RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 SERPINC1P01008 464 aa29.32■■■□□ 2.28
HDAC3-201ENST00000305264 TNNC2P02585 160 aa29.32■■■□□ 2.28
HDAC3-201ENST00000305264 C4BPAP04003 597 aaKnown RBP29.32■■■□□ 2.28
HDAC3-201ENST00000305264 GTF2H1P32780 548 aa29.32■■■□□ 2.28
HDAC3-201ENST00000305264 ZACNQ401N2 412 aa29.32■■■□□ 2.28
HDAC3-201ENST00000305264 FAM109BQ6ICB4 259 aaPredicted RBP29.32■■■□□ 2.28
HDAC3-201ENST00000305264 TRAPPC11Q7Z392 1133 aa29.32■■■□□ 2.28
HDAC3-201ENST00000305264 CACTINQ8WUQ7 758 aaKnown RBP29.32■■■□□ 2.28
HDAC3-201ENST00000305264 MRPL9Q9BYD2 267 aaKnown RBP29.32■■■□□ 2.28
HDAC3-201ENST00000305264 SLC38A7Q9NVC3 462 aa29.32■■■□□ 2.28
HDAC3-201ENST00000305264 KANSL3Q9P2N6 904 aa29.32■■■□□ 2.28
HDAC3-201ENST00000305264 GBF1Q92538 1859 aa29.32■■■□□ 2.28
HDAC3-201ENST00000305264 DDHD2O94830 711 aa29.32■■■□□ 2.28
HDAC3-201ENST00000305264 HTRA4P83105 476 aaPredicted RBP29.32■■■□□ 2.28
HDAC3-201ENST00000305264 RNASELQ05823 741 aaKnown RBP29.32■■■□□ 2.28
HDAC3-201ENST00000305264 BIRC3Q13489 604 aa29.32■■■□□ 2.28
HDAC3-201ENST00000305264 LRRC43Q8N309 656 aa29.32■■■□□ 2.28
HDAC3-201ENST00000305264 BEST2Q8NFU1 509 aa29.32■■■□□ 2.28
HDAC3-201ENST00000305264 ZBED2Q9BTP6 218 aa29.32■■■□□ 2.28
HDAC3-201ENST00000305264 DPP3Q9NY33 737 aa29.32■■■□□ 2.28
HDAC3-201ENST00000305264 AP3M2P53677 418 aa29.31■■■□□ 2.28
HDAC3-201ENST00000305264 KRT39Q6A163 491 aa29.31■■■□□ 2.28
HDAC3-201ENST00000305264 NAP1L5Q96NT1 182 aaPredicted RBP29.31■■■□□ 2.28
HDAC3-201ENST00000305264 SIX4Q9UIU6 781 aa29.31■■■□□ 2.28
HDAC3-201ENST00000305264 CASTOR2A6NHX0 329 aa29.3■■■□□ 2.28
HDAC3-201ENST00000305264 XPOTO43592 962 aaKnown RBP29.3■■■□□ 2.28
HDAC3-201ENST00000305264 MYL7Q01449 175 aa29.3■■■□□ 2.28
HDAC3-201ENST00000305264 DSC1Q08554 894 aa29.3■■■□□ 2.28
HDAC3-201ENST00000305264 CXorf38Q8TB03 319 aa29.3■■■□□ 2.28
HDAC3-201ENST00000305264 RSPH1Q8WYR4 309 aa29.3■■■□□ 2.28
HDAC3-201ENST00000305264 LGALS16A8MUM7 142 aa29.3■■■□□ 2.28
HDAC3-201ENST00000305264 AP5Z1O43299 807 aa29.3■■■□□ 2.28
HDAC3-201ENST00000305264 ITGB3P05106 788 aa29.3■■■□□ 2.28
HDAC3-201ENST00000305264 TPM2P07951 284 aa29.3■■■□□ 2.28
HDAC3-201ENST00000305264 CYP3A5P20815 502 aa29.3■■■□□ 2.28
HDAC3-201ENST00000305264 BMP8BP34820 402 aa29.3■■■□□ 2.28
HDAC3-201ENST00000305264 TUSC3Q13454 348 aa29.3■■■□□ 2.28
HDAC3-201ENST00000305264 TAS1R2Q8TE23 839 aa29.3■■■□□ 2.28
HDAC3-201ENST00000305264 PAAF1Q9BRP4 392 aa29.3■■■□□ 2.28
HDAC3-201ENST00000305264 DNAJB4Q9UDY4 337 aa29.3■■■□□ 2.28
HDAC3-201ENST00000305264 KIAA1671Q9BY89 1806 aa29.29■■■□□ 2.28
HDAC3-201ENST00000305264 SCN1AP35498 2009 aa29.29■■■□□ 2.28
HDAC3-201ENST00000305264 GRXCR1A8MXD5 290 aa29.29■■■□□ 2.28
HDAC3-201ENST00000305264 VNN1O95497 513 aa29.29■■■□□ 2.28
HDAC3-201ENST00000305264 PLCB2Q00722 1185 aa29.29■■■□□ 2.28
HDAC3-201ENST00000305264 BTG3Q14201 252 aaPredicted RBP29.29■■■□□ 2.28
HDAC3-201ENST00000305264 CMTR2Q8IYT2 770 aaKnown RBP29.29■■■□□ 2.28
HDAC3-201ENST00000305264 RABGGTAQ92696 567 aa29.29■■■□□ 2.28
HDAC3-201ENST00000305264 NRDE2Q9H7Z3 1164 aa29.29■■■□□ 2.28
HDAC3-201ENST00000305264 IFNKQ9P0W0 207 aa29.29■■■□□ 2.28
HDAC3-201ENST00000305264 A0A1B0GTH6 734 aa29.28■■■□□ 2.28
HDAC3-201ENST00000305264 FSD2A1L4K1 749 aa29.28■■■□□ 2.28
HDAC3-201ENST00000305264 PPEF2O14830 753 aa29.28■■■□□ 2.28
HDAC3-201ENST00000305264 RABGGTBP53611 331 aa29.28■■■□□ 2.28
HDAC3-201ENST00000305264 COLGALT2Q8IYK4 626 aa29.28■■■□□ 2.28
HDAC3-201ENST00000305264 ITGA11Q9UKX5 1188 aa29.28■■■□□ 2.28
HDAC3-201ENST00000305264 TLL1O43897 1013 aa29.28■■■□□ 2.28
HDAC3-201ENST00000305264 N4BP1O75113 896 aaKnown RBP29.28■■■□□ 2.28
HDAC3-201ENST00000305264 LRRN2O75325 713 aa29.28■■■□□ 2.28
HDAC3-201ENST00000305264 POLR2BP30876 1174 aaKnown RBP29.28■■■□□ 2.28
HDAC3-201ENST00000305264 INSL6Q9Y581 213 aa29.28■■■□□ 2.28
HDAC3-201ENST00000305264 ZC3H11AO75152 810 aaKnown RBP eCLIP29.27■■■□□ 2.284e-10■■■■□ 22.8
HDAC3-201ENST00000305264 PHACTR2O75167 634 aa29.27■■■□□ 2.28
HDAC3-201ENST00000305264 CST3P01034 146 aaPredicted RBP29.27■■■□□ 2.28
HDAC3-201ENST00000305264 KRT19P08727 400 aa29.27■■■□□ 2.28
HDAC3-201ENST00000305264 LRPAP1P30533 357 aa29.27■■■□□ 2.28
HDAC3-201ENST00000305264 CLCNKBP51801 687 aa29.27■■■□□ 2.28
HDAC3-201ENST00000305264 UVSSAQ2YD98 709 aa29.27■■■□□ 2.28
HDAC3-201ENST00000305264 CHRDL2Q6WN34 429 aa29.27■■■□□ 2.28
HDAC3-201ENST00000305264 FAM193BQ96PV7 902 aaPredicted RBP29.27■■■□□ 2.28
HDAC3-201ENST00000305264 RAD9AQ99638 391 aa29.27■■■□□ 2.28
HDAC3-201ENST00000305264 CWH43Q9H720 699 aa29.27■■■□□ 2.28
HDAC3-201ENST00000305264 RTN4Q9NQC3 1192 aaKnown RBP29.27■■■□□ 2.28
HDAC3-201ENST00000305264 MRPL42Q9Y6G3 142 aaKnown RBP29.27■■■□□ 2.28
HDAC3-201ENST00000305264 GOLGA6L3A6NEY3 463 aa29.26■■■□□ 2.28
HDAC3-201ENST00000305264 TEX33O43247 280 aa29.26■■■□□ 2.28
HDAC3-201ENST00000305264 HLA-DRAP01903 254 aa29.26■■■□□ 2.28
HDAC3-201ENST00000305264 PIK3CAP42336 1068 aa29.26■■■□□ 2.28
HDAC3-201ENST00000305264 UBASH3AP57075 661 aa29.26■■■□□ 2.28
HDAC3-201ENST00000305264 C9orf57Q5W0N0 161 aa29.26■■■□□ 2.28
HDAC3-201ENST00000305264 SEMA4DQ92854 862 aa29.26■■■□□ 2.28
HDAC3-201ENST00000305264 CRACR2AQ9BSW2 395 aa29.26■■■□□ 2.28
HDAC3-201ENST00000305264 ANO9A1A5B4 782 aa29.26■■■□□ 2.27
HDAC3-201ENST00000305264 LCHNA4D1U4 455 aa29.26■■■□□ 2.27
HDAC3-201ENST00000305264 PMM2O15305 246 aa29.26■■■□□ 2.27
HDAC3-201ENST00000305264 IGFBP6P24592 240 aaPredicted RBP29.26■■■□□ 2.27
HDAC3-201ENST00000305264 NCOA4Q13772 614 aa29.26■■■□□ 2.27
HDAC3-201ENST00000305264 PTPN21Q16825 1174 aa29.26■■■□□ 2.27
HDAC3-201ENST00000305264 EPC2Q52LR7 807 aa29.26■■■□□ 2.27
HDAC3-201ENST00000305264 FBXL13Q8NEE6 735 aa29.26■■■□□ 2.27
HDAC3-201ENST00000305264 ELMO3Q96BJ8 720 aa29.26■■■□□ 2.27
HDAC3-201ENST00000305264 PRO3102Q9H379 93 aa29.26■■■□□ 2.27
HDAC3-201ENST00000305264 AGAP1Q9UPQ3 857 aa29.26■■■□□ 2.27
HDAC3-201ENST00000305264 COQ4Q9Y3A0 265 aa29.26■■■□□ 2.27
HDAC3-201ENST00000305264 PBX3P40426 434 aa29.25■■■□□ 2.27
HDAC3-201ENST00000305264 UBXN1Q04323 297 aa29.25■■■□□ 2.27
HDAC3-201ENST00000305264 FILIP1LQ4L180 1135 aa29.25■■■□□ 2.27
HDAC3-201ENST00000305264 SARM1Q6SZW1 724 aa29.25■■■□□ 2.27
HDAC3-201ENST00000305264 TDHQ8IZJ6 230 aa29.25■■■□□ 2.27
HDAC3-201ENST00000305264 XPO4Q9C0E2 1151 aaKnown RBP29.25■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms