RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 CTTNBP2NLQ9P2B4 639 aa8.15□□□□□ -1.1
TRIM55-202ENST00000315962 NXF1Q9UBU9 619 aaKnown RBP8.15□□□□□ -1.1
TRIM55-202ENST00000315962 AMACRQ9UHK6 382 aa8.15□□□□□ -1.1
TRIM55-202ENST00000315962 RBBP6Q7Z6E9 1792 aaKnown RBP8.15□□□□□ -1.11
TRIM55-202ENST00000315962 ADCY3O60266 1144 aa8.15□□□□□ -1.11
TRIM55-202ENST00000315962 MAFO75444 373 aaPredicted RBP8.15□□□□□ -1.11
TRIM55-202ENST00000315962 LGALS2P05162 132 aa8.15□□□□□ -1.11
TRIM55-202ENST00000315962 NAMPTP43490 491 aa8.15□□□□□ -1.11
TRIM55-202ENST00000315962 PSEN1P49768 467 aa8.15□□□□□ -1.11
TRIM55-202ENST00000315962 BEX3Q00994 111 aa8.15□□□□□ -1.11
TRIM55-202ENST00000315962 MESDQ14696 234 aa8.15□□□□□ -1.11
TRIM55-202ENST00000315962 PTGISQ16647 500 aa8.15□□□□□ -1.11
TRIM55-202ENST00000315962 EMBQ6PCB8 327 aa8.15□□□□□ -1.11
TRIM55-202ENST00000315962 PEX26Q7Z412 305 aa8.15□□□□□ -1.11
TRIM55-202ENST00000315962 NLRP14Q86W24 1093 aa8.15□□□□□ -1.11
TRIM55-202ENST00000315962 IFT20Q8IY31 132 aa8.15□□□□□ -1.11
TRIM55-202ENST00000315962 MYCBPAPQ8TBZ2 947 aa8.15□□□□□ -1.11
TRIM55-202ENST00000315962 CTNNBL1Q8WYA6 563 aaPredicted RBP8.15□□□□□ -1.11
TRIM55-202ENST00000315962 NIFKQ9BYG3 293 aaKnown RBP8.15□□□□□ -1.11
TRIM55-202ENST00000315962 ST6GALNAC4Q9H4F1 302 aa8.15□□□□□ -1.11
TRIM55-202ENST00000315962 APOBEC3GQ9HC16 384 aaKnown RBP8.15□□□□□ -1.11
TRIM55-202ENST00000315962 FLRT1Q9NZU1 646 aa8.15□□□□□ -1.11
TRIM55-202ENST00000315962 PNMA3Q9UL41 463 aa8.15□□□□□ -1.11
TRIM55-202ENST00000315962 HES2Q9Y543 173 aa8.15□□□□□ -1.11
TRIM55-202ENST00000315962 UBE4BO95155 1302 aa8.15□□□□□ -1.11
TRIM55-202ENST00000315962 H3BRB1 525 aa8.14□□□□□ -1.11
TRIM55-202ENST00000315962 DAPK3O43293 454 aa8.14□□□□□ -1.11
TRIM55-202ENST00000315962 MSCO60682 206 aa8.14□□□□□ -1.11
TRIM55-202ENST00000315962 VNN1O95497 513 aa8.14□□□□□ -1.11
TRIM55-202ENST00000315962 HLA-DRAP01903 254 aa8.14□□□□□ -1.11
TRIM55-202ENST00000315962 CYP11B1P15538 503 aa8.14□□□□□ -1.11
TRIM55-202ENST00000315962 MARCKSL1P49006 195 aa8.14□□□□□ -1.11
TRIM55-202ENST00000315962 ZNF200P98182 395 aaPredicted RBP8.14□□□□□ -1.11
TRIM55-202ENST00000315962 ARHGAP1Q07960 439 aa8.14□□□□□ -1.11
TRIM55-202ENST00000315962 DHX9Q08211 1270 aaKnown RBP8.14□□□□□ -1.11
TRIM55-202ENST00000315962 ALCAMQ13740 583 aa8.14□□□□□ -1.11
TRIM55-202ENST00000315962 MAPK6Q16659 721 aa8.14□□□□□ -1.11
TRIM55-202ENST00000315962 FAM182AQ5T1J6 154 aa8.14□□□□□ -1.11
TRIM55-202ENST00000315962 EPS8L1Q8TE68 723 aa8.14□□□□□ -1.11
TRIM55-202ENST00000315962 ATP8B4Q8TF62 1192 aa8.14□□□□□ -1.11
TRIM55-202ENST00000315962 NT5C1BQ96P26 610 aa8.14□□□□□ -1.11
TRIM55-202ENST00000315962 TRIM51Q9BSJ1 452 aa8.14□□□□□ -1.11
TRIM55-202ENST00000315962 TUT1Q9H6E5 874 aaKnown RBP8.14□□□□□ -1.11
TRIM55-202ENST00000315962 TMEM8AQ9HCN3 771 aa8.14□□□□□ -1.11
TRIM55-202ENST00000315962 HAUS2Q9NVX0 235 aa8.14□□□□□ -1.11
TRIM55-202ENST00000315962 CNOT8Q9UFF9 292 aaKnown RBP8.14□□□□□ -1.11
TRIM55-202ENST00000315962 NR2E1Q9Y466 385 aa8.14□□□□□ -1.11
TRIM55-202ENST00000315962 A0A0B4J269 797 aa8.14□□□□□ -1.11
TRIM55-202ENST00000315962 CLGNO14967 610 aa8.14□□□□□ -1.11
TRIM55-202ENST00000315962 MEFVO15553 781 aaPredicted RBP8.14□□□□□ -1.11
TRIM55-202ENST00000315962 EXTL3O43909 919 aa8.14□□□□□ -1.11
TRIM55-202ENST00000315962 PRKCBP05771 671 aa8.14□□□□□ -1.11
TRIM55-202ENST00000315962 CXCL8P10145 99 aa8.14□□□□□ -1.11
TRIM55-202ENST00000315962 CHRNB2P17787 502 aa8.14□□□□□ -1.11
TRIM55-202ENST00000315962 CTNNA1P35221 906 aaKnown RBP8.14□□□□□ -1.11
TRIM55-202ENST00000315962 HSD17B3P37058 310 aa8.14□□□□□ -1.11
TRIM55-202ENST00000315962 CCNA1P78396 465 aa8.14□□□□□ -1.11
TRIM55-202ENST00000315962 PAK2Q13177 524 aa8.14□□□□□ -1.11
TRIM55-202ENST00000315962 UAP1Q16222 522 aaPredicted RBP8.14□□□□□ -1.11
TRIM55-202ENST00000315962 NFIL3Q16649 462 aa8.14□□□□□ -1.11
TRIM55-202ENST00000315962 MAMDC4Q6UXC1 1216 aa8.14□□□□□ -1.11
TRIM55-202ENST00000315962 IQCKQ8N0W5 287 aa8.14□□□□□ -1.11
TRIM55-202ENST00000315962 TPCN2Q8NHX9 752 aa8.14□□□□□ -1.11
TRIM55-202ENST00000315962 NLRP7Q8WX94 980 aa8.14□□□□□ -1.11
TRIM55-202ENST00000315962 MFSD14AQ96MC6 490 aa8.14□□□□□ -1.11
TRIM55-202ENST00000315962 C17orf75Q9HAS0 396 aa8.14□□□□□ -1.11
TRIM55-202ENST00000315962 LUC7LQ9NQ29 371 aaKnown RBP8.14□□□□□ -1.11
TRIM55-202ENST00000315962 NOVA2Q9UNW9 492 aaKnown RBP8.14□□□□□ -1.11
TRIM55-202ENST00000315962 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.14□□□□□ -1.11
TRIM55-202ENST00000315962 NUB1Q9Y5A7 615 aa8.14□□□□□ -1.11
TRIM55-202ENST00000315962 BZW2Q9Y6E2 419 aaKnown RBP8.14□□□□□ -1.11
TRIM55-202ENST00000315962 TLDC2A0PJX2 215 aa8.13□□□□□ -1.11
TRIM55-202ENST00000315962 TTI1O43156 1089 aa8.13□□□□□ -1.11
TRIM55-202ENST00000315962 PJA2O43164 708 aa8.13□□□□□ -1.11
TRIM55-202ENST00000315962 CPP00450 1065 aa8.13□□□□□ -1.11
TRIM55-202ENST00000315962 PRKCIP41743 596 aa8.13□□□□□ -1.11
TRIM55-202ENST00000315962 RAP1GAPP47736 663 aa8.13□□□□□ -1.11
TRIM55-202ENST00000315962 MFAP3P55082 362 aa8.13□□□□□ -1.11
TRIM55-202ENST00000315962 CDH8P55286 799 aa8.13□□□□□ -1.11
TRIM55-202ENST00000315962 MYL6P60660 151 aa8.13□□□□□ -1.11
TRIM55-202ENST00000315962 RPS6KA1Q15418 735 aa8.13□□□□□ -1.11
TRIM55-202ENST00000315962 ZNF792Q3KQV3 632 aa8.13□□□□□ -1.11
TRIM55-202ENST00000315962 ZNF568Q3ZCX4 644 aa8.13□□□□□ -1.11
TRIM55-202ENST00000315962 CCDC13Q8IYE1 715 aa8.13□□□□□ -1.11
TRIM55-202ENST00000315962 MAML3Q96JK9 1138 aa8.13□□□□□ -1.11
TRIM55-202ENST00000315962 FBXL18Q96ME1 805 aa8.13□□□□□ -1.11
TRIM55-202ENST00000315962 MPHOSPH6Q99547 160 aaKnown RBP8.13□□□□□ -1.11
TRIM55-202ENST00000315962 TIPINQ9BVW5 301 aa8.13□□□□□ -1.11
TRIM55-202ENST00000315962 SMARCAD1Q9H4L7 1026 aa8.13□□□□□ -1.11
TRIM55-202ENST00000315962 CDHR5Q9HBB8 845 aa8.13□□□□□ -1.11
TRIM55-202ENST00000315962 C1orf112Q9NSG2 853 aa8.13□□□□□ -1.11
TRIM55-202ENST00000315962 ERAP1Q9NZ08 941 aa8.13□□□□□ -1.11
TRIM55-202ENST00000315962 FBXL5Q9UKA1 691 aa8.13□□□□□ -1.11
TRIM55-202ENST00000315962 EIF4E1BA6NMX2 242 aaKnown RBP8.13□□□□□ -1.11
TRIM55-202ENST00000315962 PIK3R2O00459 728 aa8.13□□□□□ -1.11
TRIM55-202ENST00000315962 GJC1P36383 396 aa8.13□□□□□ -1.11
TRIM55-202ENST00000315962 FNTAP49354 379 aa8.13□□□□□ -1.11
TRIM55-202ENST00000315962 TAF1CQ15572 869 aaPredicted RBP8.13□□□□□ -1.11
TRIM55-202ENST00000315962 MEI1Q5TIA1 1274 aa8.13□□□□□ -1.11
TRIM55-202ENST00000315962 KRT35Q92764 455 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms