RNA–Protein interactions for RNA: ENST00000320936.9

CIRBP-201, Transcript of cold inducible RNA binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIRBP, Length 1,328 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-201ENST00000320936 KNOP1Q1ED39 458 aaKnown RBP20.3■□□□□ 0.84
CIRBP-201ENST00000320936 BMT2Q1RMZ1 405 aa20.3■□□□□ 0.84
CIRBP-201ENST00000320936 CRELD2Q6UXH1 353 aaPredicted RBP20.3■□□□□ 0.84
CIRBP-201ENST00000320936 ATXN2LQ8WWM7 1075 aaKnown RBP20.3■□□□□ 0.84
CIRBP-201ENST00000320936 RIN2Q8WYP3 895 aaPredicted RBP20.3■□□□□ 0.84
CIRBP-201ENST00000320936 RMND1Q9NWS8 449 aa20.3■□□□□ 0.84
CIRBP-201ENST00000320936 HSPBP1Q9NZL4 362 aa20.3■□□□□ 0.84
CIRBP-201ENST00000320936 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.3■□□□□ 0.84
CIRBP-201ENST00000320936 TMEM189-UBE2V1I3L0A0 370 aa20.29■□□□□ 0.84
CIRBP-201ENST00000320936 I3L4J1 428 aa20.29■□□□□ 0.84
CIRBP-201ENST00000320936 PRPF40AO75400 957 aaKnown RBP20.29■□□□□ 0.84
CIRBP-201ENST00000320936 RHOBTB3O94955 611 aa20.29■□□□□ 0.84
CIRBP-201ENST00000320936 KIF20AO95235 890 aa20.29■□□□□ 0.84
CIRBP-201ENST00000320936 MCM4P33991 863 aa20.29■□□□□ 0.84
CIRBP-201ENST00000320936 UBE2HP62256 183 aa20.29■□□□□ 0.84
CIRBP-201ENST00000320936 RBM10P98175 930 aaKnown RBP20.29■□□□□ 0.84
CIRBP-201ENST00000320936 BRSK2Q8IWQ3 736 aa20.29■□□□□ 0.84
CIRBP-201ENST00000320936 C3orf58Q8NDZ4 430 aa20.29■□□□□ 0.84
CIRBP-201ENST00000320936 GOLGA5Q8TBA6 731 aa20.29■□□□□ 0.84
CIRBP-201ENST00000320936 SMARCE1Q969G3 411 aa20.29■□□□□ 0.84
CIRBP-201ENST00000320936 TIGD1Q96MW7 591 aa20.29■□□□□ 0.84
CIRBP-201ENST00000320936 TSPAN18Q96SJ8 248 aa20.29■□□□□ 0.84
CIRBP-201ENST00000320936 TTPALQ9BTX7 342 aa20.29■□□□□ 0.84
CIRBP-201ENST00000320936 ASB7Q9H672 318 aa20.29■□□□□ 0.84
CIRBP-201ENST00000320936 BARX2Q9UMQ3 279 aaPredicted RBP20.29■□□□□ 0.84
CIRBP-201ENST00000320936 DERAQ9Y315 318 aa20.29■□□□□ 0.84
CIRBP-201ENST00000320936 VWA8A3KMH1 1905 aa20.29■□□□□ 0.84
CIRBP-201ENST00000320936 SPDYE4A6NLX3 237 aa20.28■□□□□ 0.84
CIRBP-201ENST00000320936 TGFB1I1O43294 461 aa20.28■□□□□ 0.84
CIRBP-201ENST00000320936 CLASP2O75122 1294 aaKnown RBP20.28■□□□□ 0.84
CIRBP-201ENST00000320936 TBX10O75333 385 aa20.28■□□□□ 0.84
CIRBP-201ENST00000320936 KLRC2P26717 231 aa20.28■□□□□ 0.84
CIRBP-201ENST00000320936 BRCC3P46736 316 aa20.28■□□□□ 0.84
CIRBP-201ENST00000320936 SNRPFP62306 86 aaKnown RBP20.28■□□□□ 0.84
CIRBP-201ENST00000320936 DSG1Q02413 1049 aa20.28■□□□□ 0.84
CIRBP-201ENST00000320936 ADAM15Q13444 863 aa20.28■□□□□ 0.84
CIRBP-201ENST00000320936 KCNB1Q14721 858 aa20.28■□□□□ 0.84
CIRBP-201ENST00000320936 RNF168Q8IYW5 571 aaPredicted RBP20.28■□□□□ 0.84
CIRBP-201ENST00000320936 TMEM130Q8N3G9 435 aa20.28■□□□□ 0.84
CIRBP-201ENST00000320936 ERCC4Q92889 916 aaPredicted RBP20.28■□□□□ 0.84
CIRBP-201ENST00000320936 CGNQ9P2M7 1197 aaKnown RBP20.28■□□□□ 0.84
CIRBP-201ENST00000320936 MAPK8IP1Q9UQF2 711 aa20.28■□□□□ 0.84
CIRBP-201ENST00000320936 IRAK3Q9Y616 596 aa20.28■□□□□ 0.84
CIRBP-201ENST00000320936 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.27■□□□□ 0.84
CIRBP-201ENST00000320936 ZNF233A6NK53 670 aa20.27■□□□□ 0.84
CIRBP-201ENST00000320936 ADRB2P07550 413 aa20.27■□□□□ 0.84
CIRBP-201ENST00000320936 CNPP09543 421 aaKnown RBP20.27■□□□□ 0.84
CIRBP-201ENST00000320936 CYP3A5P20815 502 aa20.27■□□□□ 0.84
CIRBP-201ENST00000320936 IGFBP6P24592 240 aaPredicted RBP20.27■□□□□ 0.84
CIRBP-201ENST00000320936 KCNQ1P51787 676 aa20.27■□□□□ 0.84
CIRBP-201ENST00000320936 TFAMQ00059 246 aaKnown RBP20.27■□□□□ 0.84
CIRBP-201ENST00000320936 POU5F1Q01860 360 aaKnown RBP20.27■□□□□ 0.84
CIRBP-201ENST00000320936 CREMQ03060 361 aa20.27■□□□□ 0.84
CIRBP-201ENST00000320936 COL19A1Q14993 1142 aa20.27■□□□□ 0.84
CIRBP-201ENST00000320936 CTC1Q2NKJ3 1217 aa20.27■□□□□ 0.84
CIRBP-201ENST00000320936 RTP2Q5QGT7 225 aa20.27■□□□□ 0.84
CIRBP-201ENST00000320936 PRSS55Q6UWB4 352 aaPredicted RBP20.27■□□□□ 0.84
CIRBP-201ENST00000320936 CBWD2Q8IUF1 395 aa20.27■□□□□ 0.84
CIRBP-201ENST00000320936 GLYCTKQ8IVS8 523 aa20.27■□□□□ 0.84
CIRBP-201ENST00000320936 ASB2Q96Q27 587 aa20.27■□□□□ 0.84
CIRBP-201ENST00000320936 KIAA1586Q9HCI6 787 aa20.27■□□□□ 0.84
CIRBP-201ENST00000320936 C2CD2Q9Y426 696 aa20.27■□□□□ 0.84
CIRBP-201ENST00000320936 PLXNA3P51805 1871 aa20.27■□□□□ 0.84
CIRBP-201ENST00000320936 GLP2RO95838 553 aa20.27■□□□□ 0.83
CIRBP-201ENST00000320936 EFEMP2O95967 443 aa20.27■□□□□ 0.83
CIRBP-201ENST00000320936 ADH1AP07327 375 aa20.27■□□□□ 0.83
CIRBP-201ENST00000320936 DLX2Q07687 328 aaPredicted RBP20.27■□□□□ 0.83
CIRBP-201ENST00000320936 ZBTB6Q15916 424 aa20.27■□□□□ 0.83
CIRBP-201ENST00000320936 PSMD5Q16401 504 aa20.27■□□□□ 0.83
CIRBP-201ENST00000320936 SNRNP35Q16560 246 aaKnown RBP20.27■□□□□ 0.83
CIRBP-201ENST00000320936 KIAA0319Q5VV43 1072 aa20.27■□□□□ 0.83
CIRBP-201ENST00000320936 SPATA1Q5VX52 437 aa20.27■□□□□ 0.83
CIRBP-201ENST00000320936 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.27■□□□□ 0.83
CIRBP-201ENST00000320936 PPFIBP1Q86W92 1011 aa20.27■□□□□ 0.83
CIRBP-201ENST00000320936 EFCAB13Q8IY85 973 aa20.27■□□□□ 0.83
CIRBP-201ENST00000320936 XXYLT1Q8NBI6 393 aa20.27■□□□□ 0.83
CIRBP-201ENST00000320936 RDH13Q8NBN7 331 aa20.27■□□□□ 0.83
CIRBP-201ENST00000320936 VN1R2Q8NFZ6 395 aa20.27■□□□□ 0.83
CIRBP-201ENST00000320936 CASP10Q92851 521 aa20.27■□□□□ 0.83
CIRBP-201ENST00000320936 GBP4Q96PP9 640 aa20.27■□□□□ 0.83
CIRBP-201ENST00000320936 KLHL5Q96PQ7 755 aa20.27■□□□□ 0.83
CIRBP-201ENST00000320936 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.27■□□□□ 0.833e-7■■□□□ 13.8
CIRBP-201ENST00000320936 CHST7Q9NS84 486 aa20.27■□□□□ 0.83
CIRBP-201ENST00000320936 DPP3Q9NY33 737 aa20.27■□□□□ 0.83
CIRBP-201ENST00000320936 HCFC2Q9Y5Z7 792 aa20.27■□□□□ 0.83
CIRBP-201ENST00000320936 SPTBN5Q9NRC6 3674 aaKnown RBP20.26■□□□□ 0.83
CIRBP-201ENST00000320936 A0A0C4DFX4 3053 aa20.26■□□□□ 0.83
CIRBP-201ENST00000320936 EXOC3O60645 756 aa20.26■□□□□ 0.83
CIRBP-201ENST00000320936 RPL17P18621 184 aaKnown RBP20.26■□□□□ 0.83
CIRBP-201ENST00000320936 TKTP29401 623 aaKnown RBP20.26■□□□□ 0.83
CIRBP-201ENST00000320936 LRPAP1P30533 357 aa20.26■□□□□ 0.83
CIRBP-201ENST00000320936 LTBRP36941 435 aa20.26■□□□□ 0.83
CIRBP-201ENST00000320936 LEXMQ3ZCV2 418 aa20.26■□□□□ 0.83
CIRBP-201ENST00000320936 TJAP1Q5JTD0 557 aa20.26■□□□□ 0.83
CIRBP-201ENST00000320936 PDXDC1Q6P996 788 aa20.26■□□□□ 0.83
CIRBP-201ENST00000320936 SMYD4Q8IYR2 804 aaPredicted RBP20.26■□□□□ 0.83
CIRBP-201ENST00000320936 PDE11AQ9HCR9 933 aa20.26■□□□□ 0.83
CIRBP-201ENST00000320936 CD207Q9UJ71 328 aa20.26■□□□□ 0.83
CIRBP-201ENST00000320936 TCF20Q9UGU0 1960 aaKnown RBP20.25■□□□□ 0.83
CIRBP-201ENST00000320936 TEX28O15482 410 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms