 1877 aa8.37□□□□□ -1.07
VMA21-201ENST00000330374 FRMPD4Q14CM0 1322 aa8.37□□□□□ -1.07
VMA21-201ENST00000330374 COL22A1Q8NFW1 1626 aaPredicted RBP8.37□□□□□ -1.07
VMA21-201ENST00000330374 RALAP11233 206 aa8.37□□□□□ -1.07
VMA21-201ENST00000330374 GAP43P17677 238 aa8.37□□□□□ -1.07
VMA21-201ENST00000330374 ITIH2P19823 946 aa8.37□□□□□ -1.07
VMA21-201ENST00000330374 VAMP7P51809 220 aa8.37□□□□□ -1.07
VMA21-201ENST00000330374 RBM5P52756 815 aaKnown RBP eCLIP8.37□□□□□ -1.07
VMA21-201ENST00000330374 FASTKD3Q14CZ7 662 aaKnown RBP8.37□□□□□ -1.07
VMA21-201ENST00000330374 BMT2Q1RMZ1 405 aa8.37□□□□□ -1.07
VMA21-201ENST00000330374 PPP1R21Q6ZMI0 780 aa8.37□□□□□ -1.07
VMA21-201ENST00000330374 ANKRD35Q8N283 1001 aa8.37□□□□□ -1.07
VMA21-201ENST00000330374 TRABDQ9H4I3 376 aa8.37□□□□□ -1.07
VMA21-201ENST00000330374 WRAP73Q9P2S5 460 aaPredicted RBP8.37□□□□□ -1.07
VMA21-201ENST00000330374 ZFP69BQ9UJL9 534 aa8.37□□□□□ -1.07
VMA21-201ENST00000330374 DDX60LQ5H9U9 1706 aaKnown RBP8.37□□□□□ -1.07
VMA21-201ENST00000330374 STRCP1A6NGW2 1772 aa8.37□□□□□ -1.07
VMA21-201ENST00000330374 ARHGEF35A5YM69 484 aa8.37□□□□□ -1.07
VMA21-201ENST00000330374 TMEM150BA6NC51 233 aa8.37□□□□□ -1.07
VMA21-201ENST00000330374 SNUPNO95149 360 aaKnown RBP8.37□□□□□ -1.07
VMA21-201ENST00000330374 PLS3P13797 630 aa8.37□□□□□ -1.07
VMA21-201ENST00000330374 CCNB1P14635 433 aa8.37□□□□□ -1.07
VMA21-201ENST00000330374 RASA3Q14644 834 aa8.37□□□□□ -1.07
VMA21-201ENST00000330374 DOK7Q18PE1 504 aa8.37□□□□□ -1.07
VMA21-201ENST00000330374 P3H1Q32P28 736 aa8.37□□□□□ -1.07
VMA21-201ENST00000330374 RNF43Q68DV7 783 aa8.37□□□□□ -1.07
VMA21-201ENST00000330374 C1orf186Q6ZWK4 172 aa8.37□□□□□ -1.07
VMA21-201ENST00000330374 ANKMY2Q8IV38 441 aa8.37□□□□□ -1.07
VMA21-201ENST00000330374 PASD1Q8IV76 773 aa8.37□□□□□ -1.07
VMA21-201ENST00000330374 SCYL3Q8IZE3 742 aa8.37□□□□□ -1.07
VMA21-201ENST00000330374 PI4K2AQ9BTU6 479 aa8.37□□□□□ -1.07
VMA21-201ENST00000330374 AMNQ9BXJ7 453 aa8.37□□□□□ -1.07
VMA21-201ENST00000330374 TMEM117Q9H0C3 514 aa8.37□□□□□ -1.07
VMA21-201ENST00000330374 TOPORSQ9NS56 1045 aaPredicted RBP8.37□□□□□ -1.07
VMA21-201ENST00000330374 VAV3Q9UKW4 847 aa8.37□□□□□ -1.07
VMA21-201ENST00000330374 C2CD2Q9Y426 696 aa8.37□□□□□ -1.07
VMA21-201ENST00000330374 PCDHAC2Q9Y5I4 1007 aa8.37□□□□□ -1.07
VMA21-201ENST00000330374 USH1CQ9Y6N9 552 aa8.37□□□□□ -1.07
VMA21-201ENST00000330374 MYH11P35749 1972 aa8.37□□□□□ -1.07
VMA21-201ENST00000330374 A0A1W2PPM1 405 aa8.37□□□□□ -1.07
VMA21-201ENST00000330374 GAS7O60861 476 aa8.37□□□□□ -1.07
VMA21-201ENST00000330374 IFNB1P01574 187 aa8.37□□□□□ -1.07
VMA21-201ENST00000330374 ETS1P14921 441 aa8.37□□□□□ -1.07
VMA21-201ENST00000330374 MXI1P50539 228 aa8.37□□□□□ -1.07
VMA21-201ENST00000330374 PAPOLAP51003 745 aaKnown RBP8.37□□□□□ -1.07
VMA21-201ENST00000330374 ZBTB16Q05516 673 aa8.37□□□□□ -1.07
VMA21-201ENST00000330374 RCN1Q15293 331 aa8.37□□□□□ -1.07
VMA21-201ENST00000330374 KHDC1Q4VXA5 237 aaKnown RBP8.37□□□□□ -1.07
VMA21-201ENST00000330374 CCDC174Q6PII3 467 aa8.37□□□□□ -1.07
VMA21-201ENST00000330374 DDX50Q9BQ39 737 aaKnown RBP8.37□□□□□ -1.07
VMA21-201ENST00000330374 OLFML3Q9NRN5 406 aa8.37□□□□□ -1.07
VMA21-201ENST00000330374 WHRNQ9P202 907 aa8.37□□□□□ -1.07
VMA21-201ENST00000330374 GRID1Q9ULK0 1009 aa8.37□□□□□ -1.07
VMA21-201ENST00000330374 C2orf71A6NGG8 1288 aa8.37□□□□□ -1.07
VMA21-201ENST00000330374 A6NHS1 94 aa8.37□□□□□ -1.07
VMA21-201ENST00000330374 UNCXA6NJT0 531 aa8.37□□□□□ -1.07
VMA21-201ENST00000330374 GGPS1O95749 300 aa8.37□□□□□ -1.07
VMA21-201ENST00000330374 CPA2P48052 419 aa8.37□□□□□ -1.07
VMA21-201ENST00000330374 KLC1Q07866 573 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms