RNA–Protein interactions for RNA: ENST00000328495.9

CCDC144A-201, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2

Gene CCDC144A, Length 3,375 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-201ENST00000328495 CCM2LQ9NUG4 571 aaPredicted RBP2.19□□□□□ -2.06
CCDC144A-201ENST00000328495 DNAJC28Q9NX36 388 aa2.19□□□□□ -2.06
CCDC144A-201ENST00000328495 GPRC5BQ9NZH0 403 aa2.19□□□□□ -2.06
CCDC144A-201ENST00000328495 FZD1Q9UP38 647 aa2.19□□□□□ -2.06
CCDC144A-201ENST00000328495 ABCA9Q8IUA7 1624 aa2.19□□□□□ -2.06
CCDC144A-201ENST00000328495 TDRD9Q8NDG6 1382 aaKnown RBP2.19□□□□□ -2.06
CCDC144A-201ENST00000328495 TMEM191CA6NGB0 347 aa2.19□□□□□ -2.06
CCDC144A-201ENST00000328495 DIRC3C9JPN6 131 aa2.19□□□□□ -2.06
CCDC144A-201ENST00000328495 SUV39H1O43463 412 aa2.19□□□□□ -2.06
CCDC144A-201ENST00000328495 ITGB1P05556 798 aa2.19□□□□□ -2.06
CCDC144A-201ENST00000328495 SPATA31D3P0C874 917 aa2.19□□□□□ -2.06
CCDC144A-201ENST00000328495 CANXP27824 592 aaKnown RBP2.19□□□□□ -2.06
CCDC144A-201ENST00000328495 APOBEC3AP31941 199 aaPredicted RBP2.19□□□□□ -2.06
CCDC144A-201ENST00000328495 PTPN7P35236 360 aa2.19□□□□□ -2.06
CCDC144A-201ENST00000328495 PER3P56645 1201 aa2.19□□□□□ -2.06
CCDC144A-201ENST00000328495 TIGD2Q4W5G0 525 aa2.19□□□□□ -2.06
CCDC144A-201ENST00000328495 LY6G5CQ5SRR4 150 aa2.19□□□□□ -2.06
CCDC144A-201ENST00000328495 PRAMEF14Q5SWL7 426 aa2.19□□□□□ -2.06
CCDC144A-201ENST00000328495 RNF187Q5TA31 235 aaPredicted RBP2.19□□□□□ -2.06
CCDC144A-201ENST00000328495 MBNL2Q5VZF2 373 aaKnown RBP2.19□□□□□ -2.06
CCDC144A-201ENST00000328495 KCNV1Q6PIU1 500 aa2.19□□□□□ -2.06
CCDC144A-201ENST00000328495 SPATA31D4Q6ZUB0 917 aa2.19□□□□□ -2.06
CCDC144A-201ENST00000328495 GPRIN1Q7Z2K8 1008 aa2.19□□□□□ -2.06
CCDC144A-201ENST00000328495 LILRA3Q8N6C8 439 aaPredicted RBP2.19□□□□□ -2.06
CCDC144A-201ENST00000328495 OR7D4Q8NG98 312 aa2.19□□□□□ -2.06
CCDC144A-201ENST00000328495 LARP4BQ92615 738 aaKnown RBP2.19□□□□□ -2.06
CCDC144A-201ENST00000328495 CHFRQ96EP1 664 aa2.19□□□□□ -2.06
CCDC144A-201ENST00000328495 ADI1Q9BV57 179 aa2.19□□□□□ -2.06
CCDC144A-201ENST00000328495 RBM12Q9NTZ6 932 aaKnown RBP2.19□□□□□ -2.06
CCDC144A-201ENST00000328495 TRPM5Q9NZQ8 1165 aa2.19□□□□□ -2.06
CCDC144A-201ENST00000328495 POGKQ9P215 609 aa2.19□□□□□ -2.06
CCDC144A-201ENST00000328495 ZMYM3Q14202 1370 aa2.19□□□□□ -2.06
CCDC144A-201ENST00000328495 A2ML1A8K2U0 1454 aa2.19□□□□□ -2.06
CCDC144A-201ENST00000328495 GAGE12BA1L429 117 aa2.19□□□□□ -2.06
CCDC144A-201ENST00000328495 GAGE12HA6NDE8 117 aa2.19□□□□□ -2.06
CCDC144A-201ENST00000328495 TBKBP1A7MCY6 615 aa2.19□□□□□ -2.06
CCDC144A-201ENST00000328495 PJA2O43164 708 aa2.19□□□□□ -2.06
CCDC144A-201ENST00000328495 ABHD16AO95870 558 aa2.19□□□□□ -2.06
CCDC144A-201ENST00000328495 SNRPA1P09661 255 aaKnown RBP2.19□□□□□ -2.06
CCDC144A-201ENST00000328495 RBP3P10745 1247 aa2.19□□□□□ -2.06
CCDC144A-201ENST00000328495 HSPA8P11142 646 aaKnown RBP2.19□□□□□ -2.06
CCDC144A-201ENST00000328495 LAG3P18627 525 aa2.19□□□□□ -2.06
CCDC144A-201ENST00000328495 ADSLP30566 484 aaPredicted RBP2.19□□□□□ -2.06
CCDC144A-201ENST00000328495 SRSF2Q01130 221 aaKnown RBP2.19□□□□□ -2.06
CCDC144A-201ENST00000328495 MALLQ13021 153 aa2.19□□□□□ -2.06
CCDC144A-201ENST00000328495 FAM47AQ5JRC9 791 aa2.19□□□□□ -2.06
CCDC144A-201ENST00000328495 LHFPL2Q6ZUX7 228 aa2.19□□□□□ -2.06
CCDC144A-201ENST00000328495 KCNK18Q7Z418 384 aa2.19□□□□□ -2.06
CCDC144A-201ENST00000328495 GDF7Q7Z4P5 450 aa2.19□□□□□ -2.06
CCDC144A-201ENST00000328495 MRGPRGQ86SM5 289 aa2.19□□□□□ -2.06
CCDC144A-201ENST00000328495 PLXDC1Q8IUK5 500 aa2.19□□□□□ -2.06
CCDC144A-201ENST00000328495 CMIPQ8IY22 773 aa2.19□□□□□ -2.06
CCDC144A-201ENST00000328495 TRMT2AQ8IZ69 625 aaKnown RBP2.19□□□□□ -2.06
CCDC144A-201ENST00000328495 PROKR1Q8TCW9 393 aa2.19□□□□□ -2.06
CCDC144A-201ENST00000328495 SPC25Q9HBM1 224 aa2.19□□□□□ -2.06
CCDC144A-201ENST00000328495 FGD5Q6ZNL6 1462 aa2.18□□□□□ -2.06
CCDC144A-201ENST00000328495 A0A087X1B8 175 aa2.18□□□□□ -2.06
CCDC144A-201ENST00000328495 K7ESF4 209 aa2.18□□□□□ -2.06
CCDC144A-201ENST00000328495 RNASET2O00584 256 aaKnown RBP2.18□□□□□ -2.06
CCDC144A-201ENST00000328495 ADCY6O43306 1168 aa2.18□□□□□ -2.06
CCDC144A-201ENST00000328495 ENDOD1O94919 500 aa2.18□□□□□ -2.06
CCDC144A-201ENST00000328495 NHLH2Q02577 135 aa2.18□□□□□ -2.06
CCDC144A-201ENST00000328495 PTPAQ15257 358 aa2.18□□□□□ -2.06
CCDC144A-201ENST00000328495 RHOUQ7L0Q8 258 aa2.18□□□□□ -2.06
CCDC144A-201ENST00000328495 ZNF572Q7Z3I7 529 aaPredicted RBP2.18□□□□□ -2.06
CCDC144A-201ENST00000328495 MRGPREQ86SM8 312 aa2.18□□□□□ -2.06
CCDC144A-201ENST00000328495 AMOTL1Q8IY63 956 aa2.18□□□□□ -2.06
CCDC144A-201ENST00000328495 COG1Q8WTW3 980 aa2.18□□□□□ -2.06
CCDC144A-201ENST00000328495 LANCL2Q9NS86 450 aa2.18□□□□□ -2.06
CCDC144A-201ENST00000328495 MOCS1Q9NZB8 636 aa2.18□□□□□ -2.06
CCDC144A-201ENST00000328495 SCOCQ9UIL1 159 aa2.18□□□□□ -2.06
CCDC144A-201ENST00000328495 NCOA3Q9Y6Q9 1424 aa2.18□□□□□ -2.06
CCDC144A-201ENST00000328495 RAD54L2Q9Y4B4 1467 aa2.18□□□□□ -2.06
CCDC144A-201ENST00000328495 FAM171A2A8MVW0 826 aa2.18□□□□□ -2.06
CCDC144A-201ENST00000328495 RAMP2O60895 175 aa2.18□□□□□ -2.06
CCDC144A-201ENST00000328495 IL2RBP14784 551 aa2.18□□□□□ -2.06
CCDC144A-201ENST00000328495 CLRN1P58418 232 aa2.18□□□□□ -2.06
CCDC144A-201ENST00000328495 MXRA7P84157 204 aa2.18□□□□□ -2.06
CCDC144A-201ENST00000328495 SP140Q13342 867 aa2.18□□□□□ -2.06
CCDC144A-201ENST00000328495 BMT2Q1RMZ1 405 aa2.18□□□□□ -2.06
CCDC144A-201ENST00000328495 RRP12Q5JTH9 1297 aaKnown RBP2.18□□□□□ -2.06
CCDC144A-201ENST00000328495 MFSD14BQ5SR56 506 aa2.18□□□□□ -2.06
CCDC144A-201ENST00000328495 ANKS6Q68DC2 871 aa2.18□□□□□ -2.06
CCDC144A-201ENST00000328495 NECAB2Q7Z6G3 386 aa2.18□□□□□ -2.06
CCDC144A-201ENST00000328495 LDLRAD3Q86YD5 345 aa2.18□□□□□ -2.06
CCDC144A-201ENST00000328495 ULK2Q8IYT8 1036 aa2.18□□□□□ -2.06
CCDC144A-201ENST00000328495 PQLC1Q8N2U9 271 aa2.18□□□□□ -2.06
CCDC144A-201ENST00000328495 RNF169Q8NCN4 708 aa2.18□□□□□ -2.06
CCDC144A-201ENST00000328495 SSH1Q8WYL5 1049 aa2.18□□□□□ -2.06
CCDC144A-201ENST00000328495 CEP95Q96GE4 821 aa2.18□□□□□ -2.06
CCDC144A-201ENST00000328495 CEP89Q96ST8 783 aa2.18□□□□□ -2.06
CCDC144A-201ENST00000328495 SENP6Q9GZR1 1112 aaPredicted RBP2.18□□□□□ -2.06
CCDC144A-201ENST00000328495 PUS7LQ9H0K6 701 aaKnown RBP2.18□□□□□ -2.06
CCDC144A-201ENST00000328495 GPR45Q9Y5Y3 372 aa2.18□□□□□ -2.06
CCDC144A-201ENST00000328495 NWD2Q9ULI1 1742 aa2.18□□□□□ -2.06
CCDC144A-201ENST00000328495 ADAMTS12P58397 1594 aa2.18□□□□□ -2.06
CCDC144A-201ENST00000328495 SETD5Q9C0A6 1442 aa2.18□□□□□ -2.06
CCDC144A-201ENST00000328495 MAP3K1Q13233 1512 aa2.18□□□□□ -2.06
CCDC144A-201ENST00000328495 AHRRA9YTQ3 701 aa2.18□□□□□ -2.06
CCDC144A-201ENST00000328495 TEX33O43247 280 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms