RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 RNF186Q9NXI6 227 aa17.96■□□□□ 0.47
CLCF1-201ENST00000312438 TSKSQ9UJT2 592 aa17.96■□□□□ 0.47
CLCF1-201ENST00000312438 RTN2O75298 545 aa17.95■□□□□ 0.46
CLCF1-201ENST00000312438 FTLP02792 175 aaPredicted RBP17.95■□□□□ 0.46
CLCF1-201ENST00000312438 ACO1P21399 889 aaKnown RBP17.95■□□□□ 0.46
CLCF1-201ENST00000312438 HOXA11P31270 313 aaPredicted RBP17.95■□□□□ 0.46
CLCF1-201ENST00000312438 APLP1P51693 650 aa17.95■□□□□ 0.46
CLCF1-201ENST00000312438 MYL6P60660 151 aa17.95■□□□□ 0.46
CLCF1-201ENST00000312438 ZNF200P98182 395 aaPredicted RBP17.95■□□□□ 0.46
CLCF1-201ENST00000312438 DCAF4L1Q3SXM0 396 aa17.95■□□□□ 0.46
CLCF1-201ENST00000312438 TAF3Q5VWG9 929 aa17.95■□□□□ 0.46
CLCF1-201ENST00000312438 ZNF677Q86XU0 584 aa17.95■□□□□ 0.46
CLCF1-201ENST00000312438 PALB2Q86YC2 1186 aa17.95■□□□□ 0.46
CLCF1-201ENST00000312438 DDX1Q92499 740 aaKnown RBP17.95■□□□□ 0.46
CLCF1-201ENST00000312438 PCDHB18PQ96TA0 734 aa17.95■□□□□ 0.46
CLCF1-201ENST00000312438 OSMRQ99650 979 aa17.95■□□□□ 0.46
CLCF1-201ENST00000312438 ACP6Q9NPH0 428 aa17.95■□□□□ 0.46
CLCF1-201ENST00000312438 TAS2R14Q9NYV8 317 aa17.95■□□□□ 0.46
CLCF1-201ENST00000312438 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.95■□□□□ 0.46
CLCF1-201ENST00000312438 SNX12Q9UMY4 172 aa17.95■□□□□ 0.46
CLCF1-201ENST00000312438 CNTN6Q9UQ52 1028 aa17.95■□□□□ 0.46
CLCF1-201ENST00000312438 V9GYY5 206 aaPredicted RBP17.95■□□□□ 0.46
CLCF1-201ENST00000312438 PGK1P00558 417 aa17.95■□□□□ 0.46
CLCF1-201ENST00000312438 MMEP08473 750 aa17.95■□□□□ 0.46
CLCF1-201ENST00000312438 FGFR4P22455 802 aa17.95■□□□□ 0.46
CLCF1-201ENST00000312438 AXLP30530 894 aa17.95■□□□□ 0.46
CLCF1-201ENST00000312438 FMO1Q01740 532 aa17.95■□□□□ 0.46
CLCF1-201ENST00000312438 TRIM32Q13049 653 aa17.95■□□□□ 0.46
CLCF1-201ENST00000312438 ERCC6LQ2NKX8 1250 aa17.95■□□□□ 0.46
CLCF1-201ENST00000312438 SLC10A6Q3KNW5 377 aa17.95■□□□□ 0.46
CLCF1-201ENST00000312438 TAF2Q6P1X5 1199 aa17.95■□□□□ 0.46
CLCF1-201ENST00000312438 CD302Q8IX05 232 aa17.95■□□□□ 0.46
CLCF1-201ENST00000312438 TAF4BQ92750 862 aa17.95■□□□□ 0.46
CLCF1-201ENST00000312438 SRGAP2O75044 1071 aa17.94■□□□□ 0.46
CLCF1-201ENST00000312438 TRPA1O75762 1119 aa17.94■□□□□ 0.46
CLCF1-201ENST00000312438 CLSTN1O94985 981 aa17.94■□□□□ 0.46
CLCF1-201ENST00000312438 TCP1P17987 556 aaKnown RBP17.94■□□□□ 0.46
CLCF1-201ENST00000312438 GRM5P41594 1212 aa17.94■□□□□ 0.46
CLCF1-201ENST00000312438 CRYBB1P53674 252 aaPredicted RBP17.94■□□□□ 0.46
CLCF1-201ENST00000312438 NOTUMQ6P988 496 aa17.94■□□□□ 0.46
CLCF1-201ENST00000312438 SLC27A1Q6PCB7 646 aa17.94■□□□□ 0.46
CLCF1-201ENST00000312438 CALR3Q96L12 384 aaKnown RBP17.94■□□□□ 0.46
CLCF1-201ENST00000312438 PUF60Q9UHX1 559 aaKnown RBP17.94■□□□□ 0.46
CLCF1-201ENST00000312438 PCDHB4Q9Y5E5 795 aa17.94■□□□□ 0.46
CLCF1-201ENST00000312438 CTAGE15A4D2H0 777 aa17.93■□□□□ 0.46
CLCF1-201ENST00000312438 GRID2IPA4D2P6 1211 aa17.93■□□□□ 0.46
CLCF1-201ENST00000312438 CTAGE8P0CG41 777 aa17.93■□□□□ 0.46
CLCF1-201ENST00000312438 ABCB4P21439 1286 aa17.93■□□□□ 0.46
CLCF1-201ENST00000312438 MAP2K2P36507 400 aa17.93■□□□□ 0.46
CLCF1-201ENST00000312438 CAP1Q01518 475 aa17.93■□□□□ 0.46
CLCF1-201ENST00000312438 SCARA3Q6AZY7 606 aa17.93■□□□□ 0.46
CLCF1-201ENST00000312438 JADE1Q6IE81 842 aa17.93■□□□□ 0.46
CLCF1-201ENST00000312438 CXCL17Q6UXB2 119 aa17.93■□□□□ 0.46
CLCF1-201ENST00000312438 RSRC2Q7L4I2 434 aaKnown RBP17.93■□□□□ 0.46
CLCF1-201ENST00000312438 CTAGE6Q86UF2 777 aa17.93■□□□□ 0.46
CLCF1-201ENST00000312438 NT5DC4Q86YG4 428 aa17.93■□□□□ 0.46
CLCF1-201ENST00000312438 CTAGE4Q8IX94 777 aa17.93■□□□□ 0.46
CLCF1-201ENST00000312438 TPCN2Q8NHX9 752 aa17.93■□□□□ 0.46
CLCF1-201ENST00000312438 SLC35G2Q8TBE7 412 aa17.93■□□□□ 0.46
CLCF1-201ENST00000312438 RFFLQ8WZ73 363 aa17.93■□□□□ 0.46
CLCF1-201ENST00000312438 ANKRD7Q92527 254 aa17.93■□□□□ 0.46
CLCF1-201ENST00000312438 GOLGA1Q92805 767 aa17.93■□□□□ 0.46
CLCF1-201ENST00000312438 FAXDC2Q96IV6 333 aa17.93■□□□□ 0.46
CLCF1-201ENST00000312438 CCDC94Q9BW85 323 aaPredicted RBP17.93■□□□□ 0.46
CLCF1-201ENST00000312438 TLR10Q9BXR5 811 aa17.93■□□□□ 0.46
CLCF1-201ENST00000312438 THAP2Q9H0W7 228 aa17.93■□□□□ 0.46
CLCF1-201ENST00000312438 PLEKHA5Q9HAU0 1116 aa17.93■□□□□ 0.46
CLCF1-201ENST00000312438 SRRDQ9UH36 339 aa17.93■□□□□ 0.46
CLCF1-201ENST00000312438 HYOU1Q9Y4L1 999 aa17.93■□□□□ 0.46
CLCF1-201ENST00000312438 MROH7Q68CQ1 1323 aa17.93■□□□□ 0.46
CLCF1-201ENST00000312438 MEFVO15553 781 aaPredicted RBP17.93■□□□□ 0.46
CLCF1-201ENST00000312438 NFICP08651 508 aa17.93■□□□□ 0.46
CLCF1-201ENST00000312438 GPC5P78333 572 aa17.93■□□□□ 0.46
CLCF1-201ENST00000312438 CKAP4Q07065 602 aaKnown RBP17.93■□□□□ 0.46
CLCF1-201ENST00000312438 SNX17Q15036 470 aa17.93■□□□□ 0.46
CLCF1-201ENST00000312438 NBPF20Q3BBV1 942 aa17.93■□□□□ 0.46
CLCF1-201ENST00000312438 MEI1Q5TIA1 1274 aa17.93■□□□□ 0.46
CLCF1-201ENST00000312438 TMEM270Q6UE05 265 aa17.93■□□□□ 0.46
CLCF1-201ENST00000312438 RHOT2Q8IXI1 618 aa17.93■□□□□ 0.46
CLCF1-201ENST00000312438 SYCE1Q8N0S2 351 aa17.93■□□□□ 0.46
CLCF1-201ENST00000312438 NIF3L1Q9GZT8 377 aa17.93■□□□□ 0.46
CLCF1-201ENST00000312438 XYLT2Q9H1B5 865 aa17.93■□□□□ 0.46
CLCF1-201ENST00000312438 XPNPEP3Q9NQH7 507 aa17.93■□□□□ 0.46
CLCF1-201ENST00000312438 C2CD2Q9Y426 696 aa17.93■□□□□ 0.46
CLCF1-201ENST00000312438 NCANO14594 1321 aa17.92■□□□□ 0.46
CLCF1-201ENST00000312438 UMODL1Q5DID0 1318 aa17.92■□□□□ 0.46
CLCF1-201ENST00000312438 EVPLQ92817 2033 aa17.92■□□□□ 0.46
CLCF1-201ENST00000312438 ADAMTS4O75173 837 aa17.92■□□□□ 0.46
CLCF1-201ENST00000312438 NPTXRO95502 500 aa17.92■□□□□ 0.46
CLCF1-201ENST00000312438 PRKAR2AP13861 404 aaKnown RBP17.92■□□□□ 0.46
CLCF1-201ENST00000312438 TCEAL1Q15170 157 aa17.92■□□□□ 0.46
CLCF1-201ENST00000312438 ELF2Q15723 593 aa17.92■□□□□ 0.46
CLCF1-201ENST00000312438 ZNF699Q32M78 642 aa17.92■□□□□ 0.46
CLCF1-201ENST00000312438 ACAD10Q6JQN1 1059 aa17.92■□□□□ 0.46
CLCF1-201ENST00000312438 C1orf127Q8N9H9 656 aa17.92■□□□□ 0.46
CLCF1-201ENST00000312438 LRRC57Q8N9N7 239 aa17.92■□□□□ 0.46
CLCF1-201ENST00000312438 OSBPL9Q96SU4 736 aa17.92■□□□□ 0.46
CLCF1-201ENST00000312438 GTF2IRD1Q9UHL9 959 aa17.92■□□□□ 0.46
CLCF1-201ENST00000312438 KRT19P08727 400 aa17.91■□□□□ 0.46
CLCF1-201ENST00000312438 CCND3P30281 292 aaPredicted RBP17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms