RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 SPATA31A5Q5VU36 1347 aa14.54□□□□□ -0.08
SPAST-201ENST00000315285 SPATA31A7Q8IWB4 1347 aa14.54□□□□□ -0.08
SPAST-201ENST00000315285 KCNN4O15554 427 aa14.53□□□□□ -0.08
SPAST-201ENST00000315285 PDGFRAP16234 1089 aa14.53□□□□□ -0.08
SPAST-201ENST00000315285 NME3Q13232 169 aa14.53□□□□□ -0.08
SPAST-201ENST00000315285 MXD4Q14582 209 aaPredicted RBP14.53□□□□□ -0.08
SPAST-201ENST00000315285 KYAT1Q16773 422 aa14.53□□□□□ -0.08
SPAST-201ENST00000315285 EPC2Q52LR7 807 aa14.53□□□□□ -0.08
SPAST-201ENST00000315285 KCNV1Q6PIU1 500 aa14.53□□□□□ -0.08
SPAST-201ENST00000315285 FAM167BQ9BTA0 163 aa14.53□□□□□ -0.08
SPAST-201ENST00000315285 PSMC3IPQ9P2W1 217 aaPredicted RBP14.53□□□□□ -0.08
SPAST-201ENST00000315285 IGSF9BQ9UPX0 1349 aa14.53□□□□□ -0.08
SPAST-201ENST00000315285 POLRMTO00411 1230 aaKnown RBP14.53□□□□□ -0.08
SPAST-201ENST00000315285 GSTA4O15217 222 aa14.53□□□□□ -0.08
SPAST-201ENST00000315285 COILP38432 576 aaPredicted RBP14.53□□□□□ -0.08
SPAST-201ENST00000315285 ITGA8P53708 1063 aa14.53□□□□□ -0.08
SPAST-201ENST00000315285 PMS1P54277 932 aaKnown RBP14.53□□□□□ -0.08
SPAST-201ENST00000315285 ITPRIPL1Q6GPH6 555 aa14.53□□□□□ -0.08
SPAST-201ENST00000315285 THEM5Q8N1Q8 247 aa14.53□□□□□ -0.08
SPAST-201ENST00000315285 TSC22D3Q99576 134 aa14.53□□□□□ -0.08
SPAST-201ENST00000315285 PI4K2AQ9BTU6 479 aa14.53□□□□□ -0.08
SPAST-201ENST00000315285 PACSIN1Q9BY11 444 aa14.53□□□□□ -0.08
SPAST-201ENST00000315285 SUDS3Q9H7L9 328 aaPredicted RBP14.53□□□□□ -0.08
SPAST-201ENST00000315285 ANKEF1Q9NU02 776 aa14.53□□□□□ -0.08
SPAST-201ENST00000315285 DMGDHQ9UI17 866 aaKnown RBP14.53□□□□□ -0.08
SPAST-201ENST00000315285 XPAP23025 273 aaPredicted RBP14.53□□□□□ -0.08
SPAST-201ENST00000315285 RASSF3Q86WH2 238 aa14.53□□□□□ -0.08
SPAST-201ENST00000315285 ACAP3Q96P50 834 aa14.53□□□□□ -0.08
SPAST-201ENST00000315285 RTFDC1Q9BY42 306 aaPredicted RBP14.53□□□□□ -0.08
SPAST-201ENST00000315285 UBN1Q9NPG3 1134 aa14.53□□□□□ -0.08
SPAST-201ENST00000315285 AGAP1Q9UPQ3 857 aa14.53□□□□□ -0.08
SPAST-201ENST00000315285 FOXN3O00409 490 aaPredicted RBP14.53□□□□□ -0.08
SPAST-201ENST00000315285 AP2B1P63010 937 aa14.53□□□□□ -0.08
SPAST-201ENST00000315285 YWHAHQ04917 246 aaPredicted RBP14.53□□□□□ -0.08
SPAST-201ENST00000315285 DEUP1Q05D60 604 aa14.53□□□□□ -0.08
SPAST-201ENST00000315285 SLC13A5Q86YT5 568 aaPredicted RBP14.53□□□□□ -0.08
SPAST-201ENST00000315285 ORC6Q9Y5N6 252 aa14.53□□□□□ -0.08
SPAST-201ENST00000315285 APRTP07741 180 aa14.52□□□□□ -0.08
SPAST-201ENST00000315285 TXNP10599 105 aaKnown RBP14.52□□□□□ -0.08
SPAST-201ENST00000315285 MAGEA4P43358 317 aa14.52□□□□□ -0.08
SPAST-201ENST00000315285 CASP4P49662 377 aa14.52□□□□□ -0.08
SPAST-201ENST00000315285 RGS9BPQ6ZS82 235 aa14.52□□□□□ -0.08
SPAST-201ENST00000315285 PID1Q7Z2X4 250 aa14.52□□□□□ -0.08
SPAST-201ENST00000315285 ZNF677Q86XU0 584 aa14.52□□□□□ -0.08
SPAST-201ENST00000315285 SEPT1Q8WYJ6 367 aa14.52□□□□□ -0.08
SPAST-201ENST00000315285 ZSWIM1Q9BR11 485 aa14.52□□□□□ -0.08
SPAST-201ENST00000315285 ZFATQ9P243 1243 aa14.52□□□□□ -0.08
SPAST-201ENST00000315285 PIK3R2O00459 728 aa14.52□□□□□ -0.08
SPAST-201ENST00000315285 MAPK7Q13164 816 aa14.52□□□□□ -0.08
SPAST-201ENST00000315285 GIT2Q14161 759 aa14.52□□□□□ -0.08
SPAST-201ENST00000315285 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.52□□□□□ -0.08
SPAST-201ENST00000315285 SYCP2LQ5T4T6 812 aa14.52□□□□□ -0.08
SPAST-201ENST00000315285 TRPM8Q7Z2W7 1104 aa14.52□□□□□ -0.08
SPAST-201ENST00000315285 SCN4BQ8IWT1 228 aa14.52□□□□□ -0.08
SPAST-201ENST00000315285 CCDC138Q96M89 665 aa14.52□□□□□ -0.08
SPAST-201ENST00000315285 UNC45AQ9H3U1 944 aa14.52□□□□□ -0.08
SPAST-201ENST00000315285 ANKZF1Q9H8Y5 726 aa14.52□□□□□ -0.08
SPAST-201ENST00000315285 RAB6BQ9NRW1 208 aa14.52□□□□□ -0.08
SPAST-201ENST00000315285 NDE1Q9NXR1 346 aa14.52□□□□□ -0.08
SPAST-201ENST00000315285 SUN2Q9UH99 717 aa14.52□□□□□ -0.08
SPAST-201ENST00000315285 ACTR2P61160 394 aa14.52□□□□□ -0.09
SPAST-201ENST00000315285 KDM7AQ6ZMT4 941 aa14.52□□□□□ -0.09
SPAST-201ENST00000315285 ALKBH8Q96BT7 664 aaKnown RBP14.52□□□□□ -0.09
SPAST-201ENST00000315285 FGD4Q96M96 766 aa14.52□□□□□ -0.09
SPAST-201ENST00000315285 ZNF560Q96MR9 790 aa14.52□□□□□ -0.09
SPAST-201ENST00000315285 PPCSQ9HAB8 311 aa14.52□□□□□ -0.09
SPAST-201ENST00000315285 CYP4F11Q9HBI6 524 aa14.52□□□□□ -0.09
SPAST-201ENST00000315285 JCADQ9P266 1359 aa14.52□□□□□ -0.09
SPAST-201ENST00000315285 MAFGO15525 162 aa14.52□□□□□ -0.09
SPAST-201ENST00000315285 PFDN1O60925 122 aa14.52□□□□□ -0.09
SPAST-201ENST00000315285 POU5F1BQ06416 359 aa14.52□□□□□ -0.09
SPAST-201ENST00000315285 TBX2Q13207 712 aaPredicted RBP14.52□□□□□ -0.09
SPAST-201ENST00000315285 TRIML2Q8N7C3 387 aa14.52□□□□□ -0.09
SPAST-201ENST00000315285 ZNF280CQ8ND82 737 aa14.52□□□□□ -0.09
SPAST-201ENST00000315285 SCFD1Q8WVM8 642 aa14.52□□□□□ -0.09
SPAST-201ENST00000315285 ARHGEF26Q96DR7 871 aa14.52□□□□□ -0.09
SPAST-201ENST00000315285 NVLO15381 856 aaKnown RBP14.51□□□□□ -0.09
SPAST-201ENST00000315285 EXTL3O43909 919 aa14.51□□□□□ -0.09
SPAST-201ENST00000315285 EEF1B2P24534 225 aaKnown RBP14.51□□□□□ -0.09
SPAST-201ENST00000315285 TSPY1Q01534 308 aa14.51□□□□□ -0.09
SPAST-201ENST00000315285 CENPCQ03188 943 aa14.51□□□□□ -0.09
SPAST-201ENST00000315285 LCP1P13796 627 aa14.51□□□□□ -0.09
SPAST-201ENST00000315285 SREBF1P36956 1147 aa14.51□□□□□ -0.09
SPAST-201ENST00000315285 FNTAP49354 379 aa14.51□□□□□ -0.09
SPAST-201ENST00000315285 CORO7P57737 925 aa14.51□□□□□ -0.09
SPAST-201ENST00000315285 SESN2P58004 480 aaPredicted RBP14.51□□□□□ -0.09
SPAST-201ENST00000315285 NFIAQ12857 509 aa14.51□□□□□ -0.09
SPAST-201ENST00000315285 LRRC31Q6UY01 552 aa14.51□□□□□ -0.09
SPAST-201ENST00000315285 TTC8Q8TAM2 541 aa14.51□□□□□ -0.09
SPAST-201ENST00000315285 PABPC3Q9H361 631 aaKnown RBP14.51□□□□□ -0.09
SPAST-201ENST00000315285 RIOX1Q9H6W3 641 aa14.51□□□□□ -0.09
SPAST-201ENST00000315285 ANLNQ9NQW6 1124 aa14.51□□□□□ -0.09
SPAST-201ENST00000315285 ZC3H7BQ9UGR2 993 aaKnown RBP14.51□□□□□ -0.09
SPAST-201ENST00000315285 A0A087X0B3 334 aa14.51□□□□□ -0.09
SPAST-201ENST00000315285 ASB14A6NK59 587 aa14.51□□□□□ -0.09
SPAST-201ENST00000315285 MORF4L2Q15014 288 aa14.51□□□□□ -0.09
SPAST-201ENST00000315285 TMTC4Q5T4D3 741 aa14.51□□□□□ -0.09
SPAST-201ENST00000315285 LRRN4CLQ8ND94 238 aa14.51□□□□□ -0.09
SPAST-201ENST00000315285 TSSK1BQ9BXA7 367 aa14.51□□□□□ -0.09
SPAST-201ENST00000315285 TMEM39BQ9GZU3 492 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms