RNA–Protein interactions for RNA: ENST00000307180.4

TSNARE1-201, Transcript of t-SNARE domain containing 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TSNARE1, Length 1,907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSNARE1-201ENST00000307180 NLRP7Q8WX94 980 aa17.07■□□□□ 0.32
TSNARE1-201ENST00000307180 PSPC1Q8WXF1 523 aaKnown RBP17.07■□□□□ 0.32
TSNARE1-201ENST00000307180 NLRP4Q96MN2 994 aa17.07■□□□□ 0.32
TSNARE1-201ENST00000307180 GDF15Q99988 308 aa17.07■□□□□ 0.32
TSNARE1-201ENST00000307180 UBE2OQ9C0C9 1292 aaKnown RBP17.07■□□□□ 0.32
TSNARE1-201ENST00000307180 INTS2Q9H0H0 1204 aaKnown RBP17.07■□□□□ 0.32
TSNARE1-201ENST00000307180 ST6GALNAC4Q9H4F1 302 aa17.07■□□□□ 0.32
TSNARE1-201ENST00000307180 PCIF1Q9H4Z3 704 aa17.07■□□□□ 0.32
TSNARE1-201ENST00000307180 CALCOCO1Q9P1Z2 691 aa17.07■□□□□ 0.32
TSNARE1-201ENST00000307180 DNAJC12Q9UKB3 198 aa17.07■□□□□ 0.32
TSNARE1-201ENST00000307180 CSDE1O75534 798 aaKnown RBP17.06■□□□□ 0.32
TSNARE1-201ENST00000307180 GFPT2O94808 682 aa17.06■□□□□ 0.32
TSNARE1-201ENST00000307180 SRGAP2CP0DJJ0 459 aa17.06■□□□□ 0.32
TSNARE1-201ENST00000307180 KRT13P13646 458 aa17.06■□□□□ 0.32
TSNARE1-201ENST00000307180 SOX5P35711 763 aa17.06■□□□□ 0.32
TSNARE1-201ENST00000307180 GPC3P51654 580 aa17.06■□□□□ 0.32
TSNARE1-201ENST00000307180 GTF2BQ00403 316 aa17.06■□□□□ 0.32
TSNARE1-201ENST00000307180 MEI1Q5TIA1 1274 aa17.06■□□□□ 0.32
TSNARE1-201ENST00000307180 HAUS6Q7Z4H7 955 aa17.06■□□□□ 0.32
TSNARE1-201ENST00000307180 TMEM40Q8WWA1 233 aa17.06■□□□□ 0.32
TSNARE1-201ENST00000307180 TCP11Q8WWU5 503 aa17.06■□□□□ 0.32
TSNARE1-201ENST00000307180 VWCEQ96DN2 955 aa17.06■□□□□ 0.32
TSNARE1-201ENST00000307180 POLR3FQ9H1D9 316 aaPredicted RBP17.06■□□□□ 0.32
TSNARE1-201ENST00000307180 IL23AQ9NPF7 189 aa17.06■□□□□ 0.32
TSNARE1-201ENST00000307180 SIP14410 1827 aa17.06■□□□□ 0.32
TSNARE1-201ENST00000307180 A0A087WZ62 844 aa17.06■□□□□ 0.32
TSNARE1-201ENST00000307180 FTCDO95954 541 aa17.06■□□□□ 0.32
TSNARE1-201ENST00000307180 RPLP2P05387 115 aaKnown RBP17.06■□□□□ 0.32
TSNARE1-201ENST00000307180 MYL7Q01449 175 aa17.06■□□□□ 0.32
TSNARE1-201ENST00000307180 DRAP1Q14919 205 aaPredicted RBP17.06■□□□□ 0.32
TSNARE1-201ENST00000307180 C12orf56Q8IXR9 622 aa17.06■□□□□ 0.32
TSNARE1-201ENST00000307180 RPUSD2Q8IZ73 545 aaKnown RBP17.06■□□□□ 0.32
TSNARE1-201ENST00000307180 ASAP3Q8TDY4 903 aa17.06■□□□□ 0.32
TSNARE1-201ENST00000307180 FDXACB1Q9BRP7 624 aaPredicted RBP17.06■□□□□ 0.32
TSNARE1-201ENST00000307180 ADAMTS10Q9H324 1103 aa17.06■□□□□ 0.32
TSNARE1-201ENST00000307180 RNF14Q9UBS8 474 aa17.06■□□□□ 0.32
TSNARE1-201ENST00000307180 NENFQ9UMX5 172 aa17.06■□□□□ 0.32
TSNARE1-201ENST00000307180 GRID2IPA4D2P6 1211 aa17.05■□□□□ 0.32
TSNARE1-201ENST00000307180 TISP43B9A030 160 aa17.05■□□□□ 0.32
TSNARE1-201ENST00000307180 F8VZ95 297 aa17.05■□□□□ 0.32
TSNARE1-201ENST00000307180 POLR3GO15318 223 aaPredicted RBP17.05■□□□□ 0.32
TSNARE1-201ENST00000307180 SLC16A4O15374 487 aa17.05■□□□□ 0.32
TSNARE1-201ENST00000307180 GAS2O43903 313 aaKnown RBP17.05■□□□□ 0.32
TSNARE1-201ENST00000307180 OAS2P29728 719 aaKnown RBP17.05■□□□□ 0.32
TSNARE1-201ENST00000307180 PEX3P56589 373 aa17.05■□□□□ 0.32
TSNARE1-201ENST00000307180 LAMTOR4Q0VGL1 99 aa17.05■□□□□ 0.32
TSNARE1-201ENST00000307180 LPIN1Q14693 890 aa17.05■□□□□ 0.32
TSNARE1-201ENST00000307180 CASP8Q14790 479 aa17.05■□□□□ 0.32
TSNARE1-201ENST00000307180 FBXO47Q5MNV8 452 aa17.05■□□□□ 0.32
TSNARE1-201ENST00000307180 CCNI2Q6ZMN8 369 aaPredicted RBP17.05■□□□□ 0.32
TSNARE1-201ENST00000307180 ZNF365Q70YC5 407 aa17.05■□□□□ 0.32
TSNARE1-201ENST00000307180 INTS8Q75QN2 995 aaKnown RBP17.05■□□□□ 0.32
TSNARE1-201ENST00000307180 OTOP2Q7RTS6 562 aa17.05■□□□□ 0.32
TSNARE1-201ENST00000307180 PLCD3Q8N3E9 789 aa17.05■□□□□ 0.32
TSNARE1-201ENST00000307180 MCPH1Q8NEM0 835 aa17.05■□□□□ 0.32
TSNARE1-201ENST00000307180 TET1Q8NFU7 2136 aa17.05■□□□□ 0.32
TSNARE1-201ENST00000307180 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.05■□□□□ 0.322e-6■■■□□ 17.7
TSNARE1-201ENST00000307180 AGO3Q9H9G7 860 aaKnown RBP17.05■□□□□ 0.32
TSNARE1-201ENST00000307180 DAAM1Q9Y4D1 1078 aa17.05■□□□□ 0.32
TSNARE1-201ENST00000307180 DDX3XO00571 662 aaKnown RBP eCLIP17.04■□□□□ 0.32
TSNARE1-201ENST00000307180 ZMYND10O75800 440 aa17.04■□□□□ 0.32
TSNARE1-201ENST00000307180 H2AFZP0C0S5 128 aa17.04■□□□□ 0.32
TSNARE1-201ENST00000307180 FGFR4P22455 802 aa17.04■□□□□ 0.32
TSNARE1-201ENST00000307180 RFC2P35250 354 aa17.04■□□□□ 0.32
TSNARE1-201ENST00000307180 ARL2P36404 184 aa17.04■□□□□ 0.32
TSNARE1-201ENST00000307180 VAMP7P51809 220 aa17.04■□□□□ 0.32
TSNARE1-201ENST00000307180 CRYBB1P53674 252 aaPredicted RBP17.04■□□□□ 0.32
TSNARE1-201ENST00000307180 SNRPFP62306 86 aaKnown RBP17.04■□□□□ 0.32
TSNARE1-201ENST00000307180 IFI16Q16666 785 aaKnown RBP17.04■□□□□ 0.32
TSNARE1-201ENST00000307180 TCTN1Q2MV58 587 aa17.04■□□□□ 0.32
TSNARE1-201ENST00000307180 MAP9Q49MG5 647 aa17.04■□□□□ 0.32
TSNARE1-201ENST00000307180 CFAP221Q4G0U5 840 aa17.04■□□□□ 0.32
TSNARE1-201ENST00000307180 C9orf50Q5SZB4 431 aa17.04■□□□□ 0.32
TSNARE1-201ENST00000307180 H2AFVQ71UI9 128 aa17.04■□□□□ 0.32
TSNARE1-201ENST00000307180 DBF4BQ8NFT6 615 aa17.04■□□□□ 0.32
TSNARE1-201ENST00000307180 CBWD1Q9BRT8 395 aa17.04■□□□□ 0.32
TSNARE1-201ENST00000307180 LRRC1Q9BTT6 524 aa17.04■□□□□ 0.32
TSNARE1-201ENST00000307180 SMARCAL1Q9NZC9 954 aa17.04■□□□□ 0.32
TSNARE1-201ENST00000307180 EHD2Q9NZN4 543 aa17.04■□□□□ 0.32
TSNARE1-201ENST00000307180 APEX2Q9UBZ4 518 aa17.04■□□□□ 0.32
TSNARE1-201ENST00000307180 RANBP2P49792 3224 aaKnown RBP17.04■□□□□ 0.32
TSNARE1-201ENST00000307180 ATP8B3O60423 1300 aa17.04■□□□□ 0.32
TSNARE1-201ENST00000307180 PARNO95453 639 aaKnown RBP17.04■□□□□ 0.32
TSNARE1-201ENST00000307180 GLRA2P23416 452 aa17.04■□□□□ 0.32
TSNARE1-201ENST00000307180 CD52P31358 61 aa17.04■□□□□ 0.32
TSNARE1-201ENST00000307180 MATR3P43243 847 aaKnown RBP eCLIP17.04■□□□□ 0.329e-8■■■■■ 27.9
TSNARE1-201ENST00000307180 NOP2P46087 812 aaKnown RBP17.04■□□□□ 0.32
TSNARE1-201ENST00000307180 NCKAP1LP55160 1127 aa17.04■□□□□ 0.32
TSNARE1-201ENST00000307180 DLG4P78352 724 aa17.04■□□□□ 0.32
TSNARE1-201ENST00000307180 NFX1Q12986 1120 aaKnown RBP17.04■□□□□ 0.32
TSNARE1-201ENST00000307180 GPS2Q13227 327 aa17.04■□□□□ 0.32
TSNARE1-201ENST00000307180 TMEM240Q5SV17 173 aa17.04■□□□□ 0.32
TSNARE1-201ENST00000307180 XXYLT1Q8NBI6 393 aa17.04■□□□□ 0.32
TSNARE1-201ENST00000307180 RNF149Q8NC42 400 aa17.04■□□□□ 0.32
TSNARE1-201ENST00000307180 SLC17A8Q8NDX2 589 aa17.04■□□□□ 0.32
TSNARE1-201ENST00000307180 SLC30A5Q8TAD4 765 aa17.04■□□□□ 0.32
TSNARE1-201ENST00000307180 LMO3Q8TAP4 145 aa17.04■□□□□ 0.32
TSNARE1-201ENST00000307180 MS4A14Q96JA4 679 aa17.04■□□□□ 0.32
TSNARE1-201ENST00000307180 HSPBP1Q9NZL4 362 aa17.04■□□□□ 0.32
TSNARE1-201ENST00000307180 INTUQ9ULD6 942 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms