RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 GPBP1Q86WP2 473 aa27.58■■■□□ 2.01
U2AF1-201ENST00000291552 KCNN1Q92952 543 aa27.58■■■□□ 2.01
U2AF1-201ENST00000291552 NXPE3Q969Y0 559 aa27.58■■■□□ 2.01
U2AF1-201ENST00000291552 HCFC1R1Q9NWW0 138 aa27.58■■■□□ 2.01
U2AF1-201ENST00000291552 TUBGCP4Q9UGJ1 667 aa27.58■■■□□ 2.01
U2AF1-201ENST00000291552 NUMBLQ9Y6R0 609 aa27.58■■■□□ 2.01
U2AF1-201ENST00000291552 COL4A3Q01955 1670 aa27.57■■■□□ 2
U2AF1-201ENST00000291552 TBC1D4O60343 1298 aa27.57■■■□□ 2
U2AF1-201ENST00000291552 CXCL8P10145 99 aa27.57■■■□□ 2
U2AF1-201ENST00000291552 SRFP11831 508 aa27.57■■■□□ 2
U2AF1-201ENST00000291552 PLCG1P19174 1290 aa27.57■■■□□ 2
U2AF1-201ENST00000291552 AOC1P19801 751 aa27.57■■■□□ 2
U2AF1-201ENST00000291552 ROR1Q01973 937 aa27.57■■■□□ 2
U2AF1-201ENST00000291552 BRAPQ7Z569 592 aa27.57■■■□□ 2
U2AF1-201ENST00000291552 ITFG1Q8TB96 612 aa27.57■■■□□ 2
U2AF1-201ENST00000291552 ODF2LQ9ULJ1 636 aa27.57■■■□□ 2
U2AF1-201ENST00000291552 ZNF131P52739 623 aa27.56■■■□□ 2
U2AF1-201ENST00000291552 MCM6Q14566 821 aa27.56■■■□□ 2
U2AF1-201ENST00000291552 KARSQ15046 597 aaKnown RBP27.56■■■□□ 2
U2AF1-201ENST00000291552 SF3A1Q15459 793 aaKnown RBP27.56■■■□□ 2
U2AF1-201ENST00000291552 SLC8B1Q6J4K2 584 aa27.56■■■□□ 2
U2AF1-201ENST00000291552 HAUS6Q7Z4H7 955 aa27.56■■■□□ 2
U2AF1-201ENST00000291552 ATOH1Q92858 354 aaPredicted RBP27.56■■■□□ 2
U2AF1-201ENST00000291552 RPP25Q9BUL9 199 aaKnown RBP27.56■■■□□ 2
U2AF1-201ENST00000291552 LARSQ9P2J5 1176 aaKnown RBP27.56■■■□□ 2
U2AF1-201ENST00000291552 WNT16Q9UBV4 365 aa27.56■■■□□ 2
U2AF1-201ENST00000291552 KCNG1Q9UIX4 513 aa27.56■■■□□ 2
U2AF1-201ENST00000291552 CDH7Q9ULB5 785 aa27.56■■■□□ 2
U2AF1-201ENST00000291552 POLIQ9UNA4 740 aa27.56■■■□□ 2
U2AF1-201ENST00000291552 WDR27A2RRH5 827 aa27.55■■■□□ 2
U2AF1-201ENST00000291552 FAM189A1O60320 539 aa27.55■■■□□ 2
U2AF1-201ENST00000291552 XYLBO75191 536 aa27.55■■■□□ 2
U2AF1-201ENST00000291552 RPL9P32969 192 aaKnown RBP27.55■■■□□ 2
U2AF1-201ENST00000291552 UBA7P41226 1012 aa27.55■■■□□ 2
U2AF1-201ENST00000291552 MRPL58Q14197 206 aaKnown RBP27.55■■■□□ 2
U2AF1-201ENST00000291552 DHX8Q14562 1220 aaKnown RBP27.55■■■□□ 2
U2AF1-201ENST00000291552 UVSSAQ2YD98 709 aa27.55■■■□□ 2
U2AF1-201ENST00000291552 ZBTB41Q5SVQ8 909 aa27.55■■■□□ 2
U2AF1-201ENST00000291552 FGF13Q92913 245 aa27.55■■■□□ 2
U2AF1-201ENST00000291552 FGF14Q92915 247 aa27.55■■■□□ 2
U2AF1-201ENST00000291552 CALML4Q96GE6 196 aa27.55■■■□□ 2
U2AF1-201ENST00000291552 DNMT3BQ9UBC3 853 aaKnown RBP27.55■■■□□ 2
U2AF1-201ENST00000291552 RIF1Q5UIP0 2472 aaKnown RBP27.55■■■□□ 2
U2AF1-201ENST00000291552 CLDN3O15551 220 aa27.54■■■□□ 2
U2AF1-201ENST00000291552 BMP15O95972 392 aa27.54■■■□□ 2
U2AF1-201ENST00000291552 LONP1P36776 959 aaKnown RBP27.54■■■□□ 2
U2AF1-201ENST00000291552 TNFSF9P41273 254 aa27.54■■■□□ 2
U2AF1-201ENST00000291552 TSC2P49815 1807 aa27.54■■■□□ 2
U2AF1-201ENST00000291552 SPAG1Q07617 926 aa27.54■■■□□ 2
U2AF1-201ENST00000291552 PARM1Q6UWI2 310 aa27.54■■■□□ 2
U2AF1-201ENST00000291552 GPR152Q8TDT2 470 aa27.54■■■□□ 2
U2AF1-201ENST00000291552 RAD54LQ92698 747 aa27.54■■■□□ 2
U2AF1-201ENST00000291552 SUSD3Q96L08 255 aa27.54■■■□□ 2
U2AF1-201ENST00000291552 FIZ1Q96SL8 496 aa27.54■■■□□ 2
U2AF1-201ENST00000291552 CA14Q9ULX7 337 aa27.54■■■□□ 2
U2AF1-201ENST00000291552 ZFP37Q9Y6Q3 630 aaPredicted RBP27.54■■■□□ 2
U2AF1-201ENST00000291552 TTC26A0AVF1 554 aa27.53■■■□□ 2
U2AF1-201ENST00000291552 VPS37CA5D8V6 355 aaPredicted RBP27.53■■■□□ 2
U2AF1-201ENST00000291552 SYN3O14994 580 aa27.53■■■□□ 2
U2AF1-201ENST00000291552 ABLIM3O94929 683 aa27.53■■■□□ 2
U2AF1-201ENST00000291552 PIGRP01833 764 aa27.53■■■□□ 2
U2AF1-201ENST00000291552 USP49Q70CQ1 688 aa27.53■■■□□ 2
U2AF1-201ENST00000291552 FBXL5Q9UKA1 691 aa27.53■■■□□ 2
U2AF1-201ENST00000291552 MIA3Q5JRA6 1907 aa27.53■■■□□ 2
U2AF1-201ENST00000291552 H0YCG3 227 aa27.52■■■□□ 2
U2AF1-201ENST00000291552 K7ENM7 598 aa27.52■■■□□ 2
U2AF1-201ENST00000291552 CLTAP09496 248 aa27.52■■■□□ 2
U2AF1-201ENST00000291552 PTPAQ15257 358 aa27.52■■■□□ 2
U2AF1-201ENST00000291552 SLC5A9Q2M3M2 681 aa27.52■■■□□ 2
U2AF1-201ENST00000291552 SLC39A4Q6P5W5 647 aa27.52■■■□□ 2
U2AF1-201ENST00000291552 POTEHQ6S545 545 aa27.52■■■□□ 2
U2AF1-201ENST00000291552 NPAS3Q8IXF0 933 aa27.52■■■□□ 2
U2AF1-201ENST00000291552 ZNF461Q8TAF7 563 aa27.52■■■□□ 2
U2AF1-201ENST00000291552 BICD1Q96G01 975 aa27.52■■■□□ 2
U2AF1-201ENST00000291552 IRF2BPLQ9H1B7 796 aa27.52■■■□□ 2
U2AF1-201ENST00000291552 SLC2A4RGQ9NR83 387 aa27.52■■■□□ 2
U2AF1-201ENST00000291552 TBX20Q9UMR3 447 aa27.52■■■□□ 2
U2AF1-201ENST00000291552 NUB1Q9Y5A7 615 aa27.52■■■□□ 2
U2AF1-201ENST00000291552 CLIC4Q9Y696 253 aa27.52■■■□□ 2
U2AF1-201ENST00000291552 CFAP54Q96N23 3096 aa27.52■■■□□ 2
U2AF1-201ENST00000291552 FAM186AA6NE01 2351 aa27.52■■■□□ 2
U2AF1-201ENST00000291552 ARHGEF37A1IGU5 675 aa27.51■■□□□ 1.99
U2AF1-201ENST00000291552 FAM13AO94988 1023 aa27.51■■□□□ 1.99
U2AF1-201ENST00000291552 SEC24AO95486 1093 aa27.51■■□□□ 1.99
U2AF1-201ENST00000291552 ZBTB6Q15916 424 aa27.51■■□□□ 1.99
U2AF1-201ENST00000291552 PABPC1LQ4VXU2 614 aaKnown RBP27.51■■□□□ 1.99
U2AF1-201ENST00000291552 RTL10Q7L3V2 364 aa27.51■■□□□ 1.99
U2AF1-201ENST00000291552 CCDC105Q8IYK2 499 aa27.51■■□□□ 1.99
U2AF1-201ENST00000291552 MYCT1Q8N699 235 aa27.51■■□□□ 1.99
U2AF1-201ENST00000291552 PARVGQ9HBI0 331 aa27.51■■□□□ 1.99
U2AF1-201ENST00000291552 SCN1AP35498 2009 aa27.51■■□□□ 1.99
U2AF1-201ENST00000291552 HNRNPDLO14979 420 aaKnown RBP27.5■■□□□ 1.99
U2AF1-201ENST00000291552 LRPAP1P30533 357 aa27.5■■□□□ 1.99
U2AF1-201ENST00000291552 MCM4P33991 863 aa27.5■■□□□ 1.99
U2AF1-201ENST00000291552 MATR3P43243 847 aaKnown RBP eCLIP27.5■■□□□ 1.99
U2AF1-201ENST00000291552 LIG4P49917 911 aa27.5■■□□□ 1.99
U2AF1-201ENST00000291552 GUCY2FP51841 1108 aa27.5■■□□□ 1.99
U2AF1-201ENST00000291552 ENOX2Q16206 610 aaKnown RBP27.5■■□□□ 1.99
U2AF1-201ENST00000291552 ING5Q8WYH8 240 aa27.5■■□□□ 1.99
U2AF1-201ENST00000291552 DDX12PQ92771 950 aa27.5■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms