RNA–Protein interactions for RNA: ENST00000297933.10

GAPVD1-202, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GAPVD1, Length 6,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-202ENST00000297933 PDAP1Q13442 181 aaKnown RBP7.3□□□□□ -1.24
GAPVD1-202ENST00000297933 NBPF9Q3BBW0 867 aa7.3□□□□□ -1.24
GAPVD1-202ENST00000297933 WHAMMQ8TF30 809 aa7.3□□□□□ -1.24
GAPVD1-202ENST00000297933 SCFD1Q8WVM8 642 aa7.3□□□□□ -1.24
GAPVD1-202ENST00000297933 GBP5Q96PP8 586 aa7.3□□□□□ -1.24
GAPVD1-202ENST00000297933 AGPAT1Q99943 283 aa7.3□□□□□ -1.24
GAPVD1-202ENST00000297933 REEP2Q9BRK0 252 aa7.3□□□□□ -1.24
GAPVD1-202ENST00000297933 RNF208Q9H0X6 261 aa7.3□□□□□ -1.24
GAPVD1-202ENST00000297933 IGSF9BQ9UPX0 1349 aa7.3□□□□□ -1.24
GAPVD1-202ENST00000297933 EXTL3O43909 919 aa7.29□□□□□ -1.24
GAPVD1-202ENST00000297933 SYNCRIPO60506 623 aaKnown RBP7.29□□□□□ -1.24
GAPVD1-202ENST00000297933 ALDH1A2O94788 518 aa7.29□□□□□ -1.24
GAPVD1-202ENST00000297933 DDHD2O94830 711 aa7.29□□□□□ -1.24
GAPVD1-202ENST00000297933 CYP2C19P33261 490 aa7.29□□□□□ -1.24
GAPVD1-202ENST00000297933 KPNA1P52294 538 aaPredicted RBP7.29□□□□□ -1.24
GAPVD1-202ENST00000297933 EIF3BP55884 814 aaKnown RBP7.29□□□□□ -1.24
GAPVD1-202ENST00000297933 CXCL9Q07325 125 aa7.29□□□□□ -1.24
GAPVD1-202ENST00000297933 TBC1D1Q86TI0 1168 aaPredicted RBP7.29□□□□□ -1.24
GAPVD1-202ENST00000297933 IGFLR1Q9H665 355 aa7.29□□□□□ -1.24
GAPVD1-202ENST00000297933 ANKEF1Q9NU02 776 aa7.29□□□□□ -1.24
GAPVD1-202ENST00000297933 DPP3Q9NY33 737 aa7.29□□□□□ -1.24
GAPVD1-202ENST00000297933 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.29□□□□□ -1.24
GAPVD1-202ENST00000297933 CFAP99D6REC4 459 aa7.29□□□□□ -1.24
GAPVD1-202ENST00000297933 RTN2O75298 545 aa7.29□□□□□ -1.24
GAPVD1-202ENST00000297933 KRT14P02533 472 aa7.29□□□□□ -1.24
GAPVD1-202ENST00000297933 EIF3EP60228 445 aaKnown RBP7.29□□□□□ -1.24
GAPVD1-202ENST00000297933 SLC7A5Q01650 507 aa7.29□□□□□ -1.24
GAPVD1-202ENST00000297933 EIF2B5Q13144 721 aaKnown RBP7.29□□□□□ -1.24
GAPVD1-202ENST00000297933 ZNF177Q13360 481 aaPredicted RBP7.29□□□□□ -1.24
GAPVD1-202ENST00000297933 SMAD1Q15797 465 aaKnown RBP7.29□□□□□ -1.24
GAPVD1-202ENST00000297933 FASTKD1Q53R41 847 aaKnown RBP7.29□□□□□ -1.24
GAPVD1-202ENST00000297933 PKN3Q6P5Z2 889 aa7.29□□□□□ -1.24
GAPVD1-202ENST00000297933 PPM1NQ8N819 430 aa7.29□□□□□ -1.24
GAPVD1-202ENST00000297933 RABGGTAQ92696 567 aa7.29□□□□□ -1.24
GAPVD1-202ENST00000297933 HPDLQ96IR7 371 aa7.29□□□□□ -1.24
GAPVD1-202ENST00000297933 ZDHHC15Q96MV8 337 aa7.29□□□□□ -1.24
GAPVD1-202ENST00000297933 EMILIN2Q9BXX0 1053 aa7.29□□□□□ -1.24
GAPVD1-202ENST00000297933 RASSF4Q9H2L5 321 aa7.29□□□□□ -1.24
GAPVD1-202ENST00000297933 CNOT10Q9H9A5 744 aaKnown RBP7.29□□□□□ -1.24
GAPVD1-202ENST00000297933 TBKBP1A7MCY6 615 aa7.29□□□□□ -1.24
GAPVD1-202ENST00000297933 NDUFS3O75489 264 aa7.29□□□□□ -1.24
GAPVD1-202ENST00000297933 KCNA2P16389 499 aa7.29□□□□□ -1.24
GAPVD1-202ENST00000297933 LIG3P49916 1009 aa7.29□□□□□ -1.24
GAPVD1-202ENST00000297933 CLNS1AP54105 237 aaKnown RBP7.29□□□□□ -1.24
GAPVD1-202ENST00000297933 CTXN3Q4LDR2 81 aa7.29□□□□□ -1.24
GAPVD1-202ENST00000297933 WDR75Q8IWA0 830 aaKnown RBP7.29□□□□□ -1.24
GAPVD1-202ENST00000297933 HS6ST3Q8IZP7 471 aa7.29□□□□□ -1.24
GAPVD1-202ENST00000297933 RBBP8NLQ8NC74 664 aaPredicted RBP7.29□□□□□ -1.24
GAPVD1-202ENST00000297933 BHMTQ93088 406 aa7.29□□□□□ -1.24
GAPVD1-202ENST00000297933 TRAIPQ9BWF2 469 aa7.29□□□□□ -1.24
GAPVD1-202ENST00000297933 KCNN4O15554 427 aa7.29□□□□□ -1.24
GAPVD1-202ENST00000297933 NPM3O75607 178 aaKnown RBP7.29□□□□□ -1.24
GAPVD1-202ENST00000297933 NCAM1P13591 858 aa7.29□□□□□ -1.24
GAPVD1-202ENST00000297933 DNAJB2P25686 324 aa7.29□□□□□ -1.24
GAPVD1-202ENST00000297933 ETFBP38117 255 aa7.29□□□□□ -1.24
GAPVD1-202ENST00000297933 ATXN3P54252 364 aaPredicted RBP7.29□□□□□ -1.24
GAPVD1-202ENST00000297933 EFHC1Q5JVL4 640 aa7.29□□□□□ -1.24
GAPVD1-202ENST00000297933 TRMT10CQ7L0Y3 403 aaKnown RBP7.29□□□□□ -1.24
GAPVD1-202ENST00000297933 DDIASQ8IXT1 998 aa7.29□□□□□ -1.24
GAPVD1-202ENST00000297933 PPP1R2P1Q96PQ5 205 aa7.29□□□□□ -1.24
GAPVD1-202ENST00000297933 CINPQ9BW66 212 aaPredicted RBP7.29□□□□□ -1.24
GAPVD1-202ENST00000297933 GPR63Q9BZJ6 419 aa7.29□□□□□ -1.24
GAPVD1-202ENST00000297933 THG1LQ9NWX6 298 aaKnown RBP7.29□□□□□ -1.24
GAPVD1-202ENST00000297933 PACSIN2Q9UNF0 486 aaPredicted RBP7.29□□□□□ -1.24
GAPVD1-202ENST00000297933 SNX24Q9Y343 169 aa7.29□□□□□ -1.24
GAPVD1-202ENST00000297933 EIF3DO15371 548 aaKnown RBP eCLIP7.29□□□□□ -1.24
GAPVD1-202ENST00000297933 CTIFO43310 598 aaKnown RBP7.29□□□□□ -1.24
GAPVD1-202ENST00000297933 SRGNP10124 158 aa7.29□□□□□ -1.24
GAPVD1-202ENST00000297933 SCP2P22307 547 aa7.29□□□□□ -1.24
GAPVD1-202ENST00000297933 KLRC2P26717 231 aa7.29□□□□□ -1.24
GAPVD1-202ENST00000297933 GUCY1A2P33402 732 aa7.29□□□□□ -1.24
GAPVD1-202ENST00000297933 PPP3CCP48454 512 aa7.29□□□□□ -1.24
GAPVD1-202ENST00000297933 SEMA3FQ13275 785 aa7.29□□□□□ -1.24
GAPVD1-202ENST00000297933 PLD1Q13393 1074 aa7.29□□□□□ -1.24
GAPVD1-202ENST00000297933 PCSK7Q16549 785 aa7.29□□□□□ -1.24
GAPVD1-202ENST00000297933 FSCBQ5H9T9 825 aa7.29□□□□□ -1.24
GAPVD1-202ENST00000297933 RRM2BQ7LG56 351 aa7.29□□□□□ -1.24
GAPVD1-202ENST00000297933 ITIH5Q86UX2 942 aa7.29□□□□□ -1.24
GAPVD1-202ENST00000297933 LRRC37BQ96QE4 947 aa7.29□□□□□ -1.24
GAPVD1-202ENST00000297933 FHDC1Q9C0D6 1143 aaPredicted RBP7.29□□□□□ -1.24
GAPVD1-202ENST00000297933 UNC13BO14795 1591 aa7.28□□□□□ -1.24
GAPVD1-202ENST00000297933 ADM5C9JUS6 153 aa7.28□□□□□ -1.24
GAPVD1-202ENST00000297933 B3GAT3O94766 335 aa7.28□□□□□ -1.24
GAPVD1-202ENST00000297933 ALDH2P05091 517 aa7.28□□□□□ -1.24
GAPVD1-202ENST00000297933 MYL4P12829 197 aa7.28□□□□□ -1.24
GAPVD1-202ENST00000297933 SLC1A1P43005 524 aa7.28□□□□□ -1.24
GAPVD1-202ENST00000297933 RPL10AP62906 217 aaKnown RBP7.28□□□□□ -1.24
GAPVD1-202ENST00000297933 ZNF211Q13398 564 aaPredicted RBP7.28□□□□□ -1.24
GAPVD1-202ENST00000297933 POLD3Q15054 466 aaPredicted RBP7.28□□□□□ -1.24
GAPVD1-202ENST00000297933 PDCD2Q16342 344 aaPredicted RBP7.28□□□□□ -1.24
GAPVD1-202ENST00000297933 DCAF6Q58WW2 860 aa7.28□□□□□ -1.24
GAPVD1-202ENST00000297933 TRIM68Q6AZZ1 485 aa7.28□□□□□ -1.24
GAPVD1-202ENST00000297933 WDR48Q8TAF3 677 aa7.28□□□□□ -1.24
GAPVD1-202ENST00000297933 BCAS4Q8TDM0 211 aa7.28□□□□□ -1.24
GAPVD1-202ENST00000297933 OTUB1Q96FW1 271 aaPredicted RBP7.28□□□□□ -1.24
GAPVD1-202ENST00000297933 AGAP3Q96P47 875 aa7.28□□□□□ -1.24
GAPVD1-202ENST00000297933 NR1H4Q96RI1 486 aaPredicted RBP7.28□□□□□ -1.24
GAPVD1-202ENST00000297933 EML4Q9HC35 981 aaKnown RBP7.28□□□□□ -1.24
GAPVD1-202ENST00000297933 XPNPEP3Q9NQH7 507 aa7.28□□□□□ -1.24
GAPVD1-202ENST00000297933 ABHD10Q9NUJ1 306 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms