RNA–Protein interactions for RNA: ENST00000328642.11

SYNM-201, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 3,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-201ENST00000328642 TNFSF9P41273 254 aa17.02■□□□□ 0.32
SYNM-201ENST00000328642 CACNB2Q08289 660 aaPredicted RBP17.02■□□□□ 0.32
SYNM-201ENST00000328642 GPC2Q8N158 579 aa17.02■□□□□ 0.32
SYNM-201ENST00000328642 GANQ9H2C0 597 aa17.02■□□□□ 0.32
SYNM-201ENST00000328642 ERAP1Q9NZ08 941 aa17.02■□□□□ 0.32
SYNM-201ENST00000328642 CCDC78A2IDD5 438 aa17.02■□□□□ 0.32
SYNM-201ENST00000328642 EZRP15311 586 aaKnown RBP17.02■□□□□ 0.32
SYNM-201ENST00000328642 HOXA7P31268 230 aaPredicted RBP17.02■□□□□ 0.32
SYNM-201ENST00000328642 EFNA5P52803 228 aa17.02■□□□□ 0.32
SYNM-201ENST00000328642 CDH6P55285 790 aa17.02■□□□□ 0.32
SYNM-201ENST00000328642 FBF1Q8TES7 1133 aa17.02■□□□□ 0.32
SYNM-201ENST00000328642 TELO2Q9Y4R8 837 aa17.02■□□□□ 0.32
SYNM-201ENST00000328642 MARF1Q9Y4F3 1742 aaKnown RBP17.02■□□□□ 0.31
SYNM-201ENST00000328642 CREB3O43889 395 aa17.02■□□□□ 0.31
SYNM-201ENST00000328642 RNASELQ05823 741 aaKnown RBP17.02■□□□□ 0.31
SYNM-201ENST00000328642 LAMTOR4Q0VGL1 99 aa17.02■□□□□ 0.31
SYNM-201ENST00000328642 NME3Q13232 169 aa17.02■□□□□ 0.31
SYNM-201ENST00000328642 KYNUQ16719 465 aa17.02■□□□□ 0.31
SYNM-201ENST00000328642 JAMLQ86YT9 394 aa17.02■□□□□ 0.31
SYNM-201ENST00000328642 OSMRQ99650 979 aa17.02■□□□□ 0.31
SYNM-201ENST00000328642 C10orf88Q9H8K7 445 aa17.02■□□□□ 0.31
SYNM-201ENST00000328642 ALG13Q9NP73 1137 aaKnown RBP17.02■□□□□ 0.31
SYNM-201ENST00000328642 IQCA1LA6NCM1 817 aa17.01■□□□□ 0.31
SYNM-201ENST00000328642 GOLGA8RI6L899 631 aa17.01■□□□□ 0.31
SYNM-201ENST00000328642 PFASO15067 1338 aa17.01■□□□□ 0.31
SYNM-201ENST00000328642 MCF2LO15068 1137 aa17.01■□□□□ 0.31
SYNM-201ENST00000328642 CYP2C9P11712 490 aa17.01■□□□□ 0.31
SYNM-201ENST00000328642 PMS2P54278 862 aa17.01■□□□□ 0.31
SYNM-201ENST00000328642 CUL1Q13616 776 aa17.01■□□□□ 0.31
SYNM-201ENST00000328642 LONRF1Q17RB8 773 aa17.01■□□□□ 0.31
SYNM-201ENST00000328642 ZBTB41Q5SVQ8 909 aa17.01■□□□□ 0.31
SYNM-201ENST00000328642 TEX2Q8IWB9 1127 aa17.01■□□□□ 0.31
SYNM-201ENST00000328642 TMEM161BQ8NDZ6 487 aa17.01■□□□□ 0.31
SYNM-201ENST00000328642 MDM1Q8TC05 714 aa17.01■□□□□ 0.31
SYNM-201ENST00000328642 CLEC4DQ8WXI8 215 aa17.01■□□□□ 0.31
SYNM-201ENST00000328642 SYN2Q92777 582 aaPredicted RBP17.01■□□□□ 0.31
SYNM-201ENST00000328642 AJAP1Q9UKB5 411 aaPredicted RBP17.01■□□□□ 0.31
SYNM-201ENST00000328642 MED7O43513 233 aa17.01■□□□□ 0.31
SYNM-201ENST00000328642 CUL2Q13617 745 aa17.01■□□□□ 0.31
SYNM-201ENST00000328642 RHOT1Q8IXI2 618 aa17.01■□□□□ 0.31
SYNM-201ENST00000328642 CACNA2D3Q8IZS8 1091 aa17.01■□□□□ 0.31
SYNM-201ENST00000328642 LNX1Q8TBB1 728 aaPredicted RBP17.01■□□□□ 0.31
SYNM-201ENST00000328642 FBXO25Q8TCJ0 367 aa17.01■□□□□ 0.31
SYNM-201ENST00000328642 CFAP36Q96G28 342 aa17.01■□□□□ 0.31
SYNM-201ENST00000328642 SPEF2Q9C093 1822 aa17.01■□□□□ 0.31
SYNM-201ENST00000328642 PKD1L3Q7Z443 1732 aa17.01■□□□□ 0.31
SYNM-201ENST00000328642 FANCGO15287 622 aa17.01■□□□□ 0.31
SYNM-201ENST00000328642 ITKQ08881 620 aa17.01■□□□□ 0.31
SYNM-201ENST00000328642 FSTL1Q12841 308 aa17.01■□□□□ 0.31
SYNM-201ENST00000328642 DRP2Q13474 957 aa17.01■□□□□ 0.31
SYNM-201ENST00000328642 MXD4Q14582 209 aaPredicted RBP17.01■□□□□ 0.31
SYNM-201ENST00000328642 GLE1Q53GS7 698 aaKnown RBP17.01■□□□□ 0.31
SYNM-201ENST00000328642 GNASQ5JWF2 1037 aa17.01■□□□□ 0.31
SYNM-201ENST00000328642 ALS2CLQ60I27 953 aa17.01■□□□□ 0.31
SYNM-201ENST00000328642 IRF2BP2Q7Z5L9 587 aa17.01■□□□□ 0.31
SYNM-201ENST00000328642 OR5B17Q8NGF7 314 aa17.01■□□□□ 0.31
SYNM-201ENST00000328642 C2orf40Q9H1Z8 148 aa17.01■□□□□ 0.31
SYNM-201ENST00000328642 DHX35Q9H5Z1 703 aaKnown RBP17.01■□□□□ 0.31
SYNM-201ENST00000328642 HOMER3Q9NSC5 361 aa17.01■□□□□ 0.31
SYNM-201ENST00000328642 SCINQ9Y6U3 715 aa17.01■□□□□ 0.31
SYNM-201ENST00000328642 CASZ1Q86V15 1759 aa17■□□□□ 0.31
SYNM-201ENST00000328642 ZBTB22O15209 634 aa17■□□□□ 0.31
SYNM-201ENST00000328642 TBXAS1P24557 533 aaPredicted RBP17■□□□□ 0.31
SYNM-201ENST00000328642 PLCB4Q15147 1175 aa17■□□□□ 0.31
SYNM-201ENST00000328642 TRIM7Q9C029 511 aa17■□□□□ 0.31
SYNM-201ENST00000328642 RRP15Q9Y3B9 282 aaKnown RBP17■□□□□ 0.31
SYNM-201ENST00000328642 CICQ96RK0 1608 aaPredicted RBP17■□□□□ 0.31
SYNM-201ENST00000328642 AKAP11Q9UKA4 1901 aa17■□□□□ 0.31
SYNM-201ENST00000328642 PDHXO00330 501 aa17■□□□□ 0.31
SYNM-201ENST00000328642 B4GALT5O43286 388 aa17■□□□□ 0.31
SYNM-201ENST00000328642 ZNF131P52739 623 aa17■□□□□ 0.31
SYNM-201ENST00000328642 ITIH3Q06033 890 aa17■□□□□ 0.31
SYNM-201ENST00000328642 MEI1Q5TIA1 1274 aa17■□□□□ 0.31
SYNM-201ENST00000328642 IER5Q5VY09 327 aa17■□□□□ 0.31
SYNM-201ENST00000328642 PRUNE1Q86TP1 453 aa17■□□□□ 0.31
SYNM-201ENST00000328642 SEMA4DQ92854 862 aa17■□□□□ 0.31
SYNM-201ENST00000328642 ELAC2Q9BQ52 826 aaKnown RBP17■□□□□ 0.31
SYNM-201ENST00000328642 NUP188Q5SRE5 1749 aa17■□□□□ 0.31
SYNM-201ENST00000328642 SPAG7O75391 227 aa17■□□□□ 0.31
SYNM-201ENST00000328642 GH1P01241 217 aa17■□□□□ 0.31
SYNM-201ENST00000328642 SLC4A1P02730 911 aa17■□□□□ 0.31
SYNM-201ENST00000328642 PDGFRAP16234 1089 aa17■□□□□ 0.31
SYNM-201ENST00000328642 CDR2Q01850 454 aa17■□□□□ 0.31
SYNM-201ENST00000328642 FAXCQ5TGI0 409 aa17■□□□□ 0.31
SYNM-201ENST00000328642 MAP7D3Q8IWC1 876 aa17■□□□□ 0.31
SYNM-201ENST00000328642 SCN4BQ8IWT1 228 aa17■□□□□ 0.31
SYNM-201ENST00000328642 POLIQ9UNA4 740 aa17■□□□□ 0.31
SYNM-201ENST00000328642 ARSEP51690 589 aa16.99■□□□□ 0.31
SYNM-201ENST00000328642 FAM133BQ5BKY9 247 aaKnown RBP16.99■□□□□ 0.31
SYNM-201ENST00000328642 KLF6Q99612 283 aaPredicted RBP16.99■□□□□ 0.31
SYNM-201ENST00000328642 OSBPL8Q9BZF1 889 aa16.99■□□□□ 0.31
SYNM-201ENST00000328642 SIK2Q9H0K1 926 aa16.99■□□□□ 0.31
SYNM-201ENST00000328642 BAIAP2L1Q9UHR4 511 aa16.99■□□□□ 0.31
SYNM-201ENST00000328642 MYH10P35580 1976 aa16.99■□□□□ 0.31
SYNM-201ENST00000328642 H3BRB1 525 aa16.99■□□□□ 0.31
SYNM-201ENST00000328642 GLRA2P23416 452 aa16.99■□□□□ 0.31
SYNM-201ENST00000328642 AKAP5P24588 427 aa16.99■□□□□ 0.31
SYNM-201ENST00000328642 ADORA2AP29274 412 aa16.99■□□□□ 0.31
SYNM-201ENST00000328642 CYP2C19P33261 490 aa16.99■□□□□ 0.31
SYNM-201ENST00000328642 TMEM132DQ14C87 1099 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms