RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 DLATP10515 647 aaKnown RBP19.36■□□□□ 0.69
SSSCA1-201ENST00000309328 TNNI1P19237 187 aa19.36■□□□□ 0.69
SSSCA1-201ENST00000309328 GTF2H1P32780 548 aa19.36■□□□□ 0.69
SSSCA1-201ENST00000309328 VAMP7P51809 220 aa19.36■□□□□ 0.69
SSSCA1-201ENST00000309328 BFSP1Q12934 665 aa19.36■□□□□ 0.69
SSSCA1-201ENST00000309328 PTPROQ16827 1216 aa19.36■□□□□ 0.69
SSSCA1-201ENST00000309328 PDE12Q6L8Q7 609 aaKnown RBP19.36■□□□□ 0.69
SSSCA1-201ENST00000309328 ENOX1Q8TC92 643 aaKnown RBP19.36■□□□□ 0.69
SSSCA1-201ENST00000309328 ARNTL2Q8WYA1 636 aa19.36■□□□□ 0.69
SSSCA1-201ENST00000309328 CCDC127Q96BQ5 260 aa19.36■□□□□ 0.69
SSSCA1-201ENST00000309328 ZNF560Q96MR9 790 aa19.36■□□□□ 0.69
SSSCA1-201ENST00000309328 DUSP9Q99956 384 aaKnown RBP19.36■□□□□ 0.69
SSSCA1-201ENST00000309328 THAP9Q9H5L6 903 aa19.36■□□□□ 0.69
SSSCA1-201ENST00000309328 DPP3Q9NY33 737 aa19.36■□□□□ 0.69
SSSCA1-201ENST00000309328 LMCD1Q9NZU5 365 aa19.36■□□□□ 0.69
SSSCA1-201ENST00000309328 DNAJB4Q9UDY4 337 aa19.36■□□□□ 0.69
SSSCA1-201ENST00000309328 ADAM28Q9UKQ2 775 aa19.36■□□□□ 0.69
SSSCA1-201ENST00000309328 CHD9Q3L8U1 2897 aa19.36■□□□□ 0.69
SSSCA1-201ENST00000309328 PODXLO00592 558 aa19.35■□□□□ 0.69
SSSCA1-201ENST00000309328 TADA2AO75478 443 aa19.35■□□□□ 0.69
SSSCA1-201ENST00000309328 FGF18O76093 207 aa19.35■□□□□ 0.69
SSSCA1-201ENST00000309328 B3GAT3O94766 335 aa19.35■□□□□ 0.69
SSSCA1-201ENST00000309328 CASP4P49662 377 aa19.35■□□□□ 0.69
SSSCA1-201ENST00000309328 MARSP56192 900 aaKnown RBP19.35■□□□□ 0.69
SSSCA1-201ENST00000309328 STX17P56962 302 aa19.35■□□□□ 0.69
SSSCA1-201ENST00000309328 ZSCAN23Q3MJ62 389 aa19.35■□□□□ 0.69
SSSCA1-201ENST00000309328 DDX53Q86TM3 631 aaKnown RBP19.35■□□□□ 0.69
SSSCA1-201ENST00000309328 EFCAB13Q8IY85 973 aa19.35■□□□□ 0.69
SSSCA1-201ENST00000309328 GPR65Q8IYL9 337 aa19.35■□□□□ 0.69
SSSCA1-201ENST00000309328 LRRC52Q8N7C0 313 aa19.35■□□□□ 0.69
SSSCA1-201ENST00000309328 KLHL23Q8NBE8 558 aa19.35■□□□□ 0.69
SSSCA1-201ENST00000309328 BPIFA3Q9BQP9 254 aa19.35■□□□□ 0.69
SSSCA1-201ENST00000309328 SSX2IPQ9Y2D8 614 aa19.35■□□□□ 0.69
SSSCA1-201ENST00000309328 ARHGEF15O94989 841 aa19.34■□□□□ 0.69
SSSCA1-201ENST00000309328 FXR1P51114 621 aaKnown RBP eCLIP19.34■□□□□ 0.69
SSSCA1-201ENST00000309328 RBP5P82980 135 aa19.34■□□□□ 0.69
SSSCA1-201ENST00000309328 GPM6BQ13491 265 aa19.34■□□□□ 0.69
SSSCA1-201ENST00000309328 CCDC40Q4G0X9 1142 aa19.34■□□□□ 0.69
SSSCA1-201ENST00000309328 C18orf25Q96B23 403 aaPredicted RBP19.34■□□□□ 0.69
SSSCA1-201ENST00000309328 LRCH3Q96II8 777 aa19.34■□□□□ 0.69
SSSCA1-201ENST00000309328 SRRTQ9BXP5 876 aaKnown RBP19.34■□□□□ 0.69
SSSCA1-201ENST00000309328 CXCL16Q9H2A7 254 aa19.34■□□□□ 0.69
SSSCA1-201ENST00000309328 HCSTQ9UBK5 93 aa19.34■□□□□ 0.69
SSSCA1-201ENST00000309328 TUBGCP4Q9UGJ1 667 aa19.34■□□□□ 0.69
SSSCA1-201ENST00000309328 MTUS1Q9ULD2 1270 aa19.34■□□□□ 0.69
SSSCA1-201ENST00000309328 PRG3Q9Y2Y8 225 aaPredicted RBP19.34■□□□□ 0.69
SSSCA1-201ENST00000309328 NUB1Q9Y5A7 615 aa19.34■□□□□ 0.69
SSSCA1-201ENST00000309328 RALGAPA2Q2PPJ7 1873 aa19.34■□□□□ 0.69
SSSCA1-201ENST00000309328 ANO9A1A5B4 782 aa19.33■□□□□ 0.68
SSSCA1-201ENST00000309328 SYCE3A1L190 88 aa19.33■□□□□ 0.68
SSSCA1-201ENST00000309328 B4GALT3O60512 393 aa19.33■□□□□ 0.68
SSSCA1-201ENST00000309328 CLCNKBP51801 687 aa19.33■□□□□ 0.68
SSSCA1-201ENST00000309328 SOX4Q06945 474 aaPredicted RBP19.33■□□□□ 0.68
SSSCA1-201ENST00000309328 SPAG1Q07617 926 aa19.33■□□□□ 0.68
SSSCA1-201ENST00000309328 C9orf57Q5W0N0 161 aa19.33■□□□□ 0.68
SSSCA1-201ENST00000309328 PDXDC1Q6P996 788 aa19.33■□□□□ 0.68
SSSCA1-201ENST00000309328 BORCS6Q96GS4 357 aa19.33■□□□□ 0.68
SSSCA1-201ENST00000309328 ANP32EQ9BTT0 268 aa19.33■□□□□ 0.68
SSSCA1-201ENST00000309328 MTMR12Q9C0I1 747 aa19.33■□□□□ 0.68
SSSCA1-201ENST00000309328 NGRNQ9NPE2 291 aaKnown RBP19.33■□□□□ 0.68
SSSCA1-201ENST00000309328 MAGEC2Q9UBF1 373 aaPredicted RBP19.33■□□□□ 0.68
SSSCA1-201ENST00000309328 CITO14578 2027 aa19.33■□□□□ 0.68
SSSCA1-201ENST00000309328 LRRIQ3A6PVS8 624 aaPredicted RBP19.32■□□□□ 0.68
SSSCA1-201ENST00000309328 PIRO00625 290 aa19.32■□□□□ 0.68
SSSCA1-201ENST00000309328 N4BP1O75113 896 aaKnown RBP19.32■□□□□ 0.68
SSSCA1-201ENST00000309328 ITGB1P05556 798 aa19.32■□□□□ 0.68
SSSCA1-201ENST00000309328 MYL5Q02045 173 aa19.32■□□□□ 0.68
SSSCA1-201ENST00000309328 CREMQ03060 361 aa19.32■□□□□ 0.68
SSSCA1-201ENST00000309328 MYO1EQ12965 1108 aa19.32■□□□□ 0.68
SSSCA1-201ENST00000309328 C1orf127Q8N9H9 656 aa19.32■□□□□ 0.68
SSSCA1-201ENST00000309328 PPP2R3CQ969Q6 453 aa19.32■□□□□ 0.68
SSSCA1-201ENST00000309328 TTYH1Q9H313 450 aaPredicted RBP19.32■□□□□ 0.68
SSSCA1-201ENST00000309328 MARCH5Q9NX47 278 aa19.32■□□□□ 0.68
SSSCA1-201ENST00000309328 CHD7Q9P2D1 2997 aa19.32■□□□□ 0.68
SSSCA1-201ENST00000309328 FSD2A1L4K1 749 aa19.31■□□□□ 0.68
SSSCA1-201ENST00000309328 SMTNL1A8MU46 457 aa19.31■□□□□ 0.68
SSSCA1-201ENST00000309328 TULP1O00294 542 aaPredicted RBP19.31■□□□□ 0.68
SSSCA1-201ENST00000309328 SYN3O14994 580 aa19.31■□□□□ 0.68
SSSCA1-201ENST00000309328 KIF4AO95239 1232 aa19.31■□□□□ 0.68
SSSCA1-201ENST00000309328 SOD2P04179 222 aa19.31■□□□□ 0.68
SSSCA1-201ENST00000309328 POU3F3P20264 500 aaPredicted RBP19.31■□□□□ 0.68
SSSCA1-201ENST00000309328 ATICP31939 592 aa19.31■□□□□ 0.68
SSSCA1-201ENST00000309328 TAF6P49848 677 aa19.31■□□□□ 0.68
SSSCA1-201ENST00000309328 WNT7BP56706 349 aa19.31■□□□□ 0.68
SSSCA1-201ENST00000309328 CETN1Q12798 172 aa19.31■□□□□ 0.68
SSSCA1-201ENST00000309328 TRPC3Q13507 836 aa19.31■□□□□ 0.68
SSSCA1-201ENST00000309328 USP41Q3LFD5 358 aa19.31■□□□□ 0.68
SSSCA1-201ENST00000309328 SV2CQ496J9 727 aa19.31■□□□□ 0.68
SSSCA1-201ENST00000309328 ANO6Q4KMQ2 910 aa19.31■□□□□ 0.68
SSSCA1-201ENST00000309328 FUT10Q6P4F1 479 aa19.31■□□□□ 0.68
SSSCA1-201ENST00000309328 TRAPPC11Q7Z392 1133 aa19.31■□□□□ 0.68
SSSCA1-201ENST00000309328 ANKRD20A12PQ8NF67 263 aa19.31■□□□□ 0.68
SSSCA1-201ENST00000309328 SPPL3Q8TCT6 385 aa19.31■□□□□ 0.68
SSSCA1-201ENST00000309328 GAS2L1Q99501 681 aaPredicted RBP19.31■□□□□ 0.68
SSSCA1-201ENST00000309328 FUCA2Q9BTY2 467 aa19.31■□□□□ 0.68
SSSCA1-201ENST00000309328 DNAJC25Q9H1X3 360 aa19.31■□□□□ 0.68
SSSCA1-201ENST00000309328 GOLGA2P5Q9HBQ8 144 aa19.31■□□□□ 0.68
SSSCA1-201ENST00000309328 TMEM8AQ9HCN3 771 aa19.31■□□□□ 0.68
SSSCA1-201ENST00000309328 TLR9Q9NR96 1032 aa19.31■□□□□ 0.68
SSSCA1-201ENST00000309328 NFE2L3Q9Y4A8 694 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms