RNA–Protein interactions for RNA: ENST00000299162.9

FOXN4-201, Transcript of forkhead box N4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXN4, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-201ENST00000299162 REPS2Q8NFH8 660 aa10.79□□□□□ -0.68
FOXN4-201ENST00000299162 MYCBPAPQ8TBZ2 947 aa10.79□□□□□ -0.68
FOXN4-201ENST00000299162 HELQQ8TDG4 1101 aa10.79□□□□□ -0.68
FOXN4-201ENST00000299162 HES6Q96HZ4 224 aa10.79□□□□□ -0.68
FOXN4-201ENST00000299162 INO80BQ9C086 356 aaPredicted RBP10.79□□□□□ -0.68
FOXN4-201ENST00000299162 NXF1Q9UBU9 619 aaKnown RBP10.79□□□□□ -0.68
FOXN4-201ENST00000299162 DDX20Q9UHI6 824 aaKnown RBP10.79□□□□□ -0.68
FOXN4-201ENST00000299162 DDX3YO15523 660 aaKnown RBP10.78□□□□□ -0.68
FOXN4-201ENST00000299162 GLRA2P23416 452 aa10.78□□□□□ -0.68
FOXN4-201ENST00000299162 MAPK4P31152 587 aa10.78□□□□□ -0.68
FOXN4-201ENST00000299162 STAT5BP51692 787 aa10.78□□□□□ -0.68
FOXN4-201ENST00000299162 MTA1Q13330 715 aa10.78□□□□□ -0.68
FOXN4-201ENST00000299162 MTM1Q13496 603 aa10.78□□□□□ -0.68
FOXN4-201ENST00000299162 HSDL1Q3SXM5 330 aa10.78□□□□□ -0.68
FOXN4-201ENST00000299162 KRT71Q3SY84 523 aa10.78□□□□□ -0.68
FOXN4-201ENST00000299162 XKR3Q5GH77 459 aa10.78□□□□□ -0.68
FOXN4-201ENST00000299162 SEL1L2Q5TEA6 688 aa10.78□□□□□ -0.68
FOXN4-201ENST00000299162 ABHD15Q6UXT9 468 aa10.78□□□□□ -0.68
FOXN4-201ENST00000299162 PARP9Q8IXQ6 854 aa10.78□□□□□ -0.68
FOXN4-201ENST00000299162 UBL4BQ8N7F7 174 aa10.78□□□□□ -0.68
FOXN4-201ENST00000299162 RNF149Q8NC42 400 aa10.78□□□□□ -0.68
FOXN4-201ENST00000299162 SCFD2Q8WU76 684 aa10.78□□□□□ -0.68
FOXN4-201ENST00000299162 FAM210AQ96ND0 272 aa10.78□□□□□ -0.68
FOXN4-201ENST00000299162 TNS1Q9HBL0 1735 aaKnown RBP10.78□□□□□ -0.68
FOXN4-201ENST00000299162 PI4K2BG5E9Z4 385 aa10.78□□□□□ -0.68
FOXN4-201ENST00000299162 OATP04181 439 aa10.78□□□□□ -0.68
FOXN4-201ENST00000299162 ADCY1Q08828 1119 aa10.78□□□□□ -0.68
FOXN4-201ENST00000299162 ALCAMQ13740 583 aa10.78□□□□□ -0.68
FOXN4-201ENST00000299162 ACCSLQ4AC99 568 aa10.78□□□□□ -0.68
FOXN4-201ENST00000299162 BRDTQ58F21 947 aaPredicted RBP10.78□□□□□ -0.68
FOXN4-201ENST00000299162 FAM133BQ5BKY9 247 aaKnown RBP10.78□□□□□ -0.68
FOXN4-201ENST00000299162 TDRD10Q5VZ19 366 aaKnown RBP10.78□□□□□ -0.68
FOXN4-201ENST00000299162 ACTRT1Q8TDG2 376 aa10.78□□□□□ -0.68
FOXN4-201ENST00000299162 PRPF31Q8WWY3 499 aaKnown RBP10.78□□□□□ -0.68
FOXN4-201ENST00000299162 HAUS1Q96CS2 278 aa10.78□□□□□ -0.68
FOXN4-201ENST00000299162 HAPLN2Q9GZV7 340 aa10.78□□□□□ -0.68
FOXN4-201ENST00000299162 AZI2Q9H6S1 392 aa10.78□□□□□ -0.68
FOXN4-201ENST00000299162 DAAM1Q9Y4D1 1078 aa10.78□□□□□ -0.68
FOXN4-201ENST00000299162 AFG3L2Q9Y4W6 797 aa10.78□□□□□ -0.68
FOXN4-201ENST00000299162 C19orf81C9J6K1 198 aa10.77□□□□□ -0.68
FOXN4-201ENST00000299162 THAP12O43422 761 aa10.77□□□□□ -0.68
FOXN4-201ENST00000299162 PYGLP06737 847 aa10.77□□□□□ -0.68
FOXN4-201ENST00000299162 WEE2P0C1S8 567 aa10.77□□□□□ -0.68
FOXN4-201ENST00000299162 GLE1Q53GS7 698 aaKnown RBP10.77□□□□□ -0.68
FOXN4-201ENST00000299162 FAM71AQ8IYT1 594 aa10.77□□□□□ -0.68
FOXN4-201ENST00000299162 EPN3Q9H201 632 aa10.77□□□□□ -0.68
FOXN4-201ENST00000299162 NOCTQ9UK39 431 aaKnown RBP10.77□□□□□ -0.68
FOXN4-201ENST00000299162 STXBP5LQ9Y2K9 1186 aa10.77□□□□□ -0.68
FOXN4-201ENST00000299162 L3MBTL1Q9Y468 752 aa10.77□□□□□ -0.68
FOXN4-201ENST00000299162 SNCAIPQ9Y6H5 919 aa10.77□□□□□ -0.68
FOXN4-201ENST00000299162 POLR2AP24928 1970 aaKnown RBP10.77□□□□□ -0.68
FOXN4-201ENST00000299162 A0A1B0GUA9 196 aa10.77□□□□□ -0.69
FOXN4-201ENST00000299162 DCDC2CA8MYV0 355 aa10.77□□□□□ -0.69
FOXN4-201ENST00000299162 PIK3R2O00459 728 aa10.77□□□□□ -0.69
FOXN4-201ENST00000299162 CYP2C8P10632 490 aa10.77□□□□□ -0.69
FOXN4-201ENST00000299162 FGFR4P22455 802 aa10.77□□□□□ -0.69
FOXN4-201ENST00000299162 PSMC4P43686 418 aa10.77□□□□□ -0.69
FOXN4-201ENST00000299162 ALDH5A1P51649 535 aaPredicted RBP10.77□□□□□ -0.69
FOXN4-201ENST00000299162 ITIH3Q06033 890 aa10.77□□□□□ -0.69
FOXN4-201ENST00000299162 PTGISQ16647 500 aa10.77□□□□□ -0.69
FOXN4-201ENST00000299162 Q3C1V9 767 aa10.77□□□□□ -0.69
FOXN4-201ENST00000299162 HP1BP3Q5SSJ5 553 aaPredicted RBP10.77□□□□□ -0.69
FOXN4-201ENST00000299162 CYB5D1Q6P9G0 228 aa10.77□□□□□ -0.69
FOXN4-201ENST00000299162 ARMCX6Q7L4S7 300 aa10.77□□□□□ -0.69
FOXN4-201ENST00000299162 TBC1D1Q86TI0 1168 aaPredicted RBP10.77□□□□□ -0.69
FOXN4-201ENST00000299162 FMNL3Q8IVF7 1028 aa10.77□□□□□ -0.69
FOXN4-201ENST00000299162 MDM1Q8TC05 714 aa10.77□□□□□ -0.69
FOXN4-201ENST00000299162 FBXO25Q8TCJ0 367 aa10.77□□□□□ -0.69
FOXN4-201ENST00000299162 SPDL1Q96EA4 605 aa10.77□□□□□ -0.69
FOXN4-201ENST00000299162 SELENOSQ9BQE4 189 aa10.77□□□□□ -0.69
FOXN4-201ENST00000299162 MTMR12Q9C0I1 747 aa10.77□□□□□ -0.69
FOXN4-201ENST00000299162 TXNRD2Q9NNW7 524 aa10.77□□□□□ -0.69
FOXN4-201ENST00000299162 PDGFCQ9NRA1 345 aa10.77□□□□□ -0.69
FOXN4-201ENST00000299162 LYPLA2O95372 231 aa10.77□□□□□ -0.69
FOXN4-201ENST00000299162 ARIH2O95376 493 aa10.77□□□□□ -0.69
FOXN4-201ENST00000299162 CLCN3P51790 818 aa10.77□□□□□ -0.69
FOXN4-201ENST00000299162 QPCTQ16769 361 aa10.77□□□□□ -0.69
FOXN4-201ENST00000299162 RHOT2Q8IXI1 618 aa10.77□□□□□ -0.69
FOXN4-201ENST00000299162 ZDHHC14Q8IZN3 488 aa10.77□□□□□ -0.69
FOXN4-201ENST00000299162 PWWP2AQ96N64 755 aa10.77□□□□□ -0.69
FOXN4-201ENST00000299162 FAM167BQ9BTA0 163 aa10.77□□□□□ -0.69
FOXN4-201ENST00000299162 VPS33BQ9H267 617 aa10.77□□□□□ -0.69
FOXN4-201ENST00000299162 NOVA2Q9UNW9 492 aaKnown RBP10.77□□□□□ -0.69
FOXN4-201ENST00000299162 SPATA31C2B4DYI2 1134 aa10.76□□□□□ -0.69
FOXN4-201ENST00000299162 NSFP46459 744 aaKnown RBP10.76□□□□□ -0.69
FOXN4-201ENST00000299162 FNTAP49354 379 aa10.76□□□□□ -0.69
FOXN4-201ENST00000299162 CCDC137Q6PK04 289 aaKnown RBP10.76□□□□□ -0.69
FOXN4-201ENST00000299162 CAPN12Q6ZSI9 719 aa10.76□□□□□ -0.69
FOXN4-201ENST00000299162 ZNF572Q7Z3I7 529 aaPredicted RBP10.76□□□□□ -0.69
FOXN4-201ENST00000299162 USP37Q86T82 979 aa10.76□□□□□ -0.69
FOXN4-201ENST00000299162 KCTD17Q8N5Z5 321 aa10.76□□□□□ -0.69
FOXN4-201ENST00000299162 SHC3Q92529 594 aa10.76□□□□□ -0.69
FOXN4-201ENST00000299162 RNF25Q96BH1 459 aaPredicted RBP10.76□□□□□ -0.69
FOXN4-201ENST00000299162 MRRFQ96E11 262 aaKnown RBP10.76□□□□□ -0.69
FOXN4-201ENST00000299162 FMO2Q99518 471 aa10.76□□□□□ -0.69
FOXN4-201ENST00000299162 SYT11Q9BT88 431 aa10.76□□□□□ -0.69
FOXN4-201ENST00000299162 ADAM33Q9BZ11 813 aa10.76□□□□□ -0.69
FOXN4-201ENST00000299162 SPATC1LQ9H0A9 340 aa10.76□□□□□ -0.69
FOXN4-201ENST00000299162 ISCUQ9H1K1 167 aa10.76□□□□□ -0.69
FOXN4-201ENST00000299162 TPX2Q9ULW0 747 aaKnown RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms