RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 PLAGL2Q9UPG8 496 aa13.75□□□□□ -0.21
DDX39A-202ENST00000324340 PIN4Q9Y237 131 aaKnown RBP13.75□□□□□ -0.21
DDX39A-202ENST00000324340 MROH7Q68CQ1 1323 aa13.75□□□□□ -0.21
DDX39A-202ENST00000324340 CCDC151A5D8V7 595 aa13.74□□□□□ -0.21
DDX39A-202ENST00000324340 GPR182O15218 404 aa13.74□□□□□ -0.21
DDX39A-202ENST00000324340 NPTXRO95502 500 aa13.74□□□□□ -0.21
DDX39A-202ENST00000324340 CTSHP09668 335 aa13.74□□□□□ -0.21
DDX39A-202ENST00000324340 CXCL8P10145 99 aa13.74□□□□□ -0.21
DDX39A-202ENST00000324340 COL6A1P12109 1028 aa13.74□□□□□ -0.21
DDX39A-202ENST00000324340 GJA8P48165 433 aa13.74□□□□□ -0.21
DDX39A-202ENST00000324340 JAM2P57087 298 aa13.74□□□□□ -0.21
DDX39A-202ENST00000324340 POLR2FP61218 127 aaKnown RBP13.74□□□□□ -0.21
DDX39A-202ENST00000324340 OSTNP61366 133 aa13.74□□□□□ -0.21
DDX39A-202ENST00000324340 CDK17Q00537 523 aa13.74□□□□□ -0.21
DDX39A-202ENST00000324340 TTC31Q49AM3 519 aaPredicted RBP13.74□□□□□ -0.21
DDX39A-202ENST00000324340 ZNF618Q5T7W0 954 aa13.74□□□□□ -0.21
DDX39A-202ENST00000324340 TDRD10Q5VZ19 366 aaKnown RBP13.74□□□□□ -0.21
DDX39A-202ENST00000324340 PHLDB3Q6NSJ2 640 aa13.74□□□□□ -0.21
DDX39A-202ENST00000324340 PDXDC1Q6P996 788 aa13.74□□□□□ -0.21
DDX39A-202ENST00000324340 WDR59Q6PJI9 974 aa13.74□□□□□ -0.21
DDX39A-202ENST00000324340 CACNA2D4Q7Z3S7 1137 aa13.74□□□□□ -0.21
DDX39A-202ENST00000324340 NT5DC4Q86YG4 428 aa13.74□□□□□ -0.21
DDX39A-202ENST00000324340 ANKLE1Q8NAG6 615 aa13.74□□□□□ -0.21
DDX39A-202ENST00000324340 TAS1R2Q8TE23 839 aa13.74□□□□□ -0.21
DDX39A-202ENST00000324340 SEMA4DQ92854 862 aa13.74□□□□□ -0.21
DDX39A-202ENST00000324340 ACAP3Q96P50 834 aa13.74□□□□□ -0.21
DDX39A-202ENST00000324340 TACO1Q9BSH4 297 aaKnown RBP13.74□□□□□ -0.21
DDX39A-202ENST00000324340 EIF2AQ9BY44 585 aaKnown RBP13.74□□□□□ -0.21
DDX39A-202ENST00000324340 AGO3Q9H9G7 860 aaKnown RBP13.74□□□□□ -0.21
DDX39A-202ENST00000324340 PLEKHA5Q9HAU0 1116 aa13.74□□□□□ -0.21
DDX39A-202ENST00000324340 RAB20Q9NX57 234 aa13.74□□□□□ -0.21
DDX39A-202ENST00000324340 LRRC53A6NM62 1247 aa13.73□□□□□ -0.21
DDX39A-202ENST00000324340 LACTBL1A8MY62 500 aa13.73□□□□□ -0.21
DDX39A-202ENST00000324340 MAP2K7O14733 419 aa13.73□□□□□ -0.21
DDX39A-202ENST00000324340 ARHGAP6O43182 974 aa13.73□□□□□ -0.21
DDX39A-202ENST00000324340 LPIN1Q14693 890 aa13.73□□□□□ -0.21
DDX39A-202ENST00000324340 IQCEQ6IPM2 695 aa13.73□□□□□ -0.21
DDX39A-202ENST00000324340 RRAGAQ7L523 313 aa13.73□□□□□ -0.21
DDX39A-202ENST00000324340 ANKRD33Q7Z3H0 272 aa13.73□□□□□ -0.21
DDX39A-202ENST00000324340 TMTC1Q8IUR5 882 aa13.73□□□□□ -0.21
DDX39A-202ENST00000324340 EFCAB13Q8IY85 973 aa13.73□□□□□ -0.21
DDX39A-202ENST00000324340 OR5B17Q8NGF7 314 aa13.73□□□□□ -0.21
DDX39A-202ENST00000324340 TRAIPQ9BWF2 469 aa13.73□□□□□ -0.21
DDX39A-202ENST00000324340 NLRC4Q9NPP4 1024 aa13.73□□□□□ -0.21
DDX39A-202ENST00000324340 AIPL1Q9NZN9 384 aa13.73□□□□□ -0.21
DDX39A-202ENST00000324340 AJAP1Q9UKB5 411 aaPredicted RBP13.73□□□□□ -0.21
DDX39A-202ENST00000324340 C2CD2Q9Y426 696 aa13.73□□□□□ -0.21
DDX39A-202ENST00000324340 LRRN2O75325 713 aa13.72□□□□□ -0.21
DDX39A-202ENST00000324340 VNN1O95497 513 aa13.72□□□□□ -0.21
DDX39A-202ENST00000324340 TFRCP02786 760 aaKnown RBP13.72□□□□□ -0.21
DDX39A-202ENST00000324340 DSC3Q14574 896 aa13.72□□□□□ -0.21
DDX39A-202ENST00000324340 DUOXA2Q1HG44 320 aa13.72□□□□□ -0.21
DDX39A-202ENST00000324340 TSR1Q2NL82 804 aaKnown RBP13.72□□□□□ -0.21
DDX39A-202ENST00000324340 XKR4Q5GH76 650 aa13.72□□□□□ -0.21
DDX39A-202ENST00000324340 LMBRD2Q68DH5 695 aaPredicted RBP13.72□□□□□ -0.21
DDX39A-202ENST00000324340 ALKAL1Q6UXT8 129 aa13.72□□□□□ -0.21
DDX39A-202ENST00000324340 CYP26C1Q6V0L0 522 aa13.72□□□□□ -0.21
DDX39A-202ENST00000324340 SLC39A5Q6ZMH5 540 aa13.72□□□□□ -0.21
DDX39A-202ENST00000324340 FAM43BQ6ZT52 329 aaPredicted RBP13.72□□□□□ -0.21
DDX39A-202ENST00000324340 REXO1L1PQ8IX06 675 aa13.72□□□□□ -0.21
DDX39A-202ENST00000324340 TOX2Q96NM4 488 aa13.72□□□□□ -0.21
DDX39A-202ENST00000324340 TSPAN18Q96SJ8 248 aa13.72□□□□□ -0.21
DDX39A-202ENST00000324340 STK33Q9BYT3 514 aa13.72□□□□□ -0.21
DDX39A-202ENST00000324340 OSBPL7Q9BZF2 842 aa13.72□□□□□ -0.21
DDX39A-202ENST00000324340 TRIM6Q9C030 488 aaPredicted RBP13.72□□□□□ -0.21
DDX39A-202ENST00000324340 DEF6Q9H4E7 631 aa13.72□□□□□ -0.21
DDX39A-202ENST00000324340 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.72□□□□□ -0.21
DDX39A-202ENST00000324340 DNAJC12Q9UKB3 198 aa13.72□□□□□ -0.21
DDX39A-202ENST00000324340 PADI3Q9ULW8 664 aa13.72□□□□□ -0.21
DDX39A-202ENST00000324340 DERAQ9Y315 318 aa13.72□□□□□ -0.21
DDX39A-202ENST00000324340 JRKLQ9Y4A0 524 aa13.72□□□□□ -0.21
DDX39A-202ENST00000324340 PDCD11Q14690 1871 aaKnown RBP13.72□□□□□ -0.21
DDX39A-202ENST00000324340 CITO14578 2027 aa13.72□□□□□ -0.21
DDX39A-202ENST00000324340 PITPNM1O00562 1244 aa13.71□□□□□ -0.21
DDX39A-202ENST00000324340 HLA-DRAP01903 254 aa13.71□□□□□ -0.21
DDX39A-202ENST00000324340 NFICP08651 508 aa13.71□□□□□ -0.21
DDX39A-202ENST00000324340 GHRP10912 638 aa13.71□□□□□ -0.21
DDX39A-202ENST00000324340 PAK2Q13177 524 aa13.71□□□□□ -0.21
DDX39A-202ENST00000324340 BFSP2Q13515 415 aa13.71□□□□□ -0.21
DDX39A-202ENST00000324340 SFMBT2Q5VUG0 894 aa13.71□□□□□ -0.21
DDX39A-202ENST00000324340 SMYD5Q6GMV2 418 aa13.71□□□□□ -0.21
DDX39A-202ENST00000324340 GJB7Q6PEY0 223 aa13.71□□□□□ -0.21
DDX39A-202ENST00000324340 RSRC2Q7L4I2 434 aaKnown RBP13.71□□□□□ -0.21
DDX39A-202ENST00000324340 TRAPPC11Q7Z392 1133 aa13.71□□□□□ -0.21
DDX39A-202ENST00000324340 CCDC91Q7Z6B0 441 aa13.71□□□□□ -0.21
DDX39A-202ENST00000324340 SMG8Q8ND04 991 aaKnown RBP13.71□□□□□ -0.21
DDX39A-202ENST00000324340 HELQQ8TDG4 1101 aa13.71□□□□□ -0.21
DDX39A-202ENST00000324340 FAM212AQ96EL1 285 aa13.71□□□□□ -0.21
DDX39A-202ENST00000324340 FAM84AQ96KN4 292 aa13.71□□□□□ -0.21
DDX39A-202ENST00000324340 SNX27Q96L92 541 aa13.71□□□□□ -0.21
DDX39A-202ENST00000324340 FAM81BQ96LP2 452 aa13.71□□□□□ -0.21
DDX39A-202ENST00000324340 MTMR12Q9C0I1 747 aa13.71□□□□□ -0.21
DDX39A-202ENST00000324340 GPR88Q9GZN0 384 aa13.71□□□□□ -0.21
DDX39A-202ENST00000324340 NXF3Q9H4D5 531 aaKnown RBP13.71□□□□□ -0.21
DDX39A-202ENST00000324340 ZNHIT6Q9NWK9 470 aaKnown RBP13.71□□□□□ -0.21
DDX39A-202ENST00000324340 SNTG2Q9NY99 539 aa13.71□□□□□ -0.21
DDX39A-202ENST00000324340 CNTN3Q9P232 1028 aa13.71□□□□□ -0.21
DDX39A-202ENST00000324340 ADAM21Q9UKJ8 722 aa13.71□□□□□ -0.21
DDX39A-202ENST00000324340 IPPQ9Y573 584 aa13.71□□□□□ -0.21
DDX39A-202ENST00000324340 F8VZ95 297 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms