RNA–Protein interactions for RNA: ENST00000288022.1

PDF-201, Transcript of peptide deformylase, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDF, Length 1,158 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDF-201ENST00000288022 IGFBP6P24592 240 aaPredicted RBP27.32■■□□□ 1.96
PDF-201ENST00000288022 SMAD4Q13485 552 aaKnown RBP27.32■■□□□ 1.96
PDF-201ENST00000288022 RTP2Q5QGT7 225 aa27.32■■□□□ 1.96
PDF-201ENST00000288022 JADE1Q6IE81 842 aa27.32■■□□□ 1.96
PDF-201ENST00000288022 ANKRD54Q6NXT1 300 aa27.32■■□□□ 1.96
PDF-201ENST00000288022 EPM2AIP1Q7L775 607 aaPredicted RBP27.32■■□□□ 1.96
PDF-201ENST00000288022 NELFCDQ8IXH7 590 aa27.32■■□□□ 1.96
PDF-201ENST00000288022 TSPAN18Q96SJ8 248 aa27.32■■□□□ 1.96
PDF-201ENST00000288022 UHRF1Q96T88 793 aaPredicted RBP27.32■■□□□ 1.96
PDF-201ENST00000288022 CBWD1Q9BRT8 395 aa27.32■■□□□ 1.96
PDF-201ENST00000288022 PCIF1Q9H4Z3 704 aa27.32■■□□□ 1.96
PDF-201ENST00000288022 SPDYE4A6NLX3 237 aa27.31■■□□□ 1.96
PDF-201ENST00000288022 TEX28O15482 410 aa27.31■■□□□ 1.96
PDF-201ENST00000288022 MBTPS2O43462 519 aa27.31■■□□□ 1.96
PDF-201ENST00000288022 KLRC4O43908 158 aa27.31■■□□□ 1.96
PDF-201ENST00000288022 LDHAP00338 332 aaKnown RBP27.31■■□□□ 1.96
PDF-201ENST00000288022 EPCAMP16422 314 aa27.31■■□□□ 1.96
PDF-201ENST00000288022 BRCC3P46736 316 aa27.31■■□□□ 1.96
PDF-201ENST00000288022 CREMQ03060 361 aa27.31■■□□□ 1.96
PDF-201ENST00000288022 KMT5BQ4FZB7 885 aa27.31■■□□□ 1.96
PDF-201ENST00000288022 PRSS55Q6UWB4 352 aaPredicted RBP27.31■■□□□ 1.96
PDF-201ENST00000288022 ZNF507Q8TCN5 953 aa27.31■■□□□ 1.96
PDF-201ENST00000288022 SLC22A17Q8WUG5 538 aa27.31■■□□□ 1.96
PDF-201ENST00000288022 CCDC34Q96HJ3 373 aa27.31■■□□□ 1.96
PDF-201ENST00000288022 NECAB3Q96P71 396 aaPredicted RBP27.31■■□□□ 1.96
PDF-201ENST00000288022 APOL5Q9BWW9 433 aa27.31■■□□□ 1.96
PDF-201ENST00000288022 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP27.31■■□□□ 1.96
PDF-201ENST00000288022 GTF3C5Q9Y5Q8 519 aaPredicted RBP27.31■■□□□ 1.96
PDF-201ENST00000288022 UBE4BO95155 1302 aa27.31■■□□□ 1.96
PDF-201ENST00000288022 GOLGA8IPA6NC78 632 aa27.3■■□□□ 1.96
PDF-201ENST00000288022 GOLGA8JA6NMD2 632 aa27.3■■□□□ 1.96
PDF-201ENST00000288022 I3L4J1 428 aa27.3■■□□□ 1.96
PDF-201ENST00000288022 ADRB2P07550 413 aa27.3■■□□□ 1.96
PDF-201ENST00000288022 HOXD13P35453 343 aa27.3■■□□□ 1.96
PDF-201ENST00000288022 TMEM132DQ14C87 1099 aa27.3■■□□□ 1.96
PDF-201ENST00000288022 CD300LGQ6UXG3 332 aa27.3■■□□□ 1.96
PDF-201ENST00000288022 CRELD2Q6UXH1 353 aaPredicted RBP27.3■■□□□ 1.96
PDF-201ENST00000288022 PDZRN4Q6ZMN7 1036 aaPredicted RBP27.3■■□□□ 1.96
PDF-201ENST00000288022 GLYCTKQ8IVS8 523 aa27.3■■□□□ 1.96
PDF-201ENST00000288022 SMRP1Q8NCR6 262 aa27.3■■□□□ 1.96
PDF-201ENST00000288022 BEST2Q8NFU1 509 aa27.3■■□□□ 1.96
PDF-201ENST00000288022 CCDC47Q96A33 483 aaKnown RBP27.3■■□□□ 1.96
PDF-201ENST00000288022 ASB7Q9H672 318 aa27.3■■□□□ 1.96
PDF-201ENST00000288022 RXFP1Q9HBX9 757 aa27.3■■□□□ 1.96
PDF-201ENST00000288022 CHMP5Q9NZZ3 219 aa27.3■■□□□ 1.96
PDF-201ENST00000288022 XIRP2A4UGR9 3374 aa27.29■■□□□ 1.96
PDF-201ENST00000288022 RPN1P04843 607 aaKnown RBP27.29■■□□□ 1.96
PDF-201ENST00000288022 NFICP08651 508 aa27.29■■□□□ 1.96
PDF-201ENST00000288022 PRR29P0C7W0 189 aa27.29■■□□□ 1.96
PDF-201ENST00000288022 RPL17P18621 184 aaKnown RBP27.29■■□□□ 1.96
PDF-201ENST00000288022 CYP3A5P20815 502 aa27.29■■□□□ 1.96
PDF-201ENST00000288022 MCM4P33991 863 aa27.29■■□□□ 1.96
PDF-201ENST00000288022 CLCN4P51793 760 aa27.29■■□□□ 1.96
PDF-201ENST00000288022 GUCY2FP51841 1108 aa27.29■■□□□ 1.96
PDF-201ENST00000288022 ZBTB6Q15916 424 aa27.29■■□□□ 1.96
PDF-201ENST00000288022 GPR65Q8IYL9 337 aa27.29■■□□□ 1.96
PDF-201ENST00000288022 TMEM130Q8N3G9 435 aa27.29■■□□□ 1.96
PDF-201ENST00000288022 ZSWIM2Q8NEG5 633 aa27.29■■□□□ 1.96
PDF-201ENST00000288022 SCFD1Q8WVM8 642 aa27.29■■□□□ 1.96
PDF-201ENST00000288022 DZANK1Q9NVP4 752 aa27.29■■□□□ 1.96
PDF-201ENST00000288022 DERAQ9Y315 318 aa27.29■■□□□ 1.96
PDF-201ENST00000288022 EXTL3O43909 919 aa27.28■■□□□ 1.96
PDF-201ENST00000288022 IL18RAPO95256 599 aa27.28■■□□□ 1.96
PDF-201ENST00000288022 HOXB8P17481 243 aaPredicted RBP27.28■■□□□ 1.96
PDF-201ENST00000288022 POU5F1Q01860 360 aaKnown RBP27.28■■□□□ 1.96
PDF-201ENST00000288022 PSMD2Q13200 908 aa27.28■■□□□ 1.96
PDF-201ENST00000288022 PSMD5Q16401 504 aa27.28■■□□□ 1.96
PDF-201ENST00000288022 PDXDC1Q6P996 788 aa27.28■■□□□ 1.96
PDF-201ENST00000288022 PIK3R5Q8WYR1 880 aa27.28■■□□□ 1.96
PDF-201ENST00000288022 RBAKQ9NYW8 714 aaPredicted RBP27.28■■□□□ 1.96
PDF-201ENST00000288022 FNIP2Q9P278 1114 aa27.28■■□□□ 1.96
PDF-201ENST00000288022 USP15Q9Y4E8 981 aaPredicted RBP27.28■■□□□ 1.96
PDF-201ENST00000288022 KIAA0391O15091 583 aaKnown RBP27.27■■□□□ 1.96
PDF-201ENST00000288022 GLUD1P00367 558 aa27.27■■□□□ 1.96
PDF-201ENST00000288022 FGFR3P22607 806 aa27.27■■□□□ 1.96
PDF-201ENST00000288022 TKTP29401 623 aaKnown RBP27.27■■□□□ 1.96
PDF-201ENST00000288022 LRPAP1P30533 357 aa27.27■■□□□ 1.96
PDF-201ENST00000288022 SPATA1Q5VX52 437 aa27.27■■□□□ 1.96
PDF-201ENST00000288022 KANK3Q6NY19 840 aa27.27■■□□□ 1.96
PDF-201ENST00000288022 SYCE2Q6PIF2 218 aa27.27■■□□□ 1.96
PDF-201ENST00000288022 HS2ST1Q7LGA3 356 aa27.27■■□□□ 1.96
PDF-201ENST00000288022 PALB2Q86YC2 1186 aa27.27■■□□□ 1.96
PDF-201ENST00000288022 GPD1LQ8N335 351 aa27.27■■□□□ 1.96
PDF-201ENST00000288022 LNX1Q8TBB1 728 aaPredicted RBP27.27■■□□□ 1.96
PDF-201ENST00000288022 FBXL18Q96ME1 805 aa27.27■■□□□ 1.96
PDF-201ENST00000288022 ANK1P16157 1881 aa27.26■■□□□ 1.95
PDF-201ENST00000288022 STK4Q13043 487 aa27.26■■□□□ 1.95
PDF-201ENST00000288022 SMAD2Q15796 467 aaKnown RBP27.26■■□□□ 1.95
PDF-201ENST00000288022 BRSK2Q8IWQ3 736 aa27.26■■□□□ 1.95
PDF-201ENST00000288022 FMR1NBQ8N0W7 255 aaPredicted RBP27.26■■□□□ 1.95
PDF-201ENST00000288022 AGPAT3Q9NRZ7 376 aa27.26■■□□□ 1.95
PDF-201ENST00000288022 HSPBP1Q9NZL4 362 aa27.26■■□□□ 1.95
PDF-201ENST00000288022 C2CD2Q9Y426 696 aa27.26■■□□□ 1.95
PDF-201ENST00000288022 TGFB1I1O43294 461 aa27.25■■□□□ 1.95
PDF-201ENST00000288022 DPYDQ12882 1025 aa27.25■■□□□ 1.95
PDF-201ENST00000288022 BMT2Q1RMZ1 405 aa27.25■■□□□ 1.95
PDF-201ENST00000288022 RARS2Q5T160 578 aaKnown RBP27.25■■□□□ 1.95
PDF-201ENST00000288022 C12orf76Q8N812 135 aaPredicted RBP27.25■■□□□ 1.95
PDF-201ENST00000288022 S1PR5Q9H228 398 aa27.25■■□□□ 1.95
PDF-201ENST00000288022 VWA8A3KMH1 1905 aa27.24■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms