RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 COMTP21964 271 aa14.67□□□□□ -0.06
PRKCB-201ENST00000303531 HSD17B4P51659 736 aa14.67□□□□□ -0.06
PRKCB-201ENST00000303531 ZNF235Q14590 738 aa14.67□□□□□ -0.06
PRKCB-201ENST00000303531 NOA1Q8NC60 698 aaKnown RBP14.67□□□□□ -0.06
PRKCB-201ENST00000303531 ASIC4Q96FT7 647 aa14.67□□□□□ -0.06
PRKCB-201ENST00000303531 ASB14A6NK59 587 aa14.67□□□□□ -0.06
PRKCB-201ENST00000303531 CACNB2Q08289 660 aaPredicted RBP14.67□□□□□ -0.06
PRKCB-201ENST00000303531 RMDN1Q96DB5 314 aa14.67□□□□□ -0.06
PRKCB-201ENST00000303531 WDR35Q9P2L0 1181 aa14.67□□□□□ -0.06
PRKCB-201ENST00000303531 PRR12Q9ULL5 1215 aa14.67□□□□□ -0.06
PRKCB-201ENST00000303531 ADGRB3O60242 1522 aa14.67□□□□□ -0.06
PRKCB-201ENST00000303531 CARSP49589 748 aaKnown RBP14.67□□□□□ -0.06
PRKCB-201ENST00000303531 RABGAP1LQ5R372 815 aa14.67□□□□□ -0.06
PRKCB-201ENST00000303531 XPO6Q96QU8 1125 aaKnown RBP14.67□□□□□ -0.06
PRKCB-201ENST00000303531 HPS5Q9UPZ3 1129 aa14.67□□□□□ -0.06
PRKCB-201ENST00000303531 SNX9Q9Y5X1 595 aa14.67□□□□□ -0.06
PRKCB-201ENST00000303531 KCNA2P16389 499 aa14.67□□□□□ -0.06
PRKCB-201ENST00000303531 MTHFD1LQ6UB35 978 aa14.67□□□□□ -0.06
PRKCB-201ENST00000303531 ARHGEF26Q96DR7 871 aa14.67□□□□□ -0.06
PRKCB-201ENST00000303531 ZBED2Q9BTP6 218 aa14.67□□□□□ -0.06
PRKCB-201ENST00000303531 CELF4Q9BZC1 486 aaKnown RBP14.67□□□□□ -0.06
PRKCB-201ENST00000303531 PIGHQ14442 188 aaPredicted RBP14.66□□□□□ -0.06
PRKCB-201ENST00000303531 AGBL2Q5U5Z8 902 aa14.66□□□□□ -0.06
PRKCB-201ENST00000303531 PLA2G4FQ68DD2 849 aa14.66□□□□□ -0.06
PRKCB-201ENST00000303531 CDC42EP5Q6NZY7 148 aa14.66□□□□□ -0.06
PRKCB-201ENST00000303531 KCNV1Q6PIU1 500 aa14.66□□□□□ -0.06
PRKCB-201ENST00000303531 ZIM3Q96PE6 472 aa14.66□□□□□ -0.06
PRKCB-201ENST00000303531 TFR2Q9UP52 801 aa14.66□□□□□ -0.06
PRKCB-201ENST00000303531 PIN4Q9Y237 131 aaKnown RBP14.66□□□□□ -0.06
PRKCB-201ENST00000303531 HNRNPCL2B2RXH8 293 aa14.66□□□□□ -0.06
PRKCB-201ENST00000303531 NEMP1O14524 444 aa14.66□□□□□ -0.06
PRKCB-201ENST00000303531 HNRNPCL1O60812 293 aaKnown RBP14.66□□□□□ -0.06
PRKCB-201ENST00000303531 ELMOD1Q8N336 334 aa14.66□□□□□ -0.06
PRKCB-201ENST00000303531 PPHLN1Q8NEY8 458 aaKnown RBP14.66□□□□□ -0.06
PRKCB-201ENST00000303531 TRIM62Q9BVG3 475 aa14.66□□□□□ -0.06
PRKCB-201ENST00000303531 UNC45AQ9H3U1 944 aa14.66□□□□□ -0.06
PRKCB-201ENST00000303531 TMEM253P0C7T8 217 aa14.66□□□□□ -0.06
PRKCB-201ENST00000303531 SGSM1Q2NKQ1 1148 aa14.66□□□□□ -0.06
PRKCB-201ENST00000303531 STRIP1Q5VSL9 837 aa14.66□□□□□ -0.06
PRKCB-201ENST00000303531 FBXW10Q5XX13 1052 aa14.66□□□□□ -0.06
PRKCB-201ENST00000303531 DDX42Q86XP3 938 aaKnown RBP eCLIP14.66□□□□□ -0.06
PRKCB-201ENST00000303531 USP38Q8NB14 1042 aa14.66□□□□□ -0.06
PRKCB-201ENST00000303531 STX18Q9P2W9 335 aaKnown RBP14.66□□□□□ -0.06
PRKCB-201ENST00000303531 MYO3AQ8NEV4 1616 aa14.66□□□□□ -0.06
PRKCB-201ENST00000303531 FAM47DPA6NHR8 397 aa14.66□□□□□ -0.06
PRKCB-201ENST00000303531 CAMTA2O94983 1202 aa14.66□□□□□ -0.06
PRKCB-201ENST00000303531 ASPSCR1Q9BZE9 553 aa14.66□□□□□ -0.06
PRKCB-201ENST00000303531 CPB1P15086 417 aa14.66□□□□□ -0.06
PRKCB-201ENST00000303531 COPB2P35606 906 aa14.66□□□□□ -0.06
PRKCB-201ENST00000303531 COG2Q14746 738 aa14.66□□□□□ -0.06
PRKCB-201ENST00000303531 DCAF4L1Q3SXM0 396 aa14.66□□□□□ -0.06
PRKCB-201ENST00000303531 EIF3DO15371 548 aaKnown RBP eCLIP14.65□□□□□ -0.06
PRKCB-201ENST00000303531 KLRC1P26715 233 aa14.65□□□□□ -0.06
PRKCB-201ENST00000303531 LSP1P33241 339 aa14.65□□□□□ -0.06
PRKCB-201ENST00000303531 RBP5P82980 135 aa14.65□□□□□ -0.06
PRKCB-201ENST00000303531 ENGASEQ8NFI3 743 aa14.65□□□□□ -0.06
PRKCB-201ENST00000303531 JMJD4Q9H9V9 463 aa14.65□□□□□ -0.06
PRKCB-201ENST00000303531 FXR2P51116 673 aaKnown RBP eCLIP14.65□□□□□ -0.061e-6■■■□□ 16.4
PRKCB-201ENST00000303531 EMC2Q15006 297 aa14.65□□□□□ -0.06
PRKCB-201ENST00000303531 LONP2Q86WA8 852 aa14.65□□□□□ -0.06
PRKCB-201ENST00000303531 DTX3LQ8TDB6 740 aa14.65□□□□□ -0.06
PRKCB-201ENST00000303531 SEC16BQ96JE7 1060 aa14.65□□□□□ -0.06
PRKCB-201ENST00000303531 OLFM3Q96PB7 478 aa14.65□□□□□ -0.06
PRKCB-201ENST00000303531 GOLPH3Q9H4A6 298 aa14.65□□□□□ -0.06
PRKCB-201ENST00000303531 AIPL1Q9NZN9 384 aa14.65□□□□□ -0.06
PRKCB-201ENST00000303531 MARCOQ9UEW3 520 aaPredicted RBP14.65□□□□□ -0.06
PRKCB-201ENST00000303531 TRAF3IP3Q9Y228 551 aa14.65□□□□□ -0.06
PRKCB-201ENST00000303531 KLHDC7AQ5VTJ3 777 aa14.65□□□□□ -0.06
PRKCB-201ENST00000303531 CHRNA5P30532 468 aa14.65□□□□□ -0.06
PRKCB-201ENST00000303531 ACCSLQ4AC99 568 aa14.65□□□□□ -0.06
PRKCB-201ENST00000303531 RANBP17Q9H2T7 1088 aaKnown RBP14.65□□□□□ -0.06
PRKCB-201ENST00000303531 RFX5P48382 616 aaPredicted RBP14.65□□□□□ -0.06
PRKCB-201ENST00000303531 ZNF200P98182 395 aaPredicted RBP14.65□□□□□ -0.06
PRKCB-201ENST00000303531 TMEM132DQ14C87 1099 aa14.65□□□□□ -0.06
PRKCB-201ENST00000303531 ANO4Q32M45 955 aa14.65□□□□□ -0.06
PRKCB-201ENST00000303531 ELMSAN1Q6PJG2 1045 aa14.65□□□□□ -0.06
PRKCB-201ENST00000303531 IL17RAQ96F46 866 aa14.65□□□□□ -0.06
PRKCB-201ENST00000303531 SGSM3Q96HU1 749 aa14.65□□□□□ -0.06
PRKCB-201ENST00000303531 CRAMP1Q96RY5 1269 aa14.65□□□□□ -0.06
PRKCB-201ENST00000303531 TEX13BQ9BXU2 312 aa14.65□□□□□ -0.06
PRKCB-201ENST00000303531 OSBPL8Q9BZF1 889 aa14.65□□□□□ -0.06
PRKCB-201ENST00000303531 AURKCQ9UQB9 309 aa14.65□□□□□ -0.06
PRKCB-201ENST00000303531 ALG6Q9Y672 507 aa14.65□□□□□ -0.06
PRKCB-201ENST00000303531 ZNF189O75820 626 aaPredicted RBP14.65□□□□□ -0.06
PRKCB-201ENST00000303531 ZBTB7AO95365 584 aa14.65□□□□□ -0.06
PRKCB-201ENST00000303531 CAPRIN2Q6IMN6 1127 aaKnown RBP14.65□□□□□ -0.06
PRKCB-201ENST00000303531 APPL2Q8NEU8 664 aa14.65□□□□□ -0.06
PRKCB-201ENST00000303531 ANKS1AQ92625 1134 aa14.65□□□□□ -0.06
PRKCB-201ENST00000303531 LPAR1Q92633 364 aa14.65□□□□□ -0.06
PRKCB-201ENST00000303531 CHMP2BQ9UQN3 213 aa14.65□□□□□ -0.06
PRKCB-201ENST00000303531 C3orf70A6NLC5 250 aaPredicted RBP14.64□□□□□ -0.07
PRKCB-201ENST00000303531 GFAPP14136 432 aa14.64□□□□□ -0.07
PRKCB-201ENST00000303531 STX3Q13277 289 aa14.64□□□□□ -0.07
PRKCB-201ENST00000303531 CASS4Q9NQ75 786 aa14.64□□□□□ -0.07
PRKCB-201ENST00000303531 PCMTD2Q9NV79 361 aa14.64□□□□□ -0.07
PRKCB-201ENST00000303531 ARHGAP10A1A4S6 786 aa14.64□□□□□ -0.07
PRKCB-201ENST00000303531 STILQ15468 1287 aa14.64□□□□□ -0.07
PRKCB-201ENST00000303531 ISCUQ9H1K1 167 aa14.64□□□□□ -0.07
PRKCB-201ENST00000303531 IL10P22301 178 aa14.64□□□□□ -0.07
PRKCB-201ENST00000303531 TBCCQ15814 346 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms