RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 PACSIN2Q9UNF0 486 aaPredicted RBP23.93■■□□□ 1.42
SMAD1-201ENST00000302085 MGAMO43451 1857 aa23.92■■□□□ 1.42
SMAD1-201ENST00000302085 GPR32O75388 356 aa23.92■■□□□ 1.42
SMAD1-201ENST00000302085 IL18RAPO95256 599 aa23.92■■□□□ 1.42
SMAD1-201ENST00000302085 TBC1D8O95759 1140 aa23.92■■□□□ 1.42
SMAD1-201ENST00000302085 FGFR4P22455 802 aa23.92■■□□□ 1.42
SMAD1-201ENST00000302085 FCGRTP55899 365 aa23.92■■□□□ 1.42
SMAD1-201ENST00000302085 TUBB4BP68371 445 aa23.92■■□□□ 1.42
SMAD1-201ENST00000302085 TMEM62Q0P6H9 643 aa23.92■■□□□ 1.42
SMAD1-201ENST00000302085 SMIM35A0A1B0GVV1 85 aa23.92■■□□□ 1.42
SMAD1-201ENST00000302085 LACTBL1A8MY62 500 aa23.92■■□□□ 1.42
SMAD1-201ENST00000302085 CYP2C9P11712 490 aa23.92■■□□□ 1.42
SMAD1-201ENST00000302085 TBXAS1P24557 533 aaPredicted RBP23.92■■□□□ 1.42
SMAD1-201ENST00000302085 CAGE1Q8TC20 777 aa23.92■■□□□ 1.42
SMAD1-201ENST00000302085 CNTN6Q9UQ52 1028 aa23.92■■□□□ 1.42
SMAD1-201ENST00000302085 A0A1B0GUA9 196 aa23.91■■□□□ 1.42
SMAD1-201ENST00000302085 AKR1A1P14550 325 aa23.91■■□□□ 1.42
SMAD1-201ENST00000302085 FSCN1Q16658 493 aaKnown RBP23.91■■□□□ 1.42
SMAD1-201ENST00000302085 PARD6BQ9BYG5 372 aa23.91■■□□□ 1.42
SMAD1-201ENST00000302085 COG5Q9UP83 839 aa23.91■■□□□ 1.42
SMAD1-201ENST00000302085 PCDHB4Q9Y5E5 795 aa23.91■■□□□ 1.42
SMAD1-201ENST00000302085 PCDHB2Q9Y5E7 798 aa23.91■■□□□ 1.42
SMAD1-201ENST00000302085 ANK1P16157 1881 aa23.91■■□□□ 1.42
SMAD1-201ENST00000302085 ERLIN2O94905 339 aa23.91■■□□□ 1.42
SMAD1-201ENST00000302085 TMEM191BP0C7N4 346 aa23.91■■□□□ 1.42
SMAD1-201ENST00000302085 LACTBP83111 547 aaPredicted RBP23.91■■□□□ 1.42
SMAD1-201ENST00000302085 ZNF200P98182 395 aaPredicted RBP23.91■■□□□ 1.42
SMAD1-201ENST00000302085 SGSM1Q2NKQ1 1148 aa23.91■■□□□ 1.42
SMAD1-201ENST00000302085 UBR7Q8N806 425 aa23.91■■□□□ 1.42
SMAD1-201ENST00000302085 ANKZF1Q9H8Y5 726 aa23.91■■□□□ 1.42
SMAD1-201ENST00000302085 STXBP5LQ9Y2K9 1186 aa23.91■■□□□ 1.42
SMAD1-201ENST00000302085 TNNC2P02585 160 aa23.9■■□□□ 1.42
SMAD1-201ENST00000302085 BPIFB4P59827 614 aa23.9■■□□□ 1.42
SMAD1-201ENST00000302085 GPC5P78333 572 aa23.9■■□□□ 1.42
SMAD1-201ENST00000302085 CDC42EP1Q00587 391 aa23.9■■□□□ 1.42
SMAD1-201ENST00000302085 POU5F1Q01860 360 aaKnown RBP23.9■■□□□ 1.42
SMAD1-201ENST00000302085 TCEAL1Q15170 157 aa23.9■■□□□ 1.42
SMAD1-201ENST00000302085 TRIB2Q92519 343 aa23.9■■□□□ 1.42
SMAD1-201ENST00000302085 GCOM2Q9BZD3 368 aaPredicted RBP23.9■■□□□ 1.42
SMAD1-201ENST00000302085 IMPG2Q9BZV3 1241 aa23.9■■□□□ 1.42
SMAD1-201ENST00000302085 ALDH1A1P00352 501 aa23.89■■□□□ 1.42
SMAD1-201ENST00000302085 TRPC3Q13507 836 aa23.89■■□□□ 1.42
SMAD1-201ENST00000302085 SLC10A6Q3KNW5 377 aa23.89■■□□□ 1.42
SMAD1-201ENST00000302085 ZNF572Q7Z3I7 529 aaPredicted RBP23.89■■□□□ 1.42
SMAD1-201ENST00000302085 ANKRD36BP1Q96IX9 119 aa23.89■■□□□ 1.42
SMAD1-201ENST00000302085 RPGRIP1Q96KN7 1286 aa23.89■■□□□ 1.42
SMAD1-201ENST00000302085 XYLT2Q9H1B5 865 aa23.89■■□□□ 1.42
SMAD1-201ENST00000302085 SMARCAL1Q9NZC9 954 aa23.89■■□□□ 1.42
SMAD1-201ENST00000302085 GINS2Q9Y248 185 aa23.89■■□□□ 1.42
SMAD1-201ENST00000302085 MYADML2A6NDP7 307 aa23.89■■□□□ 1.41
SMAD1-201ENST00000302085 TREHO43280 583 aa23.89■■□□□ 1.41
SMAD1-201ENST00000302085 BUB1BO60566 1050 aaPredicted RBP23.89■■□□□ 1.41
SMAD1-201ENST00000302085 DUSP11O75319 330 aaKnown RBP23.89■■□□□ 1.41
SMAD1-201ENST00000302085 KIF4AO95239 1232 aa23.89■■□□□ 1.41
SMAD1-201ENST00000302085 NFICP08651 508 aa23.89■■□□□ 1.41
SMAD1-201ENST00000302085 CYBAP13498 195 aa23.89■■□□□ 1.41
SMAD1-201ENST00000302085 HOXA11P31270 313 aaPredicted RBP23.89■■□□□ 1.41
SMAD1-201ENST00000302085 FLT3LGP49771 235 aa23.89■■□□□ 1.41
SMAD1-201ENST00000302085 DNA2P51530 1060 aa23.89■■□□□ 1.41
SMAD1-201ENST00000302085 PURAQ00577 322 aaKnown RBP23.89■■□□□ 1.41
SMAD1-201ENST00000302085 RPS6KA1Q15418 735 aa23.89■■□□□ 1.41
SMAD1-201ENST00000302085 CLEC16AQ2KHT3 1053 aa23.89■■□□□ 1.41
SMAD1-201ENST00000302085 ACAD10Q6JQN1 1059 aa23.89■■□□□ 1.41
SMAD1-201ENST00000302085 TMEM270Q6UE05 265 aa23.89■■□□□ 1.41
SMAD1-201ENST00000302085 MTERF4Q7Z6M4 381 aaKnown RBP23.89■■□□□ 1.41
SMAD1-201ENST00000302085 ABCB6Q9NP58 842 aa23.89■■□□□ 1.41
SMAD1-201ENST00000302085 EHD2Q9NZN4 543 aa23.89■■□□□ 1.41
SMAD1-201ENST00000302085 AOC2O75106 756 aa23.88■■□□□ 1.41
SMAD1-201ENST00000302085 CLSTN1O94985 981 aa23.88■■□□□ 1.41
SMAD1-201ENST00000302085 CAP1Q01518 475 aa23.88■■□□□ 1.41
SMAD1-201ENST00000302085 KYAT1Q16773 422 aa23.88■■□□□ 1.41
SMAD1-201ENST00000302085 PTPROQ16827 1216 aa23.88■■□□□ 1.41
SMAD1-201ENST00000302085 MFSD14CQ5VZR4 134 aa23.88■■□□□ 1.41
SMAD1-201ENST00000302085 JADE1Q6IE81 842 aa23.88■■□□□ 1.41
SMAD1-201ENST00000302085 DAAM2Q86T65 1068 aa23.88■■□□□ 1.41
SMAD1-201ENST00000302085 NT5DC3Q86UY8 548 aa23.88■■□□□ 1.41
SMAD1-201ENST00000302085 ZNF677Q86XU0 584 aa23.88■■□□□ 1.41
SMAD1-201ENST00000302085 SYCE1Q8N0S2 351 aa23.88■■□□□ 1.41
SMAD1-201ENST00000302085 TMEM130Q8N3G9 435 aa23.88■■□□□ 1.41
SMAD1-201ENST00000302085 RBBP8NLQ8NC74 664 aaPredicted RBP23.88■■□□□ 1.41
SMAD1-201ENST00000302085 MSANTD4Q8NCY6 345 aa23.88■■□□□ 1.41
SMAD1-201ENST00000302085 DNAJB3Q8WWF6 145 aa23.88■■□□□ 1.41
SMAD1-201ENST00000302085 MS4A14Q96JA4 679 aa23.88■■□□□ 1.41
SMAD1-201ENST00000302085 RHOXF2BP0C7M4 288 aa23.87■■□□□ 1.41
SMAD1-201ENST00000302085 HADHBP55084 474 aaKnown RBP23.87■■□□□ 1.41
SMAD1-201ENST00000302085 RHOT2Q8IXI1 618 aa23.87■■□□□ 1.41
SMAD1-201ENST00000302085 RHOXF2Q9BQY4 288 aa23.87■■□□□ 1.41
SMAD1-201ENST00000302085 SIX4Q9UIU6 781 aa23.87■■□□□ 1.41
SMAD1-201ENST00000302085 DARSP14868 501 aaKnown RBP23.87■■□□□ 1.41
SMAD1-201ENST00000302085 CLCN6P51797 869 aa23.87■■□□□ 1.41
SMAD1-201ENST00000302085 PEX26Q7Z412 305 aa23.87■■□□□ 1.41
SMAD1-201ENST00000302085 OSMRQ99650 979 aa23.87■■□□□ 1.41
SMAD1-201ENST00000302085 KATNAL1Q9BW62 490 aa23.87■■□□□ 1.41
SMAD1-201ENST00000302085 NIF3L1Q9GZT8 377 aa23.87■■□□□ 1.41
SMAD1-201ENST00000302085 ASB7Q9H672 318 aa23.87■■□□□ 1.41
SMAD1-201ENST00000302085 C6orf222P0C671 652 aaPredicted RBP23.86■■□□□ 1.41
SMAD1-201ENST00000302085 UNGP13051 313 aaPredicted RBP23.86■■□□□ 1.41
SMAD1-201ENST00000302085 C2orf54Q08AI8 447 aa23.86■■□□□ 1.41
SMAD1-201ENST00000302085 C1orf127Q8N9H9 656 aa23.86■■□□□ 1.41
SMAD1-201ENST00000302085 CTTNBP2NLQ9P2B4 639 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms