RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 HIBCHQ6NVY1 386 aaPredicted RBP4.89□□□□□ -1.63
SMCO3-201ENST00000316048 FAM90A1Q86YD7 464 aa4.89□□□□□ -1.63
SMCO3-201ENST00000316048 OR14K1Q8NGZ2 314 aa4.89□□□□□ -1.63
SMCO3-201ENST00000316048 CEP95Q96GE4 821 aa4.89□□□□□ -1.63
SMCO3-201ENST00000316048 KATNBL1Q9H079 304 aa4.89□□□□□ -1.63
SMCO3-201ENST00000316048 MRPL46Q9H2W6 279 aaKnown RBP4.89□□□□□ -1.63
SMCO3-201ENST00000316048 ZNF287Q9HBT7 754 aa4.89□□□□□ -1.63
SMCO3-201ENST00000316048 KIAA1586Q9HCI6 787 aa4.89□□□□□ -1.63
SMCO3-201ENST00000316048 SLAMF7Q9NQ25 335 aa4.89□□□□□ -1.63
SMCO3-201ENST00000316048 OGDHLQ9ULD0 1010 aa4.89□□□□□ -1.63
SMCO3-201ENST00000316048 DNMT1P26358 1616 aaKnown RBP4.89□□□□□ -1.63
SMCO3-201ENST00000316048 CLASP1Q7Z460 1538 aa4.89□□□□□ -1.63
SMCO3-201ENST00000316048 BIN1O00499 593 aa4.88□□□□□ -1.63
SMCO3-201ENST00000316048 CHGBP05060 677 aa4.88□□□□□ -1.63
SMCO3-201ENST00000316048 FLT3LGP49771 235 aa4.88□□□□□ -1.63
SMCO3-201ENST00000316048 ATP2C1P98194 919 aaPredicted RBP4.88□□□□□ -1.63
SMCO3-201ENST00000316048 SSPNQ14714 243 aa4.88□□□□□ -1.63
SMCO3-201ENST00000316048 OR10H5Q8NGA6 315 aa4.88□□□□□ -1.63
SMCO3-201ENST00000316048 MAML1Q92585 1016 aa4.88□□□□□ -1.63
SMCO3-201ENST00000316048 TNPO1Q92973 898 aaKnown RBP4.88□□□□□ -1.63
SMCO3-201ENST00000316048 L2HGDHQ9H9P8 463 aa4.88□□□□□ -1.63
SMCO3-201ENST00000316048 VWA7Q9Y334 891 aa4.88□□□□□ -1.63
SMCO3-201ENST00000316048 CAMSAP2Q08AD1 1489 aa4.88□□□□□ -1.63
SMCO3-201ENST00000316048 ATRNL1Q5VV63 1379 aa4.88□□□□□ -1.63
SMCO3-201ENST00000316048 A0A1B0GTL3 188 aa4.88□□□□□ -1.63
SMCO3-201ENST00000316048 LRRC10BA6NIK2 292 aa4.88□□□□□ -1.63
SMCO3-201ENST00000316048 MATN4O95460 622 aa4.88□□□□□ -1.63
SMCO3-201ENST00000316048 FGAP02671 866 aa4.88□□□□□ -1.63
SMCO3-201ENST00000316048 SMARCA1P28370 1054 aa4.88□□□□□ -1.63
SMCO3-201ENST00000316048 CRHR1P34998 444 aa4.88□□□□□ -1.63
SMCO3-201ENST00000316048 MEOX1P50221 254 aa4.88□□□□□ -1.63
SMCO3-201ENST00000316048 SOX8P57073 446 aa4.88□□□□□ -1.63
SMCO3-201ENST00000316048 ADAM8P78325 824 aa4.88□□□□□ -1.63
SMCO3-201ENST00000316048 DLG4P78352 724 aa4.88□□□□□ -1.63
SMCO3-201ENST00000316048 RAPGEF1Q13905 1077 aa4.88□□□□□ -1.63
SMCO3-201ENST00000316048 TMEM95Q3KNT9 176 aa4.88□□□□□ -1.63
SMCO3-201ENST00000316048 MFSD14BQ5SR56 506 aa4.88□□□□□ -1.63
SMCO3-201ENST00000316048 IZUMO3Q5VZ72 239 aa4.88□□□□□ -1.63
SMCO3-201ENST00000316048 AFMIDQ63HM1 303 aa4.88□□□□□ -1.63
SMCO3-201ENST00000316048 ANKRD53Q8N9V6 530 aa4.88□□□□□ -1.63
SMCO3-201ENST00000316048 PCSK9Q8NBP7 692 aaKnown RBP4.88□□□□□ -1.63
SMCO3-201ENST00000316048 GCDHQ92947 438 aaPredicted RBP4.88□□□□□ -1.63
SMCO3-201ENST00000316048 GFM2Q969S9 779 aaKnown RBP4.88□□□□□ -1.63
SMCO3-201ENST00000316048 RPL10LQ96L21 214 aaKnown RBP4.88□□□□□ -1.63
SMCO3-201ENST00000316048 MPHOSPH9Q99550 1183 aa4.88□□□□□ -1.63
SMCO3-201ENST00000316048 PCDH18Q9HCL0 1135 aa4.88□□□□□ -1.63
SMCO3-201ENST00000316048 CALCOCO1Q9P1Z2 691 aa4.88□□□□□ -1.63
SMCO3-201ENST00000316048 COL20A1Q9P218 1284 aa4.88□□□□□ -1.63
SMCO3-201ENST00000316048 SLC23A1Q9UHI7 598 aa4.88□□□□□ -1.63
SMCO3-201ENST00000316048 ABCC2Q92887 1545 aa4.88□□□□□ -1.63
SMCO3-201ENST00000316048 ABCC10Q5T3U5 1492 aa4.88□□□□□ -1.63
SMCO3-201ENST00000316048 TONSLQ96HA7 1378 aa4.87□□□□□ -1.63
SMCO3-201ENST00000316048 ANKRD30AQ9BXX3 1397 aa4.87□□□□□ -1.63
SMCO3-201ENST00000316048 GCC2Q8IWJ2 1684 aa4.87□□□□□ -1.63
SMCO3-201ENST00000316048 HARSP12081 509 aaKnown RBP4.87□□□□□ -1.63
SMCO3-201ENST00000316048 ALOX15P16050 662 aaPredicted RBP4.87□□□□□ -1.63
SMCO3-201ENST00000316048 CHKAP35790 457 aa4.87□□□□□ -1.63
SMCO3-201ENST00000316048 MAPK10P53779 464 aa4.87□□□□□ -1.63
SMCO3-201ENST00000316048 BPIFB4P59827 614 aa4.87□□□□□ -1.63
SMCO3-201ENST00000316048 CTXN1P60606 82 aa4.87□□□□□ -1.63
SMCO3-201ENST00000316048 DUSP2Q05923 314 aa4.87□□□□□ -1.63
SMCO3-201ENST00000316048 ZNF827Q17R98 1081 aa4.87□□□□□ -1.63
SMCO3-201ENST00000316048 AGBL4Q5VU57 503 aa4.87□□□□□ -1.63
SMCO3-201ENST00000316048 MCTP2Q6DN12 878 aa4.87□□□□□ -1.63
SMCO3-201ENST00000316048 Q6ZUG5 572 aa4.87□□□□□ -1.63
SMCO3-201ENST00000316048 DPP9Q86TI2 863 aa4.87□□□□□ -1.63
SMCO3-201ENST00000316048 ZSCAN18Q8TBC5 510 aaPredicted RBP4.87□□□□□ -1.63
SMCO3-201ENST00000316048 BRIX1Q8TDN6 353 aaKnown RBP4.87□□□□□ -1.63
SMCO3-201ENST00000316048 C18orf8Q96DM3 657 aa4.87□□□□□ -1.63
SMCO3-201ENST00000316048 YTHDC1Q96MU7 727 aaKnown RBP4.87□□□□□ -1.63
SMCO3-201ENST00000316048 ARFGAP3Q9NP61 516 aa4.87□□□□□ -1.63
SMCO3-201ENST00000316048 PNPLA8Q9NP80 782 aa4.87□□□□□ -1.63
SMCO3-201ENST00000316048 SARS2Q9NP81 518 aaKnown RBP4.87□□□□□ -1.63
SMCO3-201ENST00000316048 SACM1LQ9NTJ5 587 aa4.87□□□□□ -1.63
SMCO3-201ENST00000316048 TMEM140Q9NV12 185 aa4.87□□□□□ -1.63
SMCO3-201ENST00000316048 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.87□□□□□ -1.63
SMCO3-201ENST00000316048 UHRF1BP1LA0JNW5 1464 aa4.87□□□□□ -1.63
SMCO3-201ENST00000316048 A0A087WV62 115 aa4.87□□□□□ -1.63
SMCO3-201ENST00000316048 PRSS29PA6NIE9 313 aa4.87□□□□□ -1.63
SMCO3-201ENST00000316048 SEMA7AO75326 666 aa4.87□□□□□ -1.63
SMCO3-201ENST00000316048 PARP1P09874 1014 aaKnown RBP4.87□□□□□ -1.63
SMCO3-201ENST00000316048 RPL13P26373 211 aaKnown RBP4.87□□□□□ -1.63
SMCO3-201ENST00000316048 SLC6A4P31645 630 aa4.87□□□□□ -1.63
SMCO3-201ENST00000316048 CSF2RBP32927 897 aa4.87□□□□□ -1.63
SMCO3-201ENST00000316048 WNT3AP56704 352 aa4.87□□□□□ -1.63
SMCO3-201ENST00000316048 RPS16P62249 146 aaKnown RBP4.87□□□□□ -1.63
SMCO3-201ENST00000316048 DAG1Q14118 895 aa4.87□□□□□ -1.63
SMCO3-201ENST00000316048 KRT72Q14CN4 511 aa4.87□□□□□ -1.63
SMCO3-201ENST00000316048 VWA3BQ502W6 1294 aa4.87□□□□□ -1.63
SMCO3-201ENST00000316048 MYLK4Q86YV6 388 aaPredicted RBP4.87□□□□□ -1.63
SMCO3-201ENST00000316048 NKAPQ8N5F7 415 aaKnown RBP4.87□□□□□ -1.63
SMCO3-201ENST00000316048 SLC35B2Q8TB61 432 aa4.87□□□□□ -1.63
SMCO3-201ENST00000316048 CYFIP2Q96F07 1278 aa4.87□□□□□ -1.63
SMCO3-201ENST00000316048 FAM167AQ96KS9 214 aa4.87□□□□□ -1.63
SMCO3-201ENST00000316048 KCNH6Q9H252 994 aa4.87□□□□□ -1.63
SMCO3-201ENST00000316048 PRDM16Q9HAZ2 1276 aa4.87□□□□□ -1.63
SMCO3-201ENST00000316048 ZFP64Q9NPA5 681 aa4.87□□□□□ -1.63
SMCO3-201ENST00000316048 STARD7Q9NQZ5 370 aa4.87□□□□□ -1.63
SMCO3-201ENST00000316048 NCDNQ9UBB6 729 aa4.87□□□□□ -1.63
SMCO3-201ENST00000316048 NCOA1Q15788 1441 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 157 ms