RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 SPOPLQ6IQ16 392 aa16.71■□□□□ 0.27
LSM6-201ENST00000296581 SLC20A1Q8WUM9 679 aa16.71■□□□□ 0.27
LSM6-201ENST00000296581 DHX38Q92620 1227 aaKnown RBP16.71■□□□□ 0.27
LSM6-201ENST00000296581 OSMRQ99650 979 aa16.71■□□□□ 0.27
LSM6-201ENST00000296581 THSD7BQ9C0I4 1608 aa16.71■□□□□ 0.26
LSM6-201ENST00000296581 H2AFZP0C0S5 128 aa16.7■□□□□ 0.26
LSM6-201ENST00000296581 FGFR4P22455 802 aa16.7■□□□□ 0.26
LSM6-201ENST00000296581 HNRNPH2P55795 449 aaKnown RBP16.7■□□□□ 0.26
LSM6-201ENST00000296581 NOP14P78316 857 aaKnown RBP16.7■□□□□ 0.26
LSM6-201ENST00000296581 CUL2Q13617 745 aa16.7■□□□□ 0.26
LSM6-201ENST00000296581 DCAF4L1Q3SXM0 396 aa16.7■□□□□ 0.26
LSM6-201ENST00000296581 MAP3K21Q5TCX8 1036 aa16.7■□□□□ 0.26
LSM6-201ENST00000296581 CXCL17Q6UXB2 119 aa16.7■□□□□ 0.26
LSM6-201ENST00000296581 H2AFVQ71UI9 128 aa16.7■□□□□ 0.26
LSM6-201ENST00000296581 ZNF784Q8NCA9 323 aaPredicted RBP16.7■□□□□ 0.26
LSM6-201ENST00000296581 NOX5Q96PH1 765 aa16.7■□□□□ 0.26
LSM6-201ENST00000296581 ADPGKQ9BRR6 497 aa16.7■□□□□ 0.26
LSM6-201ENST00000296581 ASB7Q9H672 318 aa16.7■□□□□ 0.26
LSM6-201ENST00000296581 XPNPEP3Q9NQH7 507 aa16.7■□□□□ 0.26
LSM6-201ENST00000296581 CDC23Q9UJX2 597 aa16.7■□□□□ 0.26
LSM6-201ENST00000296581 CST3P01034 146 aaPredicted RBP16.7■□□□□ 0.26
LSM6-201ENST00000296581 TMEM191BP0C7N4 346 aa16.7■□□□□ 0.26
LSM6-201ENST00000296581 CHRNB2P17787 502 aa16.7■□□□□ 0.26
LSM6-201ENST00000296581 ACO1P21399 889 aaKnown RBP16.7■□□□□ 0.26
LSM6-201ENST00000296581 EIF4BP23588 611 aaKnown RBP16.7■□□□□ 0.26
LSM6-201ENST00000296581 TBXAS1P24557 533 aaPredicted RBP16.7■□□□□ 0.26
LSM6-201ENST00000296581 CST5P28325 142 aaPredicted RBP16.7■□□□□ 0.26
LSM6-201ENST00000296581 TNNT3P45378 269 aaPredicted RBP16.7■□□□□ 0.26
LSM6-201ENST00000296581 VEGFBP49765 207 aa16.7■□□□□ 0.26
LSM6-201ENST00000296581 PAPD7Q5XG87 772 aaKnown RBP16.7■□□□□ 0.26
LSM6-201ENST00000296581 SCARA3Q6AZY7 606 aa16.7■□□□□ 0.26
LSM6-201ENST00000296581 TAF2Q6P1X5 1199 aa16.7■□□□□ 0.26
LSM6-201ENST00000296581 CATSPER4Q7RTX7 472 aa16.7■□□□□ 0.26
LSM6-201ENST00000296581 NOP9Q86U38 636 aaKnown RBP16.7■□□□□ 0.26
LSM6-201ENST00000296581 SLC47A2Q86VL8 602 aa16.7■□□□□ 0.26
LSM6-201ENST00000296581 KLHDC9Q8NEP7 349 aa16.7■□□□□ 0.26
LSM6-201ENST00000296581 ERO1AQ96HE7 468 aa16.7■□□□□ 0.26
LSM6-201ENST00000296581 ALS2CR12Q96Q35 445 aa16.7■□□□□ 0.26
LSM6-201ENST00000296581 GTF2IRD1Q9UHL9 959 aa16.7■□□□□ 0.26
LSM6-201ENST00000296581 GINS2Q9Y248 185 aa16.7■□□□□ 0.26
LSM6-201ENST00000296581 NUB1Q9Y5A7 615 aa16.7■□□□□ 0.26
LSM6-201ENST00000296581 CITO14578 2027 aa16.69■□□□□ 0.26
LSM6-201ENST00000296581 LACTBL1A8MY62 500 aa16.69■□□□□ 0.26
LSM6-201ENST00000296581 GNRH1P01148 92 aa16.69■□□□□ 0.26
LSM6-201ENST00000296581 TNNC2P02585 160 aa16.69■□□□□ 0.26
LSM6-201ENST00000296581 HMGCRP04035 888 aa16.69■□□□□ 0.26
LSM6-201ENST00000296581 CYP11B1P15538 503 aa16.69■□□□□ 0.26
LSM6-201ENST00000296581 GRM5P41594 1212 aa16.69■□□□□ 0.26
LSM6-201ENST00000296581 TFAMQ00059 246 aaKnown RBP16.69■□□□□ 0.26
LSM6-201ENST00000296581 SNX17Q15036 470 aa16.69■□□□□ 0.26
LSM6-201ENST00000296581 NBPF20Q3BBV1 942 aa16.69■□□□□ 0.26
LSM6-201ENST00000296581 SLC10A6Q3KNW5 377 aa16.69■□□□□ 0.26
LSM6-201ENST00000296581 SMYD5Q6GMV2 418 aa16.69■□□□□ 0.26
LSM6-201ENST00000296581 PALB2Q86YC2 1186 aa16.69■□□□□ 0.26
LSM6-201ENST00000296581 RPUSD2Q8IZ73 545 aaKnown RBP16.69■□□□□ 0.26
LSM6-201ENST00000296581 ANKRD36BP1Q96IX9 119 aa16.69■□□□□ 0.26
LSM6-201ENST00000296581 IMPG2Q9BZV3 1241 aa16.69■□□□□ 0.26
LSM6-201ENST00000296581 CNTN6Q9UQ52 1028 aa16.69■□□□□ 0.26
LSM6-201ENST00000296581 RALGAPA2Q2PPJ7 1873 aa16.69■□□□□ 0.26
LSM6-201ENST00000296581 MROH7Q68CQ1 1323 aa16.69■□□□□ 0.26
LSM6-201ENST00000296581 ATP1A1P05023 1023 aaKnown RBP16.68■□□□□ 0.26
LSM6-201ENST00000296581 AXLP30530 894 aa16.68■□□□□ 0.26
LSM6-201ENST00000296581 CRYBB1P53674 252 aaPredicted RBP16.68■□□□□ 0.26
LSM6-201ENST00000296581 SGSM1Q2NKQ1 1148 aa16.68■□□□□ 0.26
LSM6-201ENST00000296581 CCSAPQ6IQ19 270 aaPredicted RBP16.68■□□□□ 0.26
LSM6-201ENST00000296581 APBB1IPQ7Z5R6 666 aaPredicted RBP16.68■□□□□ 0.26
LSM6-201ENST00000296581 JRKLQ9Y4A0 524 aa16.68■□□□□ 0.26
LSM6-201ENST00000296581 A0A0A6YYK5 440 aaPredicted RBP16.68■□□□□ 0.26
LSM6-201ENST00000296581 NFICP08651 508 aa16.68■□□□□ 0.26
LSM6-201ENST00000296581 NOP2P46087 812 aaKnown RBP16.68■□□□□ 0.26
LSM6-201ENST00000296581 GALCP54803 685 aa16.68■□□□□ 0.26
LSM6-201ENST00000296581 MYL6P60660 151 aa16.68■□□□□ 0.26
LSM6-201ENST00000296581 SLC27A1Q6PCB7 646 aa16.68■□□□□ 0.26
LSM6-201ENST00000296581 UBR7Q8N806 425 aa16.68■□□□□ 0.26
LSM6-201ENST00000296581 PXYLP1Q8TE99 480 aa16.68■□□□□ 0.26
LSM6-201ENST00000296581 TMEM40Q8WWA1 233 aa16.68■□□□□ 0.26
LSM6-201ENST00000296581 DDX1Q92499 740 aaKnown RBP16.68■□□□□ 0.26
LSM6-201ENST00000296581 ACAP3Q96P50 834 aa16.68■□□□□ 0.26
LSM6-201ENST00000296581 RSPH14Q9UHP6 348 aa16.68■□□□□ 0.26
LSM6-201ENST00000296581 PCDHGC5Q9Y5F6 944 aa16.68■□□□□ 0.26
LSM6-201ENST00000296581 UMODL1Q5DID0 1318 aa16.67■□□□□ 0.26
LSM6-201ENST00000296581 BUB1O43683 1085 aa16.67■□□□□ 0.26
LSM6-201ENST00000296581 MYCNP04198 464 aaPredicted RBP16.67■□□□□ 0.26
LSM6-201ENST00000296581 TMEM253P0C7T8 217 aa16.67■□□□□ 0.26
LSM6-201ENST00000296581 KRT5P13647 590 aa16.67■□□□□ 0.26
LSM6-201ENST00000296581 PDE6CP51160 858 aa16.67■□□□□ 0.26
LSM6-201ENST00000296581 FMO1Q01740 532 aa16.67■□□□□ 0.26
LSM6-201ENST00000296581 CDR2Q01850 454 aa16.67■□□□□ 0.26
LSM6-201ENST00000296581 NAA30Q147X3 362 aaPredicted RBP16.67■□□□□ 0.26
LSM6-201ENST00000296581 NOTUMQ6P988 496 aa16.67■□□□□ 0.26
LSM6-201ENST00000296581 SESTD1Q86VW0 696 aa16.67■□□□□ 0.26
LSM6-201ENST00000296581 DNAAF5Q86Y56 855 aa16.67■□□□□ 0.26
LSM6-201ENST00000296581 CD302Q8IX05 232 aa16.67■□□□□ 0.26
LSM6-201ENST00000296581 PCDHB18PQ96TA0 734 aa16.67■□□□□ 0.26
LSM6-201ENST00000296581 CARD6Q9BX69 1037 aa16.67■□□□□ 0.26
LSM6-201ENST00000296581 XYLT2Q9H1B5 865 aa16.67■□□□□ 0.26
LSM6-201ENST00000296581 ISCUQ9H1K1 167 aa16.67■□□□□ 0.26
LSM6-201ENST00000296581 ACP6Q9NPH0 428 aa16.67■□□□□ 0.26
LSM6-201ENST00000296581 NCANO14594 1321 aa16.67■□□□□ 0.26
LSM6-201ENST00000296581 ENC1O14682 589 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms