RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 ASCC2Q9H1I8 757 aaPredicted RBP8.03□□□□□ -1.12
SF3B3-201ENST00000302516 FBXO2Q9UK22 296 aaPredicted RBP8.03□□□□□ -1.12
SF3B3-201ENST00000302516 KDSRQ06136 332 aa8.02□□□□□ -1.12
SF3B3-201ENST00000302516 KCNA1Q09470 495 aa8.02□□□□□ -1.12
SF3B3-201ENST00000302516 ERFEQ4G0M1 354 aa8.02□□□□□ -1.12
SF3B3-201ENST00000302516 LUZP2Q86TE4 346 aa8.02□□□□□ -1.12
SF3B3-201ENST00000302516 C19orf60Q96EN9 201 aa8.02□□□□□ -1.12
SF3B3-201ENST00000302516 NLRP4Q96MN2 994 aa8.02□□□□□ -1.12
SF3B3-201ENST00000302516 RUBCNLQ9H714 662 aa8.02□□□□□ -1.12
SF3B3-201ENST00000302516 MANSC1Q9H8J5 431 aa8.02□□□□□ -1.12
SF3B3-201ENST00000302516 PLEKHA5Q9HAU0 1116 aa8.02□□□□□ -1.12
SF3B3-201ENST00000302516 SLC40A1Q9NP59 571 aa8.02□□□□□ -1.12
SF3B3-201ENST00000302516 AMACRQ9UHK6 382 aa8.02□□□□□ -1.12
SF3B3-201ENST00000302516 POTECB2RU33 542 aa8.02□□□□□ -1.12
SF3B3-201ENST00000302516 TBX3O15119 743 aa8.02□□□□□ -1.12
SF3B3-201ENST00000302516 IL18RAPO95256 599 aa8.02□□□□□ -1.12
SF3B3-201ENST00000302516 METP08581 1390 aa8.02□□□□□ -1.12
SF3B3-201ENST00000302516 FCGR1AP12314 374 aa8.02□□□□□ -1.12
SF3B3-201ENST00000302516 SERPINB3P29508 390 aa8.02□□□□□ -1.12
SF3B3-201ENST00000302516 PTK7Q13308 1070 aa8.02□□□□□ -1.12
SF3B3-201ENST00000302516 LBRQ14739 615 aaKnown RBP8.02□□□□□ -1.12
SF3B3-201ENST00000302516 KRT27Q7Z3Y8 459 aa8.02□□□□□ -1.12
SF3B3-201ENST00000302516 USP38Q8NB14 1042 aa8.02□□□□□ -1.12
SF3B3-201ENST00000302516 PIGOQ8TEQ8 1089 aa8.02□□□□□ -1.12
SF3B3-201ENST00000302516 ERP27Q96DN0 273 aa8.02□□□□□ -1.12
SF3B3-201ENST00000302516 TRIM9Q9C026 710 aa8.02□□□□□ -1.12
SF3B3-201ENST00000302516 PAK5Q9P286 719 aa8.02□□□□□ -1.12
SF3B3-201ENST00000302516 APPL1Q9UKG1 709 aa8.02□□□□□ -1.12
SF3B3-201ENST00000302516 IGF2BP3O00425 579 aaKnown RBP eCLIP8.02□□□□□ -1.133e-6■■■□□ 18.9
SF3B3-201ENST00000302516 UBXN2AP68543 259 aa8.02□□□□□ -1.13
SF3B3-201ENST00000302516 SLC44A4Q53GD3 710 aa8.02□□□□□ -1.13
SF3B3-201ENST00000302516 FBXW10Q5XX13 1052 aa8.02□□□□□ -1.13
SF3B3-201ENST00000302516 LINC00523Q86TU6 105 aa8.02□□□□□ -1.13
SF3B3-201ENST00000302516 RNF217Q8TC41 542 aa8.02□□□□□ -1.13
SF3B3-201ENST00000302516 AIFM3Q96NN9 605 aa8.02□□□□□ -1.13
SF3B3-201ENST00000302516 MLXIPLQ9NP71 852 aa8.02□□□□□ -1.13
SF3B3-201ENST00000302516 IRAK4Q9NWZ3 460 aa8.02□□□□□ -1.13
SF3B3-201ENST00000302516 SCN3BQ9NY72 215 aa8.02□□□□□ -1.13
SF3B3-201ENST00000302516 FAM32AQ9Y421 112 aaKnown RBP8.02□□□□□ -1.13
SF3B3-201ENST00000302516 ZNF263O14978 683 aa8.02□□□□□ -1.13
SF3B3-201ENST00000302516 RALBP11234 206 aa8.02□□□□□ -1.13
SF3B3-201ENST00000302516 PLA2G4AP47712 749 aa8.02□□□□□ -1.13
SF3B3-201ENST00000302516 GEMIN4P57678 1058 aaKnown RBP8.02□□□□□ -1.13
SF3B3-201ENST00000302516 DSTYKQ6XUX3 929 aa8.02□□□□□ -1.13
SF3B3-201ENST00000302516 NSUN6Q8TEA1 469 aaKnown RBP8.02□□□□□ -1.13
SF3B3-201ENST00000302516 MAP3K14Q99558 947 aa8.02□□□□□ -1.13
SF3B3-201ENST00000302516 TUBGCP4Q9UGJ1 667 aa8.02□□□□□ -1.13
SF3B3-201ENST00000302516 MAGED2Q9UNF1 606 aaPredicted RBP8.02□□□□□ -1.13
SF3B3-201ENST00000302516 M0R3G1 203 aa8.02□□□□□ -1.13
SF3B3-201ENST00000302516 AKAP10O43572 662 aa8.02□□□□□ -1.13
SF3B3-201ENST00000302516 RASSF9O75901 435 aa8.02□□□□□ -1.13
SF3B3-201ENST00000302516 KCNA2P16389 499 aa8.02□□□□□ -1.13
SF3B3-201ENST00000302516 FMO5P49326 533 aa8.02□□□□□ -1.13
SF3B3-201ENST00000302516 POU5F1BQ06416 359 aa8.02□□□□□ -1.13
SF3B3-201ENST00000302516 STXBP2Q15833 593 aa8.02□□□□□ -1.13
SF3B3-201ENST00000302516 CYB5R4Q7L1T6 521 aa8.02□□□□□ -1.13
SF3B3-201ENST00000302516 RMDN3Q96TC7 470 aa8.02□□□□□ -1.13
SF3B3-201ENST00000302516 PRPF18Q99633 342 aaKnown RBP8.02□□□□□ -1.13
SF3B3-201ENST00000302516 EGFL8Q99944 293 aa8.02□□□□□ -1.13
SF3B3-201ENST00000302516 MKNK1Q9BUB5 465 aa8.02□□□□□ -1.13
SF3B3-201ENST00000302516 KRCC1Q9NPI7 259 aaPredicted RBP8.02□□□□□ -1.13
SF3B3-201ENST00000302516 USP21Q9UK80 565 aa8.02□□□□□ -1.13
SF3B3-201ENST00000302516 NEU2Q9Y3R4 380 aa8.02□□□□□ -1.13
SF3B3-201ENST00000302516 TMEM120BA0PK00 339 aa8.02□□□□□ -1.13
SF3B3-201ENST00000302516 TMEM47Q9BQJ4 181 aa8.02□□□□□ -1.13
SF3B3-201ENST00000302516 RSAD1Q9HA92 442 aa8.02□□□□□ -1.13
SF3B3-201ENST00000302516 RBAKQ9NYW8 714 aaPredicted RBP8.02□□□□□ -1.13
SF3B3-201ENST00000302516 POTEFA5A3E0 1075 aa8.02□□□□□ -1.13
SF3B3-201ENST00000302516 C5orf58C9J3I9 102 aa8.02□□□□□ -1.13
SF3B3-201ENST00000302516 POTEIP0CG38 1075 aa8.02□□□□□ -1.13
SF3B3-201ENST00000302516 POTEGQ6S5H5 508 aa8.02□□□□□ -1.13
SF3B3-201ENST00000302516 POTEEQ6S8J3 1075 aa8.02□□□□□ -1.13
SF3B3-201ENST00000302516 PRPF39Q86UA1 669 aaKnown RBP8.02□□□□□ -1.13
SF3B3-201ENST00000302516 ARHGEF1Q92888 912 aaKnown RBP8.02□□□□□ -1.13
SF3B3-201ENST00000302516 OPTNQ96CV9 577 aa8.02□□□□□ -1.13
SF3B3-201ENST00000302516 DYNLL2Q96FJ2 89 aa8.02□□□□□ -1.13
SF3B3-201ENST00000302516 XPO7Q9UIA9 1087 aaKnown RBP8.02□□□□□ -1.13
SF3B3-201ENST00000302516 ZDHHC9Q9Y397 364 aa8.02□□□□□ -1.13
SF3B3-201ENST00000302516 OVOS2A0A0G2JMS6 1433 aa8.02□□□□□ -1.13
SF3B3-201ENST00000302516 CYTH1Q15438 398 aa8.02□□□□□ -1.13
SF3B3-201ENST00000302516 ADSSL1Q8N142 457 aa8.02□□□□□ -1.13
SF3B3-201ENST00000302516 ARL8AQ96BM9 186 aa8.02□□□□□ -1.13
SF3B3-201ENST00000302516 ZNF512BQ96KM6 892 aaPredicted RBP8.02□□□□□ -1.13
SF3B3-201ENST00000302516 TNIP3Q96KP6 325 aa8.02□□□□□ -1.13
SF3B3-201ENST00000302516 MED15Q96RN5 788 aa8.02□□□□□ -1.13
SF3B3-201ENST00000302516 EIF2AK1Q9BQI3 630 aaKnown RBP8.02□□□□□ -1.13
SF3B3-201ENST00000302516 ZNF341Q9BYN7 854 aa8.02□□□□□ -1.13
SF3B3-201ENST00000302516 ZNF408Q9H9D4 720 aa8.02□□□□□ -1.13
SF3B3-201ENST00000302516 SYBUQ9NX95 663 aa8.02□□□□□ -1.13
SF3B3-201ENST00000302516 AIPL1Q9NZN9 384 aa8.02□□□□□ -1.13
SF3B3-201ENST00000302516 KANSL1LA0AUZ9 987 aa8.01□□□□□ -1.13
SF3B3-201ENST00000302516 KRT87PA6NCN2 255 aa8.01□□□□□ -1.13
SF3B3-201ENST00000302516 ZNF839A8K0R7 811 aa8.01□□□□□ -1.13
SF3B3-201ENST00000302516 KCNN4O15554 427 aa8.01□□□□□ -1.13
SF3B3-201ENST00000302516 SNRPAP09012 282 aaKnown RBP8.01□□□□□ -1.13
SF3B3-201ENST00000302516 SPRP35270 261 aaPredicted RBP8.01□□□□□ -1.13
SF3B3-201ENST00000302516 CATSPER4Q7RTX7 472 aa8.01□□□□□ -1.13
SF3B3-201ENST00000302516 MFN1Q8IWA4 741 aa8.01□□□□□ -1.13
SF3B3-201ENST00000302516 RIN3Q8TB24 985 aa8.01□□□□□ -1.13
SF3B3-201ENST00000302516 PHF21AQ96BD5 680 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms