RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 ZFYVE16Q7Z3T8 1539 aa16.23■□□□□ 0.19
HCFC1-201ENST00000310441 PHKG2P15735 406 aa16.23■□□□□ 0.19
HCFC1-201ENST00000310441 UBE3AQ05086 875 aa16.23■□□□□ 0.19
HCFC1-201ENST00000310441 KDSRQ06136 332 aa16.23■□□□□ 0.19
HCFC1-201ENST00000310441 NUP93Q8N1F7 819 aa16.23■□□□□ 0.19
HCFC1-201ENST00000310441 COA7Q96BR5 231 aa16.23■□□□□ 0.19
HCFC1-201ENST00000310441 SENP7Q9BQF6 1050 aa16.23■□□□□ 0.19
HCFC1-201ENST00000310441 UNC45AQ9H3U1 944 aa16.23■□□□□ 0.19
HCFC1-201ENST00000310441 ZNF302Q9NR11 478 aa16.23■□□□□ 0.19
HCFC1-201ENST00000310441 ARHGEF38Q9NXL2 777 aa16.23■□□□□ 0.19
HCFC1-201ENST00000310441 LSM7Q9UK45 103 aaKnown RBP16.23■□□□□ 0.19
HCFC1-201ENST00000310441 SPACA6W5XKT8 324 aa16.23■□□□□ 0.19
HCFC1-201ENST00000310441 ARHGEF40Q8TER5 1519 aa16.23■□□□□ 0.19
HCFC1-201ENST00000310441 ARL4DP49703 201 aa16.23■□□□□ 0.19
HCFC1-201ENST00000310441 PADI6Q6TGC4 694 aa16.23■□□□□ 0.19
HCFC1-201ENST00000310441 SCFD2Q8WU76 684 aa16.23■□□□□ 0.19
HCFC1-201ENST00000310441 TMA16Q96EY4 203 aaKnown RBP16.23■□□□□ 0.19
HCFC1-201ENST00000310441 FAM83BQ5T0W9 1011 aa16.23■□□□□ 0.19
HCFC1-201ENST00000310441 DDHD1Q8NEL9 900 aa16.23■□□□□ 0.19
HCFC1-201ENST00000310441 HOXD10P28358 340 aa16.23■□□□□ 0.19
HCFC1-201ENST00000310441 FNTAP49354 379 aa16.23■□□□□ 0.19
HCFC1-201ENST00000310441 KRT17Q04695 432 aa16.23■□□□□ 0.19
HCFC1-201ENST00000310441 C1DQ13901 141 aaKnown RBP16.23■□□□□ 0.19
HCFC1-201ENST00000310441 NDUFA5Q16718 116 aa16.23■□□□□ 0.19
HCFC1-201ENST00000310441 BTBD8Q5XKL5 378 aa16.23■□□□□ 0.19
HCFC1-201ENST00000310441 ERAP1Q9NZ08 941 aa16.23■□□□□ 0.19
HCFC1-201ENST00000310441 EFCAB6Q5THR3 1501 aa16.22■□□□□ 0.19
HCFC1-201ENST00000310441 KCNN4O15554 427 aa16.22■□□□□ 0.19
HCFC1-201ENST00000310441 FTLP02792 175 aaPredicted RBP16.22■□□□□ 0.19
HCFC1-201ENST00000310441 TLK2Q86UE8 772 aa16.22■□□□□ 0.19
HCFC1-201ENST00000310441 SH3GL1Q99961 368 aa16.22■□□□□ 0.19
HCFC1-201ENST00000310441 BBS2Q9BXC9 721 aa16.22■□□□□ 0.19
HCFC1-201ENST00000310441 GREM2Q9H772 168 aa16.22■□□□□ 0.19
HCFC1-201ENST00000310441 SLC24A3Q9HC58 644 aa16.22■□□□□ 0.19
HCFC1-201ENST00000310441 SEC24DO94855 1032 aaPredicted RBP16.22■□□□□ 0.19
HCFC1-201ENST00000310441 EIF3EP60228 445 aaKnown RBP16.22■□□□□ 0.19
HCFC1-201ENST00000310441 LLGL1Q15334 1064 aa16.22■□□□□ 0.19
HCFC1-201ENST00000310441 LZTS1Q9Y250 596 aa16.22■□□□□ 0.19
HCFC1-201ENST00000310441 POLBP06746 335 aa16.22■□□□□ 0.19
HCFC1-201ENST00000310441 NME3Q13232 169 aa16.22■□□□□ 0.19
HCFC1-201ENST00000310441 YAF2Q8IY57 180 aa16.22■□□□□ 0.19
HCFC1-201ENST00000310441 TSEN34Q9BSV6 310 aaKnown RBP16.22■□□□□ 0.19
HCFC1-201ENST00000310441 CARD9Q9H257 536 aa16.22■□□□□ 0.19
HCFC1-201ENST00000310441 AATKQ6ZMQ8 1374 aa16.22■□□□□ 0.19
HCFC1-201ENST00000310441 ITIH2P19823 946 aa16.22■□□□□ 0.19
HCFC1-201ENST00000310441 JAK1P23458 1154 aa16.22■□□□□ 0.19
HCFC1-201ENST00000310441 KCNK10P57789 538 aa16.22■□□□□ 0.19
HCFC1-201ENST00000310441 LRRC74AQ0VAA2 488 aa16.22■□□□□ 0.19
HCFC1-201ENST00000310441 STKLD1Q8NE28 680 aa16.22■□□□□ 0.19
HCFC1-201ENST00000310441 KCNV2Q8TDN2 545 aa16.22■□□□□ 0.19
HCFC1-201ENST00000310441 ZNF341Q9BYN7 854 aa16.22■□□□□ 0.19
HCFC1-201ENST00000310441 DHX35Q9H5Z1 703 aaKnown RBP16.22■□□□□ 0.19
HCFC1-201ENST00000310441 PHF2O75151 1096 aa16.22■□□□□ 0.19
HCFC1-201ENST00000310441 RRM2P31350 389 aa16.22■□□□□ 0.19
HCFC1-201ENST00000310441 SLC9A5Q14940 896 aa16.22■□□□□ 0.19
HCFC1-201ENST00000310441 RTL3Q8N8U3 475 aaKnown RBP16.22■□□□□ 0.19
HCFC1-201ENST00000310441 RNPC3Q96LT9 517 aaKnown RBP16.22■□□□□ 0.19
HCFC1-201ENST00000310441 ZC3H4Q9UPT8 1303 aaKnown RBP16.22■□□□□ 0.19
HCFC1-201ENST00000310441 FKBP9O95302 570 aa16.22■□□□□ 0.19
HCFC1-201ENST00000310441 FCGR1AP12314 374 aa16.22■□□□□ 0.19
HCFC1-201ENST00000310441 RXRGP48443 463 aa16.22■□□□□ 0.19
HCFC1-201ENST00000310441 SFSWAPQ12872 951 aaKnown RBP16.22■□□□□ 0.19
HCFC1-201ENST00000310441 NCAPHQ15003 741 aa16.22■□□□□ 0.19
HCFC1-201ENST00000310441 FKBP9P1Q75LS8 142 aa16.22■□□□□ 0.19
HCFC1-201ENST00000310441 ZNF467Q7Z7K2 595 aaPredicted RBP16.22■□□□□ 0.19
HCFC1-201ENST00000310441 TTC30AQ86WT1 665 aa16.22■□□□□ 0.19
HCFC1-201ENST00000310441 RASGRP4Q8TDF6 673 aa16.22■□□□□ 0.19
HCFC1-201ENST00000310441 ZNF200P98182 395 aaPredicted RBP16.21■□□□□ 0.19
HCFC1-201ENST00000310441 COASYQ13057 564 aa16.21■□□□□ 0.19
HCFC1-201ENST00000310441 STX3Q13277 289 aa16.21■□□□□ 0.19
HCFC1-201ENST00000310441 DCAF4L1Q3SXM0 396 aa16.21■□□□□ 0.19
HCFC1-201ENST00000310441 NSUN6Q8TEA1 469 aaKnown RBP16.21■□□□□ 0.19
HCFC1-201ENST00000310441 NPHS2Q9NP85 383 aa16.21■□□□□ 0.19
HCFC1-201ENST00000310441 ALDH1A2O94788 518 aa16.21■□□□□ 0.19
HCFC1-201ENST00000310441 SPRP35270 261 aaPredicted RBP16.21■□□□□ 0.19
HCFC1-201ENST00000310441 KRT20P35900 424 aa16.21■□□□□ 0.19
HCFC1-201ENST00000310441 C11orf88Q6PI97 169 aa16.21■□□□□ 0.19
HCFC1-201ENST00000310441 GPD1LQ8N335 351 aa16.21■□□□□ 0.19
HCFC1-201ENST00000310441 FBXO2Q9UK22 296 aaPredicted RBP16.21■□□□□ 0.19
HCFC1-201ENST00000310441 STK25O00506 426 aa16.21■□□□□ 0.19
HCFC1-201ENST00000310441 DTNBO60941 627 aa16.21■□□□□ 0.19
HCFC1-201ENST00000310441 APRTP07741 180 aa16.21■□□□□ 0.19
HCFC1-201ENST00000310441 QARSP47897 775 aaKnown RBP16.21■□□□□ 0.19
HCFC1-201ENST00000310441 ST8SIA6P61647 398 aa16.21■□□□□ 0.19
HCFC1-201ENST00000310441 DOK7Q18PE1 504 aa16.21■□□□□ 0.19
HCFC1-201ENST00000310441 GRAMD1CQ8IYS0 662 aa16.21■□□□□ 0.19
HCFC1-201ENST00000310441 CNDP1Q96KN2 507 aa16.21■□□□□ 0.19
HCFC1-201ENST00000310441 ROPN1BQ9BZX4 212 aaPredicted RBP16.21■□□□□ 0.19
HCFC1-201ENST00000310441 ROPN1Q9HAT0 212 aaPredicted RBP16.21■□□□□ 0.19
HCFC1-201ENST00000310441 AFF4Q9UHB7 1163 aaKnown RBP16.21■□□□□ 0.19
HCFC1-201ENST00000310441 SNRPFP62306 86 aaKnown RBP16.21■□□□□ 0.19
HCFC1-201ENST00000310441 CHMP1BQ7LBR1 199 aa16.21■□□□□ 0.19
HCFC1-201ENST00000310441 TRPM8Q7Z2W7 1104 aa16.21■□□□□ 0.19
HCFC1-201ENST00000310441 RBAKQ9NYW8 714 aaPredicted RBP16.21■□□□□ 0.19
HCFC1-201ENST00000310441 ZC3H7BQ9UGR2 993 aaKnown RBP16.21■□□□□ 0.19
HCFC1-201ENST00000310441 BIRC5O15392 142 aa16.21■□□□□ 0.19
HCFC1-201ENST00000310441 TEX28O15482 410 aa16.21■□□□□ 0.19
HCFC1-201ENST00000310441 CYP21A2P08686 494 aa16.21■□□□□ 0.19
HCFC1-201ENST00000310441 TTC33Q6PID6 262 aaPredicted RBP16.21■□□□□ 0.19
HCFC1-201ENST00000310441 DNAJC9Q8WXX5 260 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms