RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 K7ENM7 598 aa18.35■□□□□ 0.53
SCAMP4-201ENST00000316097 MAFGO15525 162 aa18.35■□□□□ 0.53
SCAMP4-201ENST00000316097 RIPK2O43353 540 aa18.35■□□□□ 0.53
SCAMP4-201ENST00000316097 PHF2O75151 1096 aa18.35■□□□□ 0.53
SCAMP4-201ENST00000316097 KRT16P08779 473 aa18.35■□□□□ 0.53
SCAMP4-201ENST00000316097 CYP2J2P51589 502 aa18.35■□□□□ 0.53
SCAMP4-201ENST00000316097 PEX3P56589 373 aa18.35■□□□□ 0.53
SCAMP4-201ENST00000316097 LY6KQ17RY6 165 aa18.35■□□□□ 0.53
SCAMP4-201ENST00000316097 GNPTABQ3T906 1256 aa18.35■□□□□ 0.53
SCAMP4-201ENST00000316097 TAOK1Q7L7X3 1001 aa18.35■□□□□ 0.53
SCAMP4-201ENST00000316097 STMN4Q9H169 189 aaPredicted RBP18.35■□□□□ 0.53
SCAMP4-201ENST00000316097 TAS2R14Q9NYV8 317 aa18.35■□□□□ 0.53
SCAMP4-201ENST00000316097 OAS1P00973 400 aaKnown RBP18.34■□□□□ 0.53
SCAMP4-201ENST00000316097 GCKP35557 465 aa18.34■□□□□ 0.53
SCAMP4-201ENST00000316097 BMT2Q1RMZ1 405 aa18.34■□□□□ 0.53
SCAMP4-201ENST00000316097 FASTKD5Q7L8L6 764 aaKnown RBP18.34■□□□□ 0.53
SCAMP4-201ENST00000316097 CROCCP2Q86T23 111 aa18.34■□□□□ 0.53
SCAMP4-201ENST00000316097 DNERQ8NFT8 737 aa18.34■□□□□ 0.53
SCAMP4-201ENST00000316097 CEP170P1Q96L14 293 aa18.34■□□□□ 0.53
SCAMP4-201ENST00000316097 FBXO40Q9UH90 709 aa18.34■□□□□ 0.53
SCAMP4-201ENST00000316097 LCTP09848 1927 aa18.34■□□□□ 0.53
SCAMP4-201ENST00000316097 KIAA1217Q5T5P2 1943 aa18.34■□□□□ 0.53
SCAMP4-201ENST00000316097 SLC16A4O15374 487 aa18.34■□□□□ 0.53
SCAMP4-201ENST00000316097 SNAPC2Q13487 334 aa18.34■□□□□ 0.53
SCAMP4-201ENST00000316097 DRAP1Q14919 205 aaPredicted RBP18.34■□□□□ 0.53
SCAMP4-201ENST00000316097 EXOC3L1Q86VI1 746 aa18.34■□□□□ 0.53
SCAMP4-201ENST00000316097 CCDC25Q86WR0 208 aa18.34■□□□□ 0.53
SCAMP4-201ENST00000316097 ZSWIM2Q8NEG5 633 aa18.34■□□□□ 0.53
SCAMP4-201ENST00000316097 IWS1Q96ST2 819 aa18.34■□□□□ 0.53
SCAMP4-201ENST00000316097 PCIF1Q9H4Z3 704 aa18.34■□□□□ 0.53
SCAMP4-201ENST00000316097 MLXIPLQ9NP71 852 aa18.34■□□□□ 0.53
SCAMP4-201ENST00000316097 COG5Q9UP83 839 aa18.34■□□□□ 0.53
SCAMP4-201ENST00000316097 PFASO15067 1338 aa18.33■□□□□ 0.53
SCAMP4-201ENST00000316097 SUN1O94901 812 aa18.33■□□□□ 0.53
SCAMP4-201ENST00000316097 STBD1O95210 358 aa18.33■□□□□ 0.53
SCAMP4-201ENST00000316097 LYPLA2O95372 231 aa18.33■□□□□ 0.53
SCAMP4-201ENST00000316097 CCND1P24385 295 aa18.33■□□□□ 0.53
SCAMP4-201ENST00000316097 RPL13P26373 211 aaKnown RBP18.33■□□□□ 0.53
SCAMP4-201ENST00000316097 COPS2P61201 443 aa18.33■□□□□ 0.53
SCAMP4-201ENST00000316097 MAP2K1Q02750 393 aaPredicted RBP18.33■□□□□ 0.53
SCAMP4-201ENST00000316097 GALNTL6Q49A17 601 aa18.33■□□□□ 0.53
SCAMP4-201ENST00000316097 TTC27Q6P3X3 843 aa18.33■□□□□ 0.53
SCAMP4-201ENST00000316097 ABHD15Q6UXT9 468 aa18.33■□□□□ 0.53
SCAMP4-201ENST00000316097 ERICH1Q86X53 443 aa18.33■□□□□ 0.53
SCAMP4-201ENST00000316097 SYCP3Q8IZU3 236 aa18.33■□□□□ 0.53
SCAMP4-201ENST00000316097 PRELID2Q8N945 189 aa18.33■□□□□ 0.53
SCAMP4-201ENST00000316097 KCND2Q9NZV8 630 aa18.33■□□□□ 0.53
SCAMP4-201ENST00000316097 PNMA3Q9UL41 463 aa18.33■□□□□ 0.53
SCAMP4-201ENST00000316097 HGSO14964 777 aaPredicted RBP18.33■□□□□ 0.52
SCAMP4-201ENST00000316097 OSBPP22059 807 aa18.33■□□□□ 0.52
SCAMP4-201ENST00000316097 CHRNA3P32297 505 aa18.33■□□□□ 0.52
SCAMP4-201ENST00000316097 ZKSCAN8Q15776 578 aaPredicted RBP18.33■□□□□ 0.52
SCAMP4-201ENST00000316097 NUGGCQ68CJ6 796 aa18.33■□□□□ 0.52
SCAMP4-201ENST00000316097 PALB2Q86YC2 1186 aa18.33■□□□□ 0.52
SCAMP4-201ENST00000316097 KRT35Q92764 455 aa18.33■□□□□ 0.52
SCAMP4-201ENST00000316097 TMEM109Q9BVC6 243 aa18.33■□□□□ 0.52
SCAMP4-201ENST00000316097 HOMER3Q9NSC5 361 aa18.33■□□□□ 0.52
SCAMP4-201ENST00000316097 SEPT9Q9UHD8 586 aaPredicted RBP18.33■□□□□ 0.52
SCAMP4-201ENST00000316097 DNAJC12Q9UKB3 198 aa18.33■□□□□ 0.52
SCAMP4-201ENST00000316097 TMEM110-MUSTN1A8MSY1 372 aa18.32■□□□□ 0.52
SCAMP4-201ENST00000316097 PSAPP07602 524 aa18.32■□□□□ 0.52
SCAMP4-201ENST00000316097 ATP4AP20648 1035 aa18.32■□□□□ 0.52
SCAMP4-201ENST00000316097 UBA1P22314 1058 aaKnown RBP18.32■□□□□ 0.52
SCAMP4-201ENST00000316097 MARCKSL1P49006 195 aa18.32■□□□□ 0.52
SCAMP4-201ENST00000316097 LONRF1Q17RB8 773 aa18.32■□□□□ 0.52
SCAMP4-201ENST00000316097 TNFAIP8L3Q5GJ75 292 aa18.32■□□□□ 0.52
SCAMP4-201ENST00000316097 MICAL1Q8TDZ2 1067 aa18.32■□□□□ 0.52
SCAMP4-201ENST00000316097 FGD4Q96M96 766 aa18.32■□□□□ 0.52
SCAMP4-201ENST00000316097 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.32■□□□□ 0.523e-6■■■■□ 24.5
SCAMP4-201ENST00000316097 LARSQ9P2J5 1176 aaKnown RBP18.32■□□□□ 0.52
SCAMP4-201ENST00000316097 PARP2Q9UGN5 583 aa18.32■□□□□ 0.52
SCAMP4-201ENST00000316097 ANKRD63C9JTQ0 380 aa18.32■□□□□ 0.52
SCAMP4-201ENST00000316097 SLC16A3O15427 465 aaKnown RBP18.32■□□□□ 0.52
SCAMP4-201ENST00000316097 CELF2O95319 508 aaKnown RBP18.32■□□□□ 0.52
SCAMP4-201ENST00000316097 ARIH2O95376 493 aa18.32■□□□□ 0.52
SCAMP4-201ENST00000316097 CREB1P16220 341 aa18.32■□□□□ 0.52
SCAMP4-201ENST00000316097 IRX1P78414 480 aaPredicted RBP18.32■□□□□ 0.52
SCAMP4-201ENST00000316097 PRKCEQ02156 737 aa18.32■□□□□ 0.52
SCAMP4-201ENST00000316097 BNIP1Q12981 228 aa18.32■□□□□ 0.52
SCAMP4-201ENST00000316097 SLMAPQ14BN4 828 aa18.32■□□□□ 0.52
SCAMP4-201ENST00000316097 CCDC137Q6PK04 289 aaKnown RBP18.32■□□□□ 0.52
SCAMP4-201ENST00000316097 BSNDQ8WZ55 320 aa18.32■□□□□ 0.52
SCAMP4-201ENST00000316097 MS4A4AQ96JQ5 239 aa18.32■□□□□ 0.52
SCAMP4-201ENST00000316097 TRIM33Q9UPN9 1127 aa18.32■□□□□ 0.52
SCAMP4-201ENST00000316097 PTPN22Q9Y2R2 807 aa18.32■□□□□ 0.52
SCAMP4-201ENST00000316097 ALG6Q9Y672 507 aa18.32■□□□□ 0.52
SCAMP4-201ENST00000316097 SYNGAP1Q96PV0 1343 aa18.31■□□□□ 0.52
SCAMP4-201ENST00000316097 TMEM120BA0PK00 339 aa18.31■□□□□ 0.52
SCAMP4-201ENST00000316097 GTPBP10A4D1E9 387 aaKnown RBP18.31■□□□□ 0.52
SCAMP4-201ENST00000316097 PDHXO00330 501 aa18.31■□□□□ 0.52
SCAMP4-201ENST00000316097 TNFAIP3P21580 790 aa18.31■□□□□ 0.52
SCAMP4-201ENST00000316097 PEX19P40855 299 aa18.31■□□□□ 0.52
SCAMP4-201ENST00000316097 MTERF2Q49AM1 385 aa18.31■□□□□ 0.52
SCAMP4-201ENST00000316097 ZDHHC14Q8IZN3 488 aa18.31■□□□□ 0.52
SCAMP4-201ENST00000316097 ANKRD42Q8N9B4 389 aa18.31■□□□□ 0.52
SCAMP4-201ENST00000316097 CDHR1Q96JP9 859 aa18.31■□□□□ 0.52
SCAMP4-201ENST00000316097 SENP7Q9BQF6 1050 aa18.31■□□□□ 0.52
SCAMP4-201ENST00000316097 STK33Q9BYT3 514 aa18.31■□□□□ 0.52
SCAMP4-201ENST00000316097 AGPAT3Q9NRZ7 376 aa18.31■□□□□ 0.52
SCAMP4-201ENST00000316097 SLC5A4Q9NY91 659 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms