RNA–Protein interactions for RNA: ENST00000315571.5

LDLRAD3-201, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAD3, Length 3,798 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-201ENST00000315571 ERO1BQ86YB8 467 aa12.39□□□□□ -0.43
LDLRAD3-201ENST00000315571 MTMR8Q96EF0 704 aa12.39□□□□□ -0.43
LDLRAD3-201ENST00000315571 TUBGCP5Q96RT8 1024 aa12.39□□□□□ -0.43
LDLRAD3-201ENST00000315571 CCT7Q99832 543 aa12.39□□□□□ -0.43
LDLRAD3-201ENST00000315571 ASCC2Q9H1I8 757 aaPredicted RBP12.39□□□□□ -0.43
LDLRAD3-201ENST00000315571 MYLK2Q9H1R3 596 aa12.39□□□□□ -0.43
LDLRAD3-201ENST00000315571 CPVLQ9H3G5 476 aa12.39□□□□□ -0.43
LDLRAD3-201ENST00000315571 V9GY48 417 aaPredicted RBP12.39□□□□□ -0.43
LDLRAD3-201ENST00000315571 PRCPP42785 496 aa12.39□□□□□ -0.43
LDLRAD3-201ENST00000315571 LSAMPQ13449 338 aa12.39□□□□□ -0.43
LDLRAD3-201ENST00000315571 KHDC1Q4VXA5 237 aaKnown RBP12.39□□□□□ -0.43
LDLRAD3-201ENST00000315571 FAM83BQ5T0W9 1011 aa12.39□□□□□ -0.43
LDLRAD3-201ENST00000315571 FYB2Q5VWT5 728 aa12.39□□□□□ -0.43
LDLRAD3-201ENST00000315571 FOXB2Q5VYV0 432 aa12.39□□□□□ -0.43
LDLRAD3-201ENST00000315571 TMEM214Q6NUQ4 689 aaKnown RBP12.39□□□□□ -0.43
LDLRAD3-201ENST00000315571 C1orf228Q6PIY5 440 aa12.39□□□□□ -0.43
LDLRAD3-201ENST00000315571 USP38Q8NB14 1042 aa12.39□□□□□ -0.43
LDLRAD3-201ENST00000315571 HIPK4Q8NE63 616 aa12.39□□□□□ -0.43
LDLRAD3-201ENST00000315571 ZNF317Q96PQ6 595 aaPredicted RBP12.39□□□□□ -0.43
LDLRAD3-201ENST00000315571 TRIM17Q9Y577 477 aa12.39□□□□□ -0.43
LDLRAD3-201ENST00000315571 hCG_1642624A0A1W2PR95 340 aa12.38□□□□□ -0.43
LDLRAD3-201ENST00000315571 TRIM64CA6NLI5 447 aa12.38□□□□□ -0.43
LDLRAD3-201ENST00000315571 DCTN3O75935 186 aa12.38□□□□□ -0.43
LDLRAD3-201ENST00000315571 ITGBL1O95965 494 aaPredicted RBP12.38□□□□□ -0.43
LDLRAD3-201ENST00000315571 PAEPP09466 180 aa12.38□□□□□ -0.43
LDLRAD3-201ENST00000315571 BACE1P56817 501 aa12.38□□□□□ -0.43
LDLRAD3-201ENST00000315571 KIF22Q14807 665 aa12.38□□□□□ -0.43
LDLRAD3-201ENST00000315571 FAAH2Q6GMR7 532 aa12.38□□□□□ -0.43
LDLRAD3-201ENST00000315571 LPAR1Q92633 364 aa12.38□□□□□ -0.43
LDLRAD3-201ENST00000315571 RNF26Q9BY78 433 aaPredicted RBP12.38□□□□□ -0.43
LDLRAD3-201ENST00000315571 SEC63Q9UGP8 760 aaKnown RBP12.38□□□□□ -0.43
LDLRAD3-201ENST00000315571 CROTQ9UKG9 612 aa12.38□□□□□ -0.43
LDLRAD3-201ENST00000315571 TMED5Q9Y3A6 229 aa12.38□□□□□ -0.43
LDLRAD3-201ENST00000315571 ARHGAP42A6NI28 874 aa12.38□□□□□ -0.43
LDLRAD3-201ENST00000315571 DEXIO95424 95 aa12.38□□□□□ -0.43
LDLRAD3-201ENST00000315571 SLC16A2P36021 539 aa12.38□□□□□ -0.43
LDLRAD3-201ENST00000315571 HALP42357 657 aa12.38□□□□□ -0.43
LDLRAD3-201ENST00000315571 HMGCS2P54868 508 aa12.38□□□□□ -0.43
LDLRAD3-201ENST00000315571 IL9RQ01113 521 aa12.38□□□□□ -0.43
LDLRAD3-201ENST00000315571 DSG1Q02413 1049 aa12.38□□□□□ -0.43
LDLRAD3-201ENST00000315571 GRAMD1BQ3KR37 738 aa12.38□□□□□ -0.43
LDLRAD3-201ENST00000315571 WASHC2DQ5SRD0 308 aa12.38□□□□□ -0.43
LDLRAD3-201ENST00000315571 SRRM1Q8IYB3 904 aaKnown RBP12.38□□□□□ -0.43
LDLRAD3-201ENST00000315571 CNOT6LQ96LI5 555 aaKnown RBP12.38□□□□□ -0.43
LDLRAD3-201ENST00000315571 STK33Q9BYT3 514 aa12.38□□□□□ -0.43
LDLRAD3-201ENST00000315571 DKK3Q9UBP4 350 aa12.38□□□□□ -0.43
LDLRAD3-201ENST00000315571 GREB1LQ9C091 1923 aaPredicted RBP12.38□□□□□ -0.43
LDLRAD3-201ENST00000315571 SPDYE16A6NNV3 312 aaPredicted RBP12.38□□□□□ -0.43
LDLRAD3-201ENST00000315571 C19orf81C9J6K1 198 aa12.38□□□□□ -0.43
LDLRAD3-201ENST00000315571 WDR46O15213 610 aaKnown RBP12.38□□□□□ -0.43
LDLRAD3-201ENST00000315571 WFS1O76024 890 aa12.38□□□□□ -0.43
LDLRAD3-201ENST00000315571 AGTP01019 485 aa12.38□□□□□ -0.43
LDLRAD3-201ENST00000315571 RPN1P04843 607 aaKnown RBP12.38□□□□□ -0.43
LDLRAD3-201ENST00000315571 SPATA31D3P0C874 917 aa12.38□□□□□ -0.43
LDLRAD3-201ENST00000315571 MYCLP1P12525 358 aaPredicted RBP12.38□□□□□ -0.43
LDLRAD3-201ENST00000315571 EEF1GP26641 437 aaKnown RBP12.38□□□□□ -0.43
LDLRAD3-201ENST00000315571 MDM2Q00987 491 aaPredicted RBP12.38□□□□□ -0.43
LDLRAD3-201ENST00000315571 PPATQ06203 517 aa12.38□□□□□ -0.43
LDLRAD3-201ENST00000315571 LONRF1Q17RB8 773 aa12.38□□□□□ -0.43
LDLRAD3-201ENST00000315571 TTBK2Q6IQ55 1244 aa12.38□□□□□ -0.43
LDLRAD3-201ENST00000315571 ARHGEF18Q6ZSZ5 1173 aa12.38□□□□□ -0.43
LDLRAD3-201ENST00000315571 SPATA31D4Q6ZUB0 917 aa12.38□□□□□ -0.43
LDLRAD3-201ENST00000315571 C1orf131Q8NDD1 294 aaKnown RBP12.38□□□□□ -0.43
LDLRAD3-201ENST00000315571 DEPTORQ8TB45 409 aa12.38□□□□□ -0.43
LDLRAD3-201ENST00000315571 GIPC3Q8TF64 312 aa12.38□□□□□ -0.43
LDLRAD3-201ENST00000315571 CENPTQ96BT3 561 aa12.38□□□□□ -0.43
LDLRAD3-201ENST00000315571 STK36Q9NRP7 1315 aa12.37□□□□□ -0.43
LDLRAD3-201ENST00000315571 CETN2P41208 172 aa12.37□□□□□ -0.43
LDLRAD3-201ENST00000315571 RGS2P41220 211 aa12.37□□□□□ -0.43
LDLRAD3-201ENST00000315571 CALCOCO2Q13137 446 aa12.37□□□□□ -0.43
LDLRAD3-201ENST00000315571 MMEL1Q495T6 779 aa12.37□□□□□ -0.43
LDLRAD3-201ENST00000315571 LDLRAD1Q5T700 205 aa12.37□□□□□ -0.43
LDLRAD3-201ENST00000315571 EMC10Q5UCC4 262 aa12.37□□□□□ -0.43
LDLRAD3-201ENST00000315571 KLHDC7AQ5VTJ3 777 aa12.37□□□□□ -0.43
LDLRAD3-201ENST00000315571 B3GNT6Q6ZMB0 384 aa12.37□□□□□ -0.43
LDLRAD3-201ENST00000315571 TMC3Q7Z5M5 1100 aa12.37□□□□□ -0.43
LDLRAD3-201ENST00000315571 SATL1Q86VE3 508 aa12.37□□□□□ -0.43
LDLRAD3-201ENST00000315571 LRRC27Q9C0I9 530 aa12.37□□□□□ -0.43
LDLRAD3-201ENST00000315571 CTNNAL1Q9UBT7 734 aa12.37□□□□□ -0.43
LDLRAD3-201ENST00000315571 ADAMTS1Q9UHI8 967 aa12.37□□□□□ -0.43
LDLRAD3-201ENST00000315571 CARD8Q9Y2G2 431 aa12.37□□□□□ -0.43
LDLRAD3-201ENST00000315571 HEY1Q9Y5J3 304 aa12.37□□□□□ -0.43
LDLRAD3-201ENST00000315571 CNTNAP5Q8WYK1 1306 aa12.37□□□□□ -0.43
LDLRAD3-201ENST00000315571 ARHGAP10A1A4S6 786 aa12.37□□□□□ -0.43
LDLRAD3-201ENST00000315571 TMEM221A6NGB7 291 aa12.37□□□□□ -0.43
LDLRAD3-201ENST00000315571 O00370 1275 aa12.37□□□□□ -0.43
LDLRAD3-201ENST00000315571 PRPF3O43395 683 aaKnown RBP12.37□□□□□ -0.43
LDLRAD3-201ENST00000315571 ESRRAP11474 423 aaPredicted RBP12.37□□□□□ -0.43
LDLRAD3-201ENST00000315571 UBA7P41226 1012 aa12.37□□□□□ -0.43
LDLRAD3-201ENST00000315571 EXOC3L1Q86VI1 746 aa12.37□□□□□ -0.43
LDLRAD3-201ENST00000315571 STKLD1Q8NE28 680 aa12.37□□□□□ -0.43
LDLRAD3-201ENST00000315571 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.37□□□□□ -0.431e-7■■■■■ 87.1
LDLRAD3-201ENST00000315571 CEP295NLQ96MC4 621 aa12.37□□□□□ -0.43
LDLRAD3-201ENST00000315571 AFG3L2Q9Y4W6 797 aa12.37□□□□□ -0.43
LDLRAD3-201ENST00000315571 LRRC53A6NM62 1247 aa12.37□□□□□ -0.43
LDLRAD3-201ENST00000315571 KDM1AO60341 852 aa12.37□□□□□ -0.43
LDLRAD3-201ENST00000315571 GNAZP19086 355 aa12.37□□□□□ -0.43
LDLRAD3-201ENST00000315571 MCM7P33993 719 aa12.37□□□□□ -0.43
LDLRAD3-201ENST00000315571 HUNKP57058 714 aa12.37□□□□□ -0.43
LDLRAD3-201ENST00000315571 PPP2R5CQ13362 524 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms