RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 TIMP1P01033 207 aa20.24■□□□□ 0.83
EXOSC3-201ENST00000327304 UCHL3P15374 230 aa20.24■□□□□ 0.83
EXOSC3-201ENST00000327304 GNG11P61952 73 aa20.24■□□□□ 0.83
EXOSC3-201ENST00000327304 ENPEPQ07075 957 aa20.24■□□□□ 0.83
EXOSC3-201ENST00000327304 DEFB128Q7Z7B8 93 aa20.24■□□□□ 0.83
EXOSC3-201ENST00000327304 SEPT8Q92599 483 aa20.24■□□□□ 0.83
EXOSC3-201ENST00000327304 VWCEQ96DN2 955 aa20.24■□□□□ 0.83
EXOSC3-201ENST00000327304 CGRRF1Q99675 332 aa20.24■□□□□ 0.83
EXOSC3-201ENST00000327304 TRAIPQ9BWF2 469 aa20.24■□□□□ 0.83
EXOSC3-201ENST00000327304 HAUS4Q9H6D7 363 aa20.24■□□□□ 0.83
EXOSC3-201ENST00000327304 GCNT4Q9P109 453 aa20.24■□□□□ 0.83
EXOSC3-201ENST00000327304 P4HA2O15460 535 aa20.23■□□□□ 0.83
EXOSC3-201ENST00000327304 N4BP1O75113 896 aaKnown RBP20.23■□□□□ 0.83
EXOSC3-201ENST00000327304 PARNO95453 639 aaKnown RBP20.23■□□□□ 0.83
EXOSC3-201ENST00000327304 SERPING1P05155 500 aa20.23■□□□□ 0.83
EXOSC3-201ENST00000327304 CLDN10P78369 228 aa20.23■□□□□ 0.83
EXOSC3-201ENST00000327304 USP37Q86T82 979 aa20.23■□□□□ 0.83
EXOSC3-201ENST00000327304 ZNF516Q92618 1163 aa20.23■□□□□ 0.83
EXOSC3-201ENST00000327304 L2HGDHQ9H9P8 463 aa20.23■□□□□ 0.83
EXOSC3-201ENST00000327304 CITO14578 2027 aa20.23■□□□□ 0.83
EXOSC3-201ENST00000327304 MEIS3P2A8K0S8 358 aa20.23■□□□□ 0.83
EXOSC3-201ENST00000327304 IL18RAPO95256 599 aa20.23■□□□□ 0.83
EXOSC3-201ENST00000327304 TNNI1P19237 187 aa20.23■□□□□ 0.83
EXOSC3-201ENST00000327304 IBSPP21815 317 aaPredicted RBP20.23■□□□□ 0.83
EXOSC3-201ENST00000327304 ARHGAP25P42331 645 aa20.23■□□□□ 0.83
EXOSC3-201ENST00000327304 POU5F1Q01860 360 aaKnown RBP20.23■□□□□ 0.83
EXOSC3-201ENST00000327304 HGSNATQ68CP4 663 aa20.23■□□□□ 0.83
EXOSC3-201ENST00000327304 EFCAB13Q8IY85 973 aa20.23■□□□□ 0.83
EXOSC3-201ENST00000327304 LPPQ93052 612 aa20.23■□□□□ 0.83
EXOSC3-201ENST00000327304 SNX27Q96L92 541 aa20.23■□□□□ 0.83
EXOSC3-201ENST00000327304 TMEM117Q9H0C3 514 aa20.23■□□□□ 0.83
EXOSC3-201ENST00000327304 SIX2Q9NPC8 291 aa20.23■□□□□ 0.83
EXOSC3-201ENST00000327304 RGS18Q9NS28 235 aa20.23■□□□□ 0.83
EXOSC3-201ENST00000327304 PARP2Q9UGN5 583 aa20.23■□□□□ 0.83
EXOSC3-201ENST00000327304 A0A0U1RQF3 1178 aa20.22■□□□□ 0.83
EXOSC3-201ENST00000327304 PMM2O15305 246 aa20.22■□□□□ 0.83
EXOSC3-201ENST00000327304 RAG1P15918 1043 aa20.22■□□□□ 0.83
EXOSC3-201ENST00000327304 ATF7P17544 494 aaPredicted RBP20.22■□□□□ 0.83
EXOSC3-201ENST00000327304 CASQ1P31415 396 aa20.22■□□□□ 0.83
EXOSC3-201ENST00000327304 MYL7Q01449 175 aa20.22■□□□□ 0.83
EXOSC3-201ENST00000327304 SPA17Q15506 151 aa20.22■□□□□ 0.83
EXOSC3-201ENST00000327304 MRPL10Q7Z7H8 261 aaKnown RBP20.22■□□□□ 0.83
EXOSC3-201ENST00000327304 OR5B17Q8NGF7 314 aa20.22■□□□□ 0.83
EXOSC3-201ENST00000327304 FTHL17Q9BXU8 183 aa20.22■□□□□ 0.83
EXOSC3-201ENST00000327304 TSPYL2Q9H2G4 693 aaPredicted RBP20.22■□□□□ 0.83
EXOSC3-201ENST00000327304 DEF6Q9H4E7 631 aa20.22■□□□□ 0.83
EXOSC3-201ENST00000327304 KLK14Q9P0G3 267 aa20.22■□□□□ 0.83
EXOSC3-201ENST00000327304 RALGAPA2Q2PPJ7 1873 aa20.21■□□□□ 0.83
EXOSC3-201ENST00000327304 CCDC85CA6NKD9 419 aa20.21■□□□□ 0.83
EXOSC3-201ENST00000327304 NFICP08651 508 aa20.21■□□□□ 0.83
EXOSC3-201ENST00000327304 ACTN1P12814 892 aa20.21■□□□□ 0.83
EXOSC3-201ENST00000327304 EIF4A3P38919 411 aaKnown RBP20.21■□□□□ 0.83
EXOSC3-201ENST00000327304 MXI1P50539 228 aa20.21■□□□□ 0.83
EXOSC3-201ENST00000327304 RAB27AP51159 221 aa20.21■□□□□ 0.83
EXOSC3-201ENST00000327304 YARSP54577 528 aaKnown RBP20.21■□□□□ 0.83
EXOSC3-201ENST00000327304 SURF1Q15526 300 aa20.21■□□□□ 0.83
EXOSC3-201ENST00000327304 ASTE1Q2TB18 679 aaPredicted RBP20.21■□□□□ 0.83
EXOSC3-201ENST00000327304 JADE1Q6IE81 842 aa20.21■□□□□ 0.83
EXOSC3-201ENST00000327304 WDR49Q8IV35 697 aa20.21■□□□□ 0.83
EXOSC3-201ENST00000327304 APBB2Q92870 758 aa20.21■□□□□ 0.83
EXOSC3-201ENST00000327304 TMEM8AQ9HCN3 771 aa20.21■□□□□ 0.83
EXOSC3-201ENST00000327304 RNF19AQ9NV58 838 aa20.21■□□□□ 0.83
EXOSC3-201ENST00000327304 A0A0U1RQJ8 604 aa20.2■□□□□ 0.82
EXOSC3-201ENST00000327304 C9IYK1 514 aa20.2■□□□□ 0.82
EXOSC3-201ENST00000327304 DYNC1I1O14576 645 aa20.2■□□□□ 0.82
EXOSC3-201ENST00000327304 ZNF623O75123 536 aa20.2■□□□□ 0.82
EXOSC3-201ENST00000327304 PLEKP08567 350 aaPredicted RBP20.2■□□□□ 0.82
EXOSC3-201ENST00000327304 ITGA4P13612 1032 aa20.2■□□□□ 0.82
EXOSC3-201ENST00000327304 GTF2H1P32780 548 aa20.2■□□□□ 0.82
EXOSC3-201ENST00000327304 RFC2P35250 354 aa20.2■□□□□ 0.82
EXOSC3-201ENST00000327304 KIF11P52732 1056 aa20.2■□□□□ 0.82
EXOSC3-201ENST00000327304 APBA1Q02410 837 aa20.2■□□□□ 0.82
EXOSC3-201ENST00000327304 CETN1Q12798 172 aa20.2■□□□□ 0.82
EXOSC3-201ENST00000327304 ALKAL1Q6UXT8 129 aa20.2■□□□□ 0.82
EXOSC3-201ENST00000327304 SV2AQ7L0J3 742 aa20.2■□□□□ 0.82
EXOSC3-201ENST00000327304 ECHDC2Q86YB7 292 aa20.2■□□□□ 0.82
EXOSC3-201ENST00000327304 C7orf61Q8IZ16 206 aa20.2■□□□□ 0.82
EXOSC3-201ENST00000327304 RNF169Q8NCN4 708 aa20.2■□□□□ 0.82
EXOSC3-201ENST00000327304 ATRIPQ8WXE1 791 aa20.2■□□□□ 0.82
EXOSC3-201ENST00000327304 SPAG5Q96R06 1193 aa20.2■□□□□ 0.82
EXOSC3-201ENST00000327304 WDR24Q96S15 920 aa20.2■□□□□ 0.82
EXOSC3-201ENST00000327304 ASB7Q9H672 318 aa20.2■□□□□ 0.82
EXOSC3-201ENST00000327304 FHOD1Q9Y613 1164 aa20.2■□□□□ 0.82
EXOSC3-201ENST00000327304 TRIP11Q15643 1979 aa20.2■□□□□ 0.82
EXOSC3-201ENST00000327304 KRT86O43790 486 aa20.2■□□□□ 0.82
EXOSC3-201ENST00000327304 AKR1B10O60218 316 aa20.2■□□□□ 0.82
EXOSC3-201ENST00000327304 CSF2RAP15509 400 aa20.2■□□□□ 0.82
EXOSC3-201ENST00000327304 RFX1P22670 979 aa20.2■□□□□ 0.82
EXOSC3-201ENST00000327304 TFAMQ00059 246 aaKnown RBP20.2■□□□□ 0.82
EXOSC3-201ENST00000327304 RAPGEF1Q13905 1077 aa20.2■□□□□ 0.82
EXOSC3-201ENST00000327304 ASIC2Q16515 512 aa20.2■□□□□ 0.82
EXOSC3-201ENST00000327304 TDRD10Q5VZ19 366 aaKnown RBP20.2■□□□□ 0.82
EXOSC3-201ENST00000327304 MFSD5Q6N075 450 aa20.2■□□□□ 0.82
EXOSC3-201ENST00000327304 AGMOQ6ZNB7 445 aa20.2■□□□□ 0.82
EXOSC3-201ENST00000327304 C15orf39Q6ZRI6 1047 aa20.2■□□□□ 0.82
EXOSC3-201ENST00000327304 KIAA1328Q86T90 577 aa20.2■□□□□ 0.82
EXOSC3-201ENST00000327304 TMEM130Q8N3G9 435 aa20.2■□□□□ 0.82
EXOSC3-201ENST00000327304 ZMAT2Q96NC0 199 aaKnown RBP20.2■□□□□ 0.82
EXOSC3-201ENST00000327304 MTMR12Q9C0I1 747 aa20.2■□□□□ 0.82
EXOSC3-201ENST00000327304 PLEKHA5Q9HAU0 1116 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms