RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 TAAR1Q96RJ0 339 aa9.28□□□□□ -0.92
CLK1-201ENST00000321356 PLCD4Q9BRC7 762 aa9.28□□□□□ -0.92
CLK1-201ENST00000321356 TMEM39BQ9GZU3 492 aa9.28□□□□□ -0.92
CLK1-201ENST00000321356 SLC38A10Q9HBR0 1119 aa9.28□□□□□ -0.92
CLK1-201ENST00000321356 NOD2Q9HC29 1040 aa9.28□□□□□ -0.92
CLK1-201ENST00000321356 KMT5AQ9NQR1 393 aa9.28□□□□□ -0.92
CLK1-201ENST00000321356 FGFR1OP2Q9NVK5 253 aa9.28□□□□□ -0.92
CLK1-201ENST00000321356 CTNNAL1Q9UBT7 734 aa9.28□□□□□ -0.92
CLK1-201ENST00000321356 PRKAG3Q9UGI9 489 aa9.28□□□□□ -0.92
CLK1-201ENST00000321356 ANAPC5Q9UJX4 755 aa9.28□□□□□ -0.92
CLK1-201ENST00000321356 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.28□□□□□ -0.92
CLK1-201ENST00000321356 PCDHB2Q9Y5E7 798 aa9.28□□□□□ -0.92
CLK1-201ENST00000321356 WDR46O15213 610 aaKnown RBP9.27□□□□□ -0.93
CLK1-201ENST00000321356 PSTPIP1O43586 416 aa9.27□□□□□ -0.93
CLK1-201ENST00000321356 CDH16O75309 829 aa9.27□□□□□ -0.93
CLK1-201ENST00000321356 SUN1O94901 812 aa9.27□□□□□ -0.93
CLK1-201ENST00000321356 UBOX5O94941 541 aa9.27□□□□□ -0.93
CLK1-201ENST00000321356 STBD1O95210 358 aa9.27□□□□□ -0.93
CLK1-201ENST00000321356 CALCAP01258 141 aa9.27□□□□□ -0.93
CLK1-201ENST00000321356 EIF2AK2P19525 551 aaKnown RBP9.27□□□□□ -0.93
CLK1-201ENST00000321356 CHRNA5P30532 468 aa9.27□□□□□ -0.93
CLK1-201ENST00000321356 RTP1P59025 263 aa9.27□□□□□ -0.93
CLK1-201ENST00000321356 BPIFB4P59827 614 aa9.27□□□□□ -0.93
CLK1-201ENST00000321356 RPS6P62753 249 aaKnown RBP9.27□□□□□ -0.93
CLK1-201ENST00000321356 BNIP1Q12981 228 aa9.27□□□□□ -0.93
CLK1-201ENST00000321356 MKRN3Q13064 507 aaKnown RBP9.27□□□□□ -0.93
CLK1-201ENST00000321356 ZNF268Q14587 947 aaPredicted RBP9.27□□□□□ -0.93
CLK1-201ENST00000321356 LLGL1Q15334 1064 aa9.27□□□□□ -0.93
CLK1-201ENST00000321356 BRDTQ58F21 947 aaPredicted RBP9.27□□□□□ -0.93
CLK1-201ENST00000321356 TMEM63BQ5T3F8 832 aa9.27□□□□□ -0.93
CLK1-201ENST00000321356 GPD1LQ8N335 351 aa9.27□□□□□ -0.93
CLK1-201ENST00000321356 DYDC1Q8WWB3 177 aa9.27□□□□□ -0.93
CLK1-201ENST00000321356 POMGNT1Q8WZA1 660 aa9.27□□□□□ -0.93
CLK1-201ENST00000321356 ELMO3Q96BJ8 720 aa9.27□□□□□ -0.93
CLK1-201ENST00000321356 SCLT1Q96NL6 688 aa9.27□□□□□ -0.93
CLK1-201ENST00000321356 SENP7Q9BQF6 1050 aa9.27□□□□□ -0.93
CLK1-201ENST00000321356 PDCD2LQ9BRP1 358 aa9.27□□□□□ -0.93
CLK1-201ENST00000321356 ATP6V0A4Q9HBG4 840 aa9.27□□□□□ -0.93
CLK1-201ENST00000321356 PDLIM7Q9NR12 457 aa9.27□□□□□ -0.93
CLK1-201ENST00000321356 CD2APQ9Y5K6 639 aa9.27□□□□□ -0.93
CLK1-201ENST00000321356 ACTL7BQ9Y614 415 aa9.27□□□□□ -0.93
CLK1-201ENST00000321356 PARP14Q460N5 1801 aa9.26□□□□□ -0.93
CLK1-201ENST00000321356 THAP12O43422 761 aa9.26□□□□□ -0.93
CLK1-201ENST00000321356 GH1P01241 217 aa9.26□□□□□ -0.93
CLK1-201ENST00000321356 ABHD2P08910 425 aa9.26□□□□□ -0.93
CLK1-201ENST00000321356 POTEJP0CG39 1038 aa9.26□□□□□ -0.93
CLK1-201ENST00000321356 FDX1P10109 184 aa9.26□□□□□ -0.93
CLK1-201ENST00000321356 RALAP11233 206 aa9.26□□□□□ -0.93
CLK1-201ENST00000321356 CETPP11597 493 aa9.26□□□□□ -0.93
CLK1-201ENST00000321356 ALADP13716 330 aa9.26□□□□□ -0.93
CLK1-201ENST00000321356 BRAFP15056 766 aa9.26□□□□□ -0.93
CLK1-201ENST00000321356 ACO1P21399 889 aaKnown RBP9.26□□□□□ -0.93
CLK1-201ENST00000321356 KLRC2P26717 231 aa9.26□□□□□ -0.93
CLK1-201ENST00000321356 ADCY8P40145 1251 aa9.26□□□□□ -0.93
CLK1-201ENST00000321356 STAT4Q14765 748 aa9.26□□□□□ -0.93
CLK1-201ENST00000321356 TRIP13Q15645 432 aaPredicted RBP9.26□□□□□ -0.93
CLK1-201ENST00000321356 FAM133BQ5BKY9 247 aaKnown RBP9.26□□□□□ -0.93
CLK1-201ENST00000321356 CGB2Q6NT52 195 aa9.26□□□□□ -0.93
CLK1-201ENST00000321356 TAS1R3Q7RTX0 852 aa9.26□□□□□ -0.93
CLK1-201ENST00000321356 SPATA21Q7Z572 469 aa9.26□□□□□ -0.93
CLK1-201ENST00000321356 KATNAL2Q8IYT4 538 aa9.26□□□□□ -0.93
CLK1-201ENST00000321356 CYP4X1Q8N118 509 aa9.26□□□□□ -0.93
CLK1-201ENST00000321356 LARGE2Q8N3Y3 721 aa9.26□□□□□ -0.93
CLK1-201ENST00000321356 OGFOD1Q8N543 542 aa9.26□□□□□ -0.93
CLK1-201ENST00000321356 CCDC89Q8N998 374 aa9.26□□□□□ -0.93
CLK1-201ENST00000321356 MTMR14Q8NCE2 650 aa9.26□□□□□ -0.93
CLK1-201ENST00000321356 BBOF1Q8ND07 529 aa9.26□□□□□ -0.93
CLK1-201ENST00000321356 ZNF516Q92618 1163 aa9.26□□□□□ -0.93
CLK1-201ENST00000321356 LPAR1Q92633 364 aa9.26□□□□□ -0.93
CLK1-201ENST00000321356 MAGEB18Q96M61 343 aa9.26□□□□□ -0.93
CLK1-201ENST00000321356 PI4K2AQ9BTU6 479 aa9.26□□□□□ -0.93
CLK1-201ENST00000321356 MOV10L1Q9BXT6 1211 aaKnown RBP9.26□□□□□ -0.93
CLK1-201ENST00000321356 ZNF341Q9BYN7 854 aa9.26□□□□□ -0.93
CLK1-201ENST00000321356 FOXP3Q9BZS1 431 aa9.26□□□□□ -0.93
CLK1-201ENST00000321356 CXorf56Q9H5V9 222 aa9.26□□□□□ -0.93
CLK1-201ENST00000321356 QTRT2Q9H974 415 aaKnown RBP9.26□□□□□ -0.93
CLK1-201ENST00000321356 PXMP2Q9NR77 195 aa9.26□□□□□ -0.93
CLK1-201ENST00000321356 C1orf112Q9NSG2 853 aa9.26□□□□□ -0.93
CLK1-201ENST00000321356 ARL2BPQ9Y2Y0 163 aa9.26□□□□□ -0.93
CLK1-201ENST00000321356 COL4A5P29400 1685 aa9.26□□□□□ -0.93
CLK1-201ENST00000321356 SIP14410 1827 aa9.26□□□□□ -0.93
CLK1-201ENST00000321356 NFASCO94856 1347 aa9.26□□□□□ -0.93
CLK1-201ENST00000321356 KIAA1217Q5T5P2 1943 aa9.26□□□□□ -0.93
CLK1-201ENST00000321356 FOXO6A8MYZ6 492 aa9.25□□□□□ -0.93
CLK1-201ENST00000321356 HNRNPDLO14979 420 aaKnown RBP9.25□□□□□ -0.93
CLK1-201ENST00000321356 ZNF862O60290 1169 aa9.25□□□□□ -0.93
CLK1-201ENST00000321356 EZRP15311 586 aaKnown RBP9.25□□□□□ -0.93
CLK1-201ENST00000321356 NQO1P15559 274 aaKnown RBP9.25□□□□□ -0.93
CLK1-201ENST00000321356 NSFP46459 744 aaKnown RBP9.25□□□□□ -0.93
CLK1-201ENST00000321356 NOMO3P69849 1222 aa9.25□□□□□ -0.93
CLK1-201ENST00000321356 SF3A3Q12874 501 aaKnown RBP eCLIP9.25□□□□□ -0.937e-7■■■□□ 14.6
CLK1-201ENST00000321356 PSMD6Q15008 389 aa9.25□□□□□ -0.93
CLK1-201ENST00000321356 ZACNQ401N2 412 aa9.25□□□□□ -0.93
CLK1-201ENST00000321356 NUGGCQ68CJ6 796 aa9.25□□□□□ -0.93
CLK1-201ENST00000321356 PLEKHA7Q6IQ23 1121 aa9.25□□□□□ -0.93
CLK1-201ENST00000321356 LLGL2Q6P1M3 1020 aa9.25□□□□□ -0.93
CLK1-201ENST00000321356 XRRA1Q6P2D8 792 aa9.25□□□□□ -0.93
CLK1-201ENST00000321356 TLDC1Q6P9B6 456 aa9.25□□□□□ -0.93
CLK1-201ENST00000321356 TRIM72Q6ZMU5 477 aa9.25□□□□□ -0.93
CLK1-201ENST00000321356 TBC1D1Q86TI0 1168 aaPredicted RBP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms