RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 PTGIRP43119 386 aa12.32□□□□□ -0.44
PTPN2-201ENST00000309660 ALDH5A1P51649 535 aaPredicted RBP12.32□□□□□ -0.44
PTPN2-201ENST00000309660 PPP2R2AP63151 447 aa12.32□□□□□ -0.44
PTPN2-201ENST00000309660 TFAMQ00059 246 aaKnown RBP12.32□□□□□ -0.44
PTPN2-201ENST00000309660 CUL2Q13617 745 aa12.32□□□□□ -0.44
PTPN2-201ENST00000309660 NLRP14Q86W24 1093 aa12.32□□□□□ -0.44
PTPN2-201ENST00000309660 THNSL1Q8IYQ7 743 aa12.32□□□□□ -0.44
PTPN2-201ENST00000309660 RBBP8NLQ8NC74 664 aaPredicted RBP12.32□□□□□ -0.44
PTPN2-201ENST00000309660 PRPF31Q8WWY3 499 aaKnown RBP12.32□□□□□ -0.44
PTPN2-201ENST00000309660 RNF25Q96BH1 459 aaPredicted RBP12.32□□□□□ -0.44
PTPN2-201ENST00000309660 NLRP4Q96MN2 994 aa12.32□□□□□ -0.44
PTPN2-201ENST00000309660 MTFR1LQ9H019 292 aa12.32□□□□□ -0.44
PTPN2-201ENST00000309660 TSPYL1Q9H0U9 437 aa12.32□□□□□ -0.44
PTPN2-201ENST00000309660 EPN3Q9H201 632 aa12.32□□□□□ -0.44
PTPN2-201ENST00000309660 PDLIM7Q9NR12 457 aa12.32□□□□□ -0.44
PTPN2-201ENST00000309660 AFG3L2Q9Y4W6 797 aa12.32□□□□□ -0.44
PTPN2-201ENST00000309660 NUB1Q9Y5A7 615 aa12.32□□□□□ -0.44
PTPN2-201ENST00000309660 CSADQ9Y600 493 aa12.32□□□□□ -0.44
PTPN2-201ENST00000309660 PODXLO00592 558 aa12.32□□□□□ -0.44
PTPN2-201ENST00000309660 ECM2O94769 699 aaPredicted RBP12.32□□□□□ -0.44
PTPN2-201ENST00000309660 VNN1O95497 513 aa12.32□□□□□ -0.44
PTPN2-201ENST00000309660 POTEJP0CG39 1038 aa12.32□□□□□ -0.44
PTPN2-201ENST00000309660 GTF2H1P32780 548 aa12.32□□□□□ -0.44
PTPN2-201ENST00000309660 NCOA4Q13772 614 aa12.32□□□□□ -0.44
PTPN2-201ENST00000309660 PSMD6Q15008 389 aa12.32□□□□□ -0.44
PTPN2-201ENST00000309660 CLUL1Q15846 466 aa12.32□□□□□ -0.44
PTPN2-201ENST00000309660 MOB2Q70IA6 237 aa12.32□□□□□ -0.44
PTPN2-201ENST00000309660 PRUNE1Q86TP1 453 aa12.32□□□□□ -0.44
PTPN2-201ENST00000309660 RNF149Q8NC42 400 aa12.32□□□□□ -0.44
PTPN2-201ENST00000309660 ZNF473Q8WTR7 871 aaKnown RBP12.32□□□□□ -0.44
PTPN2-201ENST00000309660 TRAPPC12Q8WVT3 735 aa12.32□□□□□ -0.44
PTPN2-201ENST00000309660 CD101Q93033 1021 aa12.32□□□□□ -0.44
PTPN2-201ENST00000309660 ACSF2Q96CM8 615 aaPredicted RBP12.32□□□□□ -0.44
PTPN2-201ENST00000309660 ELP3Q9H9T3 547 aa12.32□□□□□ -0.44
PTPN2-201ENST00000309660 GPRC5DQ9NZD1 345 aa12.32□□□□□ -0.44
PTPN2-201ENST00000309660 GRHL1Q9NZI5 618 aa12.32□□□□□ -0.44
PTPN2-201ENST00000309660 NFASCO94856 1347 aa12.31□□□□□ -0.44
PTPN2-201ENST00000309660 ADM5C9JUS6 153 aa12.31□□□□□ -0.44
PTPN2-201ENST00000309660 RGS16O15492 202 aaPredicted RBP12.31□□□□□ -0.44
PTPN2-201ENST00000309660 CAPSQ13938 189 aa12.31□□□□□ -0.44
PTPN2-201ENST00000309660 CRELD2Q6UXH1 353 aaPredicted RBP12.31□□□□□ -0.44
PTPN2-201ENST00000309660 ENOSF1Q7L5Y1 443 aa12.31□□□□□ -0.44
PTPN2-201ENST00000309660 TAX1BP1Q86VP1 789 aa12.31□□□□□ -0.44
PTPN2-201ENST00000309660 EPS8L3Q8TE67 593 aaKnown RBP12.31□□□□□ -0.44
PTPN2-201ENST00000309660 MTMR12Q9C0I1 747 aa12.31□□□□□ -0.44
PTPN2-201ENST00000309660 PABPC3Q9H361 631 aaKnown RBP12.31□□□□□ -0.44
PTPN2-201ENST00000309660 KIAA1586Q9HCI6 787 aa12.31□□□□□ -0.44
PTPN2-201ENST00000309660 NRBP2Q9NSY0 501 aa12.31□□□□□ -0.44
PTPN2-201ENST00000309660 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.31□□□□□ -0.44
PTPN2-201ENST00000309660 CD2APQ9Y5K6 639 aa12.31□□□□□ -0.44
PTPN2-201ENST00000309660 MROH7Q68CQ1 1323 aa12.31□□□□□ -0.44
PTPN2-201ENST00000309660 PMM2O15305 246 aa12.31□□□□□ -0.44
PTPN2-201ENST00000309660 PPFIA2O75334 1257 aa12.31□□□□□ -0.44
PTPN2-201ENST00000309660 CSDE1O75534 798 aaKnown RBP12.31□□□□□ -0.44
PTPN2-201ENST00000309660 DDNO94850 711 aaPredicted RBP12.31□□□□□ -0.44
PTPN2-201ENST00000309660 C4BPAP04003 597 aaKnown RBP12.31□□□□□ -0.44
PTPN2-201ENST00000309660 RALAP11233 206 aa12.31□□□□□ -0.44
PTPN2-201ENST00000309660 ATF7P17544 494 aaPredicted RBP12.31□□□□□ -0.44
PTPN2-201ENST00000309660 CTNNA2P26232 953 aa12.31□□□□□ -0.44
PTPN2-201ENST00000309660 NAMPTP43490 491 aa12.31□□□□□ -0.44
PTPN2-201ENST00000309660 IGBP1P78318 339 aa12.31□□□□□ -0.44
PTPN2-201ENST00000309660 LIN9Q5TKA1 542 aa12.31□□□□□ -0.44
PTPN2-201ENST00000309660 GSTA5Q7RTV2 222 aa12.31□□□□□ -0.44
PTPN2-201ENST00000309660 HOOK3Q86VS8 718 aa12.31□□□□□ -0.44
PTPN2-201ENST00000309660 MYCBPAPQ8TBZ2 947 aa12.31□□□□□ -0.44
PTPN2-201ENST00000309660 SEC14L1Q92503 715 aa12.31□□□□□ -0.44
PTPN2-201ENST00000309660 C12orf42Q96LP6 360 aa12.31□□□□□ -0.44
PTPN2-201ENST00000309660 PWWP2AQ96N64 755 aa12.31□□□□□ -0.44
PTPN2-201ENST00000309660 HERPUD2Q9BSE4 406 aa12.31□□□□□ -0.44
PTPN2-201ENST00000309660 KIAA1217Q5T5P2 1943 aa12.31□□□□□ -0.44
PTPN2-201ENST00000309660 MYPNQ86TC9 1320 aa12.31□□□□□ -0.44
PTPN2-201ENST00000309660 INO80B-WBP1J3KQ70 363 aa12.31□□□□□ -0.44
PTPN2-201ENST00000309660 TLR3O15455 904 aaKnown RBP12.31□□□□□ -0.44
PTPN2-201ENST00000309660 CST3P01034 146 aaPredicted RBP12.31□□□□□ -0.44
PTPN2-201ENST00000309660 KRT19P08727 400 aa12.31□□□□□ -0.44
PTPN2-201ENST00000309660 WEE2P0C1S8 567 aa12.31□□□□□ -0.44
PTPN2-201ENST00000309660 ADCY8P40145 1251 aa12.31□□□□□ -0.44
PTPN2-201ENST00000309660 IFNAR2P48551 515 aa12.31□□□□□ -0.44
PTPN2-201ENST00000309660 CORO7P57737 925 aa12.31□□□□□ -0.44
PTPN2-201ENST00000309660 ADCY1Q08828 1119 aa12.31□□□□□ -0.44
PTPN2-201ENST00000309660 IFT88Q13099 833 aa12.31□□□□□ -0.44
PTPN2-201ENST00000309660 DPH6Q7L8W6 267 aa12.31□□□□□ -0.44
PTPN2-201ENST00000309660 RHPN2Q8IUC4 686 aa12.31□□□□□ -0.44
PTPN2-201ENST00000309660 INO80BQ9C086 356 aaPredicted RBP12.31□□□□□ -0.44
PTPN2-201ENST00000309660 DHX33Q9H6R0 707 aaKnown RBP12.31□□□□□ -0.44
PTPN2-201ENST00000309660 NXF1Q9UBU9 619 aaKnown RBP12.31□□□□□ -0.44
PTPN2-201ENST00000309660 ADAMTS5Q9UNA0 930 aa12.31□□□□□ -0.44
PTPN2-201ENST00000309660 FER1L6Q2WGJ9 1857 aa12.3□□□□□ -0.44
PTPN2-201ENST00000309660 GSTTP1A0A1W2PQM5 241 aa12.3□□□□□ -0.44
PTPN2-201ENST00000309660 H0YHG0 523 aa12.3□□□□□ -0.44
PTPN2-201ENST00000309660 UNGP13051 313 aaPredicted RBP12.3□□□□□ -0.44
PTPN2-201ENST00000309660 BPIFB4P59827 614 aa12.3□□□□□ -0.44
PTPN2-201ENST00000309660 IFI35P80217 286 aaPredicted RBP12.3□□□□□ -0.44
PTPN2-201ENST00000309660 ATP13A4Q4VNC1 1196 aa12.3□□□□□ -0.44
PTPN2-201ENST00000309660 SLFN12LQ6IEE8 588 aa12.3□□□□□ -0.44
PTPN2-201ENST00000309660 OTUD6BQ8N6M0 293 aa12.3□□□□□ -0.44
PTPN2-201ENST00000309660 HAUS1Q96CS2 278 aa12.3□□□□□ -0.44
PTPN2-201ENST00000309660 R3HDM2Q9Y2K5 976 aaKnown RBP12.3□□□□□ -0.44
PTPN2-201ENST00000309660 MAFBQ9Y5Q3 323 aaPredicted RBP12.3□□□□□ -0.44
PTPN2-201ENST00000309660 A6NNZ2 444 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms