RNA–Protein interactions for RNA: ENST00000319172.9

TMEM39A-201, Transcript of transmembrane protein 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM39A, Length 4,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-201ENST00000319172 ANKRD36CQ5JPF3 1778 aa9.89□□□□□ -0.83
TMEM39A-201ENST00000319172 GRAP2O75791 330 aa9.89□□□□□ -0.83
TMEM39A-201ENST00000319172 FARP2O94887 1054 aaPredicted RBP9.89□□□□□ -0.83
TMEM39A-201ENST00000319172 CYP11B1P15538 503 aa9.89□□□□□ -0.83
TMEM39A-201ENST00000319172 YBX3P16989 372 aaKnown RBP eCLIP9.89□□□□□ -0.83
TMEM39A-201ENST00000319172 PSMC4P43686 418 aa9.89□□□□□ -0.83
TMEM39A-201ENST00000319172 GTF2BQ00403 316 aa9.89□□□□□ -0.83
TMEM39A-201ENST00000319172 KIAA1841Q6NSI8 718 aa9.89□□□□□ -0.83
TMEM39A-201ENST00000319172 CEP57Q86XR8 500 aa9.89□□□□□ -0.83
TMEM39A-201ENST00000319172 C1orf54Q8WWF1 131 aa9.89□□□□□ -0.83
TMEM39A-201ENST00000319172 DNAJB3Q8WWF6 145 aa9.89□□□□□ -0.83
TMEM39A-201ENST00000319172 C12orf42Q96LP6 360 aa9.89□□□□□ -0.83
TMEM39A-201ENST00000319172 MBOAT7Q96N66 472 aa9.89□□□□□ -0.83
TMEM39A-201ENST00000319172 FAM114A2Q9NRY5 505 aa9.89□□□□□ -0.83
TMEM39A-201ENST00000319172 C17orf102A2RUQ5 167 aa9.89□□□□□ -0.83
TMEM39A-201ENST00000319172 GTPBP10A4D1E9 387 aaKnown RBP9.89□□□□□ -0.83
TMEM39A-201ENST00000319172 SOWAHBA6NEL2 793 aa9.89□□□□□ -0.83
TMEM39A-201ENST00000319172 RGS16O15492 202 aaPredicted RBP9.89□□□□□ -0.83
TMEM39A-201ENST00000319172 TMEM253P0C7T8 217 aa9.89□□□□□ -0.83
TMEM39A-201ENST00000319172 COMTP21964 271 aa9.89□□□□□ -0.83
TMEM39A-201ENST00000319172 TTC19Q6DKK2 380 aaPredicted RBP9.89□□□□□ -0.83
TMEM39A-201ENST00000319172 NOTUMQ6P988 496 aa9.89□□□□□ -0.83
TMEM39A-201ENST00000319172 WDR59Q6PJI9 974 aa9.89□□□□□ -0.83
TMEM39A-201ENST00000319172 ABHD15Q6UXT9 468 aa9.89□□□□□ -0.83
TMEM39A-201ENST00000319172 CCDC91Q7Z6B0 441 aa9.89□□□□□ -0.83
TMEM39A-201ENST00000319172 SCN4BQ8IWT1 228 aa9.89□□□□□ -0.83
TMEM39A-201ENST00000319172 CCNYQ8ND76 341 aa9.89□□□□□ -0.83
TMEM39A-201ENST00000319172 MGARPQ8TDB4 240 aa9.89□□□□□ -0.83
TMEM39A-201ENST00000319172 ZBTB10Q96DT7 871 aa9.89□□□□□ -0.83
TMEM39A-201ENST00000319172 LRRIQ3A6PVS8 624 aaPredicted RBP9.89□□□□□ -0.83
TMEM39A-201ENST00000319172 CALCAP01258 141 aa9.89□□□□□ -0.83
TMEM39A-201ENST00000319172 IVLP07476 585 aa9.89□□□□□ -0.83
TMEM39A-201ENST00000319172 SPIRE1Q08AE8 756 aa9.89□□□□□ -0.83
TMEM39A-201ENST00000319172 UBA3Q8TBC4 463 aa9.89□□□□□ -0.83
TMEM39A-201ENST00000319172 C18orf8Q96DM3 657 aa9.89□□□□□ -0.83
TMEM39A-201ENST00000319172 RBM12Q9NTZ6 932 aaKnown RBP9.89□□□□□ -0.83
TMEM39A-201ENST00000319172 STRIP2Q9ULQ0 834 aa9.89□□□□□ -0.83
TMEM39A-201ENST00000319172 SSX2IPQ9Y2D8 614 aa9.89□□□□□ -0.83
TMEM39A-201ENST00000319172 NFASCO94856 1347 aa9.89□□□□□ -0.83
TMEM39A-201ENST00000319172 NHSQ6T4R5 1651 aa9.88□□□□□ -0.83
TMEM39A-201ENST00000319172 PDE4DIPQ5VU43 2346 aa9.88□□□□□ -0.83
TMEM39A-201ENST00000319172 IL18RAPO95256 599 aa9.88□□□□□ -0.83
TMEM39A-201ENST00000319172 VIMP08670 466 aaKnown RBP9.88□□□□□ -0.83
TMEM39A-201ENST00000319172 KRT3P12035 628 aa9.88□□□□□ -0.83
TMEM39A-201ENST00000319172 ANXA13P27216 316 aa9.88□□□□□ -0.83
TMEM39A-201ENST00000319172 THPOP40225 353 aa9.88□□□□□ -0.83
TMEM39A-201ENST00000319172 SLCO1A2P46721 670 aa9.88□□□□□ -0.83
TMEM39A-201ENST00000319172 CDK17Q00537 523 aa9.88□□□□□ -0.83
TMEM39A-201ENST00000319172 C1orf131Q8NDD1 294 aaKnown RBP9.88□□□□□ -0.83
TMEM39A-201ENST00000319172 FMO2Q99518 471 aa9.88□□□□□ -0.83
TMEM39A-201ENST00000319172 CGRRF1Q99675 332 aa9.88□□□□□ -0.83
TMEM39A-201ENST00000319172 NKIRAS1Q9NYS0 192 aa9.88□□□□□ -0.83
TMEM39A-201ENST00000319172 RBPJLQ9UBG7 517 aa9.88□□□□□ -0.83
TMEM39A-201ENST00000319172 GOLGA6L7A0A1B0GV03 622 aa9.88□□□□□ -0.83
TMEM39A-201ENST00000319172 NOVP48745 357 aa9.88□□□□□ -0.83
TMEM39A-201ENST00000319172 BASP1P80723 227 aaKnown RBP9.88□□□□□ -0.83
TMEM39A-201ENST00000319172 CDC42EP1Q00587 391 aa9.88□□□□□ -0.83
TMEM39A-201ENST00000319172 CAPSQ13938 189 aa9.88□□□□□ -0.83
TMEM39A-201ENST00000319172 PALM2Q8IXS6 379 aa9.88□□□□□ -0.83
TMEM39A-201ENST00000319172 LRRN4CLQ8ND94 238 aa9.88□□□□□ -0.83
TMEM39A-201ENST00000319172 BSNDQ8WZ55 320 aa9.88□□□□□ -0.83
TMEM39A-201ENST00000319172 MCEEQ96PE7 176 aa9.88□□□□□ -0.83
TMEM39A-201ENST00000319172 PARVAQ9NVD7 372 aa9.88□□□□□ -0.83
TMEM39A-201ENST00000319172 AIPL1Q9NZN9 384 aa9.88□□□□□ -0.83
TMEM39A-201ENST00000319172 FAN1Q9Y2M0 1017 aa9.88□□□□□ -0.83
TMEM39A-201ENST00000319172 A0A0G2JLL6 359 aaPredicted RBP9.88□□□□□ -0.83
TMEM39A-201ENST00000319172 MCF2LO15068 1137 aa9.88□□□□□ -0.83
TMEM39A-201ENST00000319172 TRPA1O75762 1119 aa9.88□□□□□ -0.83
TMEM39A-201ENST00000319172 CHRM1P11229 460 aaPredicted RBP9.88□□□□□ -0.83
TMEM39A-201ENST00000319172 LCP1P13796 627 aa9.88□□□□□ -0.83
TMEM39A-201ENST00000319172 SDC4P31431 198 aa9.88□□□□□ -0.83
TMEM39A-201ENST00000319172 RAP1GAPP47736 663 aa9.88□□□□□ -0.83
TMEM39A-201ENST00000319172 CYP4A22Q5TCH4 519 aa9.88□□□□□ -0.83
TMEM39A-201ENST00000319172 DARS2Q6PI48 645 aaKnown RBP9.88□□□□□ -0.83
TMEM39A-201ENST00000319172 PRRT2Q7Z6L0 340 aaPredicted RBP9.88□□□□□ -0.83
TMEM39A-201ENST00000319172 ANKRD42Q8N9B4 389 aa9.88□□□□□ -0.83
TMEM39A-201ENST00000319172 ZNF560Q96MR9 790 aa9.88□□□□□ -0.83
TMEM39A-201ENST00000319172 FAM118BQ9BPY3 351 aa9.88□□□□□ -0.83
TMEM39A-201ENST00000319172 L2HGDHQ9H9P8 463 aa9.88□□□□□ -0.83
TMEM39A-201ENST00000319172 ANAPC5Q9UJX4 755 aa9.88□□□□□ -0.83
TMEM39A-201ENST00000319172 TTC7AQ9ULT0 858 aaPredicted RBP9.88□□□□□ -0.83
TMEM39A-201ENST00000319172 PAPPAQ13219 1627 aa9.88□□□□□ -0.83
TMEM39A-201ENST00000319172 CCDC88AQ3V6T2 1871 aa9.87□□□□□ -0.83
TMEM39A-201ENST00000319172 HGSO14964 777 aaPredicted RBP9.87□□□□□ -0.83
TMEM39A-201ENST00000319172 SART1O43290 800 aaKnown RBP9.87□□□□□ -0.83
TMEM39A-201ENST00000319172 ARL4AP40617 200 aa9.87□□□□□ -0.83
TMEM39A-201ENST00000319172 GYS2P54840 703 aa9.87□□□□□ -0.83
TMEM39A-201ENST00000319172 CDR2Q01850 454 aa9.87□□□□□ -0.83
TMEM39A-201ENST00000319172 ADCY1Q08828 1119 aa9.87□□□□□ -0.83
TMEM39A-201ENST00000319172 MEA1Q16626 185 aa9.87□□□□□ -0.83
TMEM39A-201ENST00000319172 KYAT1Q16773 422 aa9.87□□□□□ -0.83
TMEM39A-201ENST00000319172 CHADLQ6NUI6 762 aa9.87□□□□□ -0.83
TMEM39A-201ENST00000319172 RGMBQ6NW40 437 aa9.87□□□□□ -0.83
TMEM39A-201ENST00000319172 RHOT1Q8IXI2 618 aa9.87□□□□□ -0.83
TMEM39A-201ENST00000319172 TPCN2Q8NHX9 752 aa9.87□□□□□ -0.83
TMEM39A-201ENST00000319172 CYFIP2Q96F07 1278 aa9.87□□□□□ -0.83
TMEM39A-201ENST00000319172 TXNRD2Q9NNW7 524 aa9.87□□□□□ -0.83
TMEM39A-201ENST00000319172 HEY1Q9Y5J3 304 aa9.87□□□□□ -0.83
TMEM39A-201ENST00000319172 ACKR2O00590 384 aa9.87□□□□□ -0.83
TMEM39A-201ENST00000319172 NDUFAB1O14561 156 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms