RNA–Protein interactions for RNA: ENST00000308259.9

MSRB3-201, Transcript of methionine sulfoxide reductase B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRB3, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-201ENST00000308259 TMEM119Q4V9L6 283 aa11.08□□□□□ -0.63
MSRB3-201ENST00000308259 LIN52Q52LA3 116 aa11.08□□□□□ -0.63
MSRB3-201ENST00000308259 GJC2Q5T442 439 aaPredicted RBP11.08□□□□□ -0.63
MSRB3-201ENST00000308259 PATL1Q86TB9 770 aaKnown RBP11.08□□□□□ -0.63
MSRB3-201ENST00000308259 NDE1Q9NXR1 346 aa11.08□□□□□ -0.63
MSRB3-201ENST00000308259 SLC12A4Q9UP95 1085 aa11.08□□□□□ -0.63
MSRB3-201ENST00000308259 TMEM247A6NEH6 219 aa11.08□□□□□ -0.64
MSRB3-201ENST00000308259 XPOTO43592 962 aaKnown RBP11.08□□□□□ -0.64
MSRB3-201ENST00000308259 SNX3O60493 162 aa11.08□□□□□ -0.64
MSRB3-201ENST00000308259 ACSL3O95573 720 aa11.08□□□□□ -0.64
MSRB3-201ENST00000308259 PSMC1P62191 440 aaKnown RBP11.08□□□□□ -0.64
MSRB3-201ENST00000308259 CALCOCO2Q13137 446 aa11.08□□□□□ -0.64
MSRB3-201ENST00000308259 CYTH1Q15438 398 aa11.08□□□□□ -0.64
MSRB3-201ENST00000308259 ZFYVE27Q5T4F4 411 aa11.08□□□□□ -0.64
MSRB3-201ENST00000308259 C6orf118Q5T5N4 469 aa11.08□□□□□ -0.64
MSRB3-201ENST00000308259 ZNF571Q7Z3V5 609 aaPredicted RBP11.08□□□□□ -0.64
MSRB3-201ENST00000308259 CYP2W1Q8TAV3 490 aa11.08□□□□□ -0.64
MSRB3-201ENST00000308259 ZNF408Q9H9D4 720 aa11.08□□□□□ -0.64
MSRB3-201ENST00000308259 SUN2Q9UH99 717 aa11.08□□□□□ -0.64
MSRB3-201ENST00000308259 DCTN4Q9UJW0 460 aa11.08□□□□□ -0.64
MSRB3-201ENST00000308259 PCDHB13Q9Y5F0 798 aa11.08□□□□□ -0.64
MSRB3-201ENST00000308259 CFAP69A5D8W1 941 aa11.08□□□□□ -0.64
MSRB3-201ENST00000308259 MCF2LO15068 1137 aa11.08□□□□□ -0.64
MSRB3-201ENST00000308259 ITGA4P13612 1032 aa11.08□□□□□ -0.64
MSRB3-201ENST00000308259 HOXA13P31271 388 aaPredicted RBP11.08□□□□□ -0.64
MSRB3-201ENST00000308259 SERPINB6P35237 376 aa11.08□□□□□ -0.64
MSRB3-201ENST00000308259 PPIDQ08752 370 aaKnown RBP11.08□□□□□ -0.64
MSRB3-201ENST00000308259 ACAP1Q15027 740 aa11.08□□□□□ -0.64
MSRB3-201ENST00000308259 LRRC74BQ6ZQY2 392 aa11.08□□□□□ -0.64
MSRB3-201ENST00000308259 SPATA16Q9BXB7 569 aa11.08□□□□□ -0.64
MSRB3-201ENST00000308259 PNMA6FA0A0J9YX94 578 aa11.08□□□□□ -0.64
MSRB3-201ENST00000308259 HSPA9P38646 679 aaKnown RBP11.08□□□□□ -0.64
MSRB3-201ENST00000308259 MRPS9P82933 396 aaKnown RBP11.08□□□□□ -0.64
MSRB3-201ENST00000308259 ZNF543Q08ER8 600 aa11.08□□□□□ -0.64
MSRB3-201ENST00000308259 NAB2Q15742 525 aa11.08□□□□□ -0.64
MSRB3-201ENST00000308259 ZNF394Q53GI3 561 aa11.08□□□□□ -0.64
MSRB3-201ENST00000308259 ARSHQ5FYA8 562 aa11.08□□□□□ -0.64
MSRB3-201ENST00000308259 SFR1Q86XK3 245 aa11.08□□□□□ -0.64
MSRB3-201ENST00000308259 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.08□□□□□ -0.64
MSRB3-201ENST00000308259 TBC1D16Q8TBP0 767 aa11.08□□□□□ -0.64
MSRB3-201ENST00000308259 P2RX7Q99572 595 aaKnown RBP11.08□□□□□ -0.64
MSRB3-201ENST00000308259 COQ7Q99807 217 aa11.08□□□□□ -0.64
MSRB3-201ENST00000308259 CCT7Q99832 543 aa11.08□□□□□ -0.64
MSRB3-201ENST00000308259 SYNCQ9H7C4 482 aa11.08□□□□□ -0.64
MSRB3-201ENST00000308259 KCNQ5Q9NR82 932 aa11.08□□□□□ -0.64
MSRB3-201ENST00000308259 ZFP69BQ9UJL9 534 aa11.08□□□□□ -0.64
MSRB3-201ENST00000308259 PCDHA1Q9Y5I3 950 aa11.08□□□□□ -0.64
MSRB3-201ENST00000308259 COL16A1Q07092 1604 aaPredicted RBP11.07□□□□□ -0.64
MSRB3-201ENST00000308259 PGRMC1O00264 195 aaKnown RBP11.07□□□□□ -0.64
MSRB3-201ENST00000308259 ZBTB39O15060 712 aa11.07□□□□□ -0.64
MSRB3-201ENST00000308259 RPS12P25398 132 aaKnown RBP11.07□□□□□ -0.64
MSRB3-201ENST00000308259 FLT3P36888 993 aa11.07□□□□□ -0.64
MSRB3-201ENST00000308259 CETN2P41208 172 aa11.07□□□□□ -0.64
MSRB3-201ENST00000308259 IFI35P80217 286 aaPredicted RBP11.07□□□□□ -0.64
MSRB3-201ENST00000308259 SLC18A3Q16572 532 aa11.07□□□□□ -0.64
MSRB3-201ENST00000308259 CROCCP2Q86T23 111 aa11.07□□□□□ -0.64
MSRB3-201ENST00000308259 PEX5LQ8IYB4 626 aa11.07□□□□□ -0.64
MSRB3-201ENST00000308259 PTPRN2Q92932 1015 aa11.07□□□□□ -0.64
MSRB3-201ENST00000308259 CELF4Q9BZC1 486 aaKnown RBP11.07□□□□□ -0.64
MSRB3-201ENST00000308259 RXFP1Q9HBX9 757 aa11.07□□□□□ -0.64
MSRB3-201ENST00000308259 LRRC4CQ9HCJ2 640 aa11.07□□□□□ -0.64
MSRB3-201ENST00000308259 RIC8AQ9NPQ8 531 aa11.07□□□□□ -0.64
MSRB3-201ENST00000308259 SELENONQ9NZV5 590 aa11.07□□□□□ -0.64
MSRB3-201ENST00000308259 CHORDC1Q9UHD1 332 aaPredicted RBP11.07□□□□□ -0.64
MSRB3-201ENST00000308259 SLC12A6Q9UHW9 1150 aa11.07□□□□□ -0.64
MSRB3-201ENST00000308259 ITGB1BP2Q9UKP3 347 aa11.07□□□□□ -0.64
MSRB3-201ENST00000308259 LAMB1P07942 1786 aa11.07□□□□□ -0.64
MSRB3-201ENST00000308259 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.07□□□□□ -0.64
MSRB3-201ENST00000308259 POLRMTO00411 1230 aaKnown RBP11.07□□□□□ -0.64
MSRB3-201ENST00000308259 CHMP2AO43633 222 aa11.07□□□□□ -0.64
MSRB3-201ENST00000308259 TPBGLP0DKB5 382 aa11.07□□□□□ -0.64
MSRB3-201ENST00000308259 RTP1P59025 263 aa11.07□□□□□ -0.64
MSRB3-201ENST00000308259 UBXN2AP68543 259 aa11.07□□□□□ -0.64
MSRB3-201ENST00000308259 THOC5Q13769 683 aaKnown RBP11.07□□□□□ -0.64
MSRB3-201ENST00000308259 PLS1Q14651 629 aa11.07□□□□□ -0.64
MSRB3-201ENST00000308259 MARK2Q7KZI7 788 aaKnown RBP11.07□□□□□ -0.64
MSRB3-201ENST00000308259 CD302Q8IX05 232 aa11.07□□□□□ -0.64
MSRB3-201ENST00000308259 COL22A1Q8NFW1 1626 aaPredicted RBP11.07□□□□□ -0.64
MSRB3-201ENST00000308259 TTI1O43156 1089 aa11.07□□□□□ -0.64
MSRB3-201ENST00000308259 PJA2O43164 708 aa11.07□□□□□ -0.64
MSRB3-201ENST00000308259 NOL3O60936 208 aaKnown RBP11.07□□□□□ -0.64
MSRB3-201ENST00000308259 CBX6O95503 412 aa11.07□□□□□ -0.64
MSRB3-201ENST00000308259 TTLL1O95922 423 aa11.07□□□□□ -0.64
MSRB3-201ENST00000308259 ABCB4P21439 1286 aa11.07□□□□□ -0.64
MSRB3-201ENST00000308259 NAA20P61599 178 aa11.07□□□□□ -0.64
MSRB3-201ENST00000308259 MKRN4PQ13434 485 aaPredicted RBP11.07□□□□□ -0.64
MSRB3-201ENST00000308259 LLGL1Q15334 1064 aa11.07□□□□□ -0.64
MSRB3-201ENST00000308259 TMEM259Q4ZIN3 620 aa11.07□□□□□ -0.64
MSRB3-201ENST00000308259 STRIP1Q5VSL9 837 aa11.07□□□□□ -0.64
MSRB3-201ENST00000308259 TRIM59Q8IWR1 403 aa11.07□□□□□ -0.64
MSRB3-201ENST00000308259 CAMKK2Q96RR4 588 aa11.07□□□□□ -0.64
MSRB3-201ENST00000308259 CCDC77Q9BR77 488 aa11.07□□□□□ -0.64
MSRB3-201ENST00000308259 ARHGAP10A1A4S6 786 aa11.06□□□□□ -0.64
MSRB3-201ENST00000308259 KRT36O76013 467 aa11.06□□□□□ -0.64
MSRB3-201ENST00000308259 NAT2P11245 290 aa11.06□□□□□ -0.64
MSRB3-201ENST00000308259 ESRRAP11474 423 aaPredicted RBP11.06□□□□□ -0.64
MSRB3-201ENST00000308259 BRAFP15056 766 aa11.06□□□□□ -0.64
MSRB3-201ENST00000308259 ERVK-9P63128 1117 aa11.06□□□□□ -0.64
MSRB3-201ENST00000308259 IL9RQ01113 521 aa11.06□□□□□ -0.64
MSRB3-201ENST00000308259 QRICH1Q2TAL8 776 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms