RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 PIK3R5Q8WYR1 880 aa23.46■■□□□ 1.35
TPM4-201ENST00000300933 SPATA33Q96N06 139 aa23.46■■□□□ 1.35
TPM4-201ENST00000300933 MMP19Q99542 508 aa23.46■■□□□ 1.35
TPM4-201ENST00000300933 GPR20Q99678 358 aa23.46■■□□□ 1.35
TPM4-201ENST00000300933 IGBP1P78318 339 aa23.45■■□□□ 1.34
TPM4-201ENST00000300933 PAK2Q13177 524 aa23.45■■□□□ 1.34
TPM4-201ENST00000300933 WDR44Q5JSH3 913 aa23.45■■□□□ 1.34
TPM4-201ENST00000300933 NLRP14Q86W24 1093 aa23.45■■□□□ 1.34
TPM4-201ENST00000300933 MYCBPAPQ8TBZ2 947 aa23.45■■□□□ 1.34
TPM4-201ENST00000300933 A0A0B4J269 797 aa23.45■■□□□ 1.34
TPM4-201ENST00000300933 TCRBV7S2A1N4TA0A589 114 aa23.45■■□□□ 1.34
TPM4-201ENST00000300933 CST3P01034 146 aaPredicted RBP23.45■■□□□ 1.34
TPM4-201ENST00000300933 EPHX2P34913 555 aa23.45■■□□□ 1.34
TPM4-201ENST00000300933 RHPN2Q8IUC4 686 aa23.45■■□□□ 1.34
TPM4-201ENST00000300933 CEP350Q5VT06 3117 aa23.45■■□□□ 1.34
TPM4-201ENST00000300933 CLDN3O15551 220 aa23.44■■□□□ 1.34
TPM4-201ENST00000300933 ADCY3O60266 1144 aa23.44■■□□□ 1.34
TPM4-201ENST00000300933 POTEJP0CG39 1038 aa23.44■■□□□ 1.34
TPM4-201ENST00000300933 FAM160B1Q5W0V3 765 aa23.44■■□□□ 1.34
TPM4-201ENST00000300933 TMEM270Q6UE05 265 aa23.44■■□□□ 1.34
TPM4-201ENST00000300933 DHX37Q8IY37 1157 aaKnown RBP23.44■■□□□ 1.34
TPM4-201ENST00000300933 NLRP4Q96MN2 994 aa23.44■■□□□ 1.34
TPM4-201ENST00000300933 CNOT8Q9UFF9 292 aaKnown RBP23.44■■□□□ 1.34
TPM4-201ENST00000300933 ZNFX1Q9P2E3 1918 aaKnown RBP23.44■■□□□ 1.34
TPM4-201ENST00000300933 GTF2H1P32780 548 aa23.44■■□□□ 1.34
TPM4-201ENST00000300933 RDXP35241 583 aaKnown RBP23.44■■□□□ 1.34
TPM4-201ENST00000300933 CEP85LQ5SZL2 805 aa23.44■■□□□ 1.34
TPM4-201ENST00000300933 CCDC13Q8IYE1 715 aa23.44■■□□□ 1.34
TPM4-201ENST00000300933 ZDHHC14Q8IZN3 488 aa23.44■■□□□ 1.34
TPM4-201ENST00000300933 NUB1Q9Y5A7 615 aa23.44■■□□□ 1.34
TPM4-201ENST00000300933 ZBTB42B2RXF5 422 aa23.43■■□□□ 1.34
TPM4-201ENST00000300933 H0YCG3 227 aa23.43■■□□□ 1.34
TPM4-201ENST00000300933 CXCL11O14625 94 aa23.43■■□□□ 1.34
TPM4-201ENST00000300933 SPOPO43791 374 aa23.43■■□□□ 1.34
TPM4-201ENST00000300933 PYGMP11217 842 aa23.43■■□□□ 1.34
TPM4-201ENST00000300933 GZMAP12544 262 aa23.43■■□□□ 1.34
TPM4-201ENST00000300933 ECHS1P30084 290 aa23.43■■□□□ 1.34
TPM4-201ENST00000300933 MDH1P40925 334 aaKnown RBP23.43■■□□□ 1.34
TPM4-201ENST00000300933 LAMTOR4Q0VGL1 99 aa23.43■■□□□ 1.34
TPM4-201ENST00000300933 CYFIP2Q96F07 1278 aa23.43■■□□□ 1.34
TPM4-201ENST00000300933 KLC4Q9NSK0 619 aa23.43■■□□□ 1.34
TPM4-201ENST00000300933 DAAM1Q9Y4D1 1078 aa23.43■■□□□ 1.34
TPM4-201ENST00000300933 STYXL1Q9Y6J8 313 aa23.43■■□□□ 1.34
TPM4-201ENST00000300933 ATP8B3O60423 1300 aa23.43■■□□□ 1.34
TPM4-201ENST00000300933 ATXN2Q99700 1313 aaKnown RBP23.43■■□□□ 1.34
TPM4-201ENST00000300933 MAFO75444 373 aaPredicted RBP23.43■■□□□ 1.34
TPM4-201ENST00000300933 TXNP10599 105 aaKnown RBP23.43■■□□□ 1.34
TPM4-201ENST00000300933 ACTN3Q08043 901 aaPredicted RBP23.43■■□□□ 1.34
TPM4-201ENST00000300933 GPAT2Q6NUI2 795 aa23.43■■□□□ 1.34
TPM4-201ENST00000300933 SPATS2Q86XZ4 545 aaKnown RBP23.43■■□□□ 1.34
TPM4-201ENST00000300933 TAF1DQ9H5J8 278 aaPredicted RBP23.43■■□□□ 1.34
TPM4-201ENST00000300933 B4GALT5O43286 388 aa23.42■■□□□ 1.34
TPM4-201ENST00000300933 TNFRSF8P28908 595 aa23.42■■□□□ 1.34
TPM4-201ENST00000300933 CLCN3P51790 818 aa23.42■■□□□ 1.34
TPM4-201ENST00000300933 ZNF394Q53GI3 561 aa23.42■■□□□ 1.34
TPM4-201ENST00000300933 CELF3Q5SZQ8 465 aaKnown RBP23.42■■□□□ 1.34
TPM4-201ENST00000300933 CEP120Q8N960 986 aa23.42■■□□□ 1.34
TPM4-201ENST00000300933 VTI1AQ96AJ9 217 aa23.42■■□□□ 1.34
TPM4-201ENST00000300933 ATP6V1G3Q96LB4 118 aa23.42■■□□□ 1.34
TPM4-201ENST00000300933 PCDHB4Q9Y5E5 795 aa23.42■■□□□ 1.34
TPM4-201ENST00000300933 GJB6O95452 261 aa23.42■■□□□ 1.34
TPM4-201ENST00000300933 TGFB3P10600 412 aa23.42■■□□□ 1.34
TPM4-201ENST00000300933 RRM1P23921 792 aa23.42■■□□□ 1.34
TPM4-201ENST00000300933 GCNT1Q02742 428 aa23.42■■□□□ 1.34
TPM4-201ENST00000300933 ACAD10Q6JQN1 1059 aa23.42■■□□□ 1.34
TPM4-201ENST00000300933 OR2W6PQ8NHA6 318 aa23.42■■□□□ 1.34
TPM4-201ENST00000300933 C18orf8Q96DM3 657 aa23.42■■□□□ 1.34
TPM4-201ENST00000300933 PLAAQ9Y263 795 aa23.42■■□□□ 1.34
TPM4-201ENST00000300933 CNTNAP2Q9UHC6 1331 aa23.41■■□□□ 1.34
TPM4-201ENST00000300933 MCCD1P59942 119 aaPredicted RBP23.41■■□□□ 1.34
TPM4-201ENST00000300933 THNSL1Q8IYQ7 743 aa23.41■■□□□ 1.34
TPM4-201ENST00000300933 GIMAP7Q8NHV1 300 aa23.41■■□□□ 1.34
TPM4-201ENST00000300933 CALR3Q96L12 384 aaKnown RBP23.41■■□□□ 1.34
TPM4-201ENST00000300933 ZSWIM1Q9BR11 485 aa23.41■■□□□ 1.34
TPM4-201ENST00000300933 CARD9Q9H257 536 aa23.41■■□□□ 1.34
TPM4-201ENST00000300933 RNPEPQ9H4A4 650 aa23.41■■□□□ 1.34
TPM4-201ENST00000300933 SUFUQ9UMX1 484 aa23.41■■□□□ 1.34
TPM4-201ENST00000300933 MSCO60682 206 aa23.41■■□□□ 1.34
TPM4-201ENST00000300933 RFC5P40937 340 aa23.41■■□□□ 1.34
TPM4-201ENST00000300933 PSEN1P49768 467 aa23.41■■□□□ 1.34
TPM4-201ENST00000300933 CLEC16AQ2KHT3 1053 aa23.41■■□□□ 1.34
TPM4-201ENST00000300933 DPY19L2Q6NUT2 758 aa23.41■■□□□ 1.34
TPM4-201ENST00000300933 MTMR12Q9C0I1 747 aa23.41■■□□□ 1.34
TPM4-201ENST00000300933 KIAA1586Q9HCI6 787 aa23.41■■□□□ 1.34
TPM4-201ENST00000300933 ADGRA2Q96PE1 1338 aa23.4■■□□□ 1.34
TPM4-201ENST00000300933 CD58P19256 250 aa23.4■■□□□ 1.34
TPM4-201ENST00000300933 CLDN10P78369 228 aa23.4■■□□□ 1.34
TPM4-201ENST00000300933 PLCB4Q15147 1175 aa23.4■■□□□ 1.34
TPM4-201ENST00000300933 SLFN12LQ6IEE8 588 aa23.4■■□□□ 1.34
TPM4-201ENST00000300933 ANAPC7Q9UJX3 599 aa23.4■■□□□ 1.34
TPM4-201ENST00000300933 KCNH4Q9UQ05 1017 aa23.4■■□□□ 1.34
TPM4-201ENST00000300933 EVPLQ92817 2033 aa23.4■■□□□ 1.34
TPM4-201ENST00000300933 PEX5P50542 639 aa23.4■■□□□ 1.34
TPM4-201ENST00000300933 PPP1R13LQ8WUF5 828 aa23.4■■□□□ 1.34
TPM4-201ENST00000300933 CCDC188H7C350 402 aa23.39■■□□□ 1.34
TPM4-201ENST00000300933 INO80B-WBP1J3KQ70 363 aa23.39■■□□□ 1.34
TPM4-201ENST00000300933 CHUKO15111 745 aa23.39■■□□□ 1.34
TPM4-201ENST00000300933 SLC25A27O95847 323 aa23.39■■□□□ 1.34
TPM4-201ENST00000300933 CYP1A2P05177 515 aa23.39■■□□□ 1.34
TPM4-201ENST00000300933 NOP14P78316 857 aaKnown RBP23.39■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms