RNA–Protein interactions for RNA: ENST00000287814.4

TIMP4-201, Transcript of TIMP metallopeptidase inhibitor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP4, Length 1,650 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4-201ENST00000287814 KIF20AO95235 890 aa21.55■■□□□ 1.04
TIMP4-201ENST00000287814 IL18RAPO95256 599 aa21.55■■□□□ 1.04
TIMP4-201ENST00000287814 CXCL14O95715 111 aa21.55■■□□□ 1.04
TIMP4-201ENST00000287814 SOD2P04179 222 aa21.55■■□□□ 1.04
TIMP4-201ENST00000287814 CYP3A5P20815 502 aa21.55■■□□□ 1.04
TIMP4-201ENST00000287814 LRPAP1P30533 357 aa21.55■■□□□ 1.04
TIMP4-201ENST00000287814 RPL9P32969 192 aaKnown RBP21.55■■□□□ 1.04
TIMP4-201ENST00000287814 HYAL1Q12794 435 aa21.55■■□□□ 1.04
TIMP4-201ENST00000287814 MORC3Q14149 939 aa21.55■■□□□ 1.04
TIMP4-201ENST00000287814 SNRNP35Q16560 246 aaKnown RBP21.55■■□□□ 1.04
TIMP4-201ENST00000287814 ZCWPW2Q504Y3 356 aa21.55■■□□□ 1.04
TIMP4-201ENST00000287814 COBLL1Q53SF7 1204 aa21.55■■□□□ 1.04
TIMP4-201ENST00000287814 SCARA3Q6AZY7 606 aa21.55■■□□□ 1.04
TIMP4-201ENST00000287814 RBM23Q86U06 439 aaKnown RBP21.55■■□□□ 1.04
TIMP4-201ENST00000287814 SLC9A9Q8IVB4 645 aa21.55■■□□□ 1.04
TIMP4-201ENST00000287814 TMEM174Q8WUU8 243 aa21.55■■□□□ 1.04
TIMP4-201ENST00000287814 TSPAN18Q96SJ8 248 aa21.55■■□□□ 1.04
TIMP4-201ENST00000287814 KIAA1586Q9HCI6 787 aa21.55■■□□□ 1.04
TIMP4-201ENST00000287814 KIAA1468Q9P260 1216 aa21.55■■□□□ 1.04
TIMP4-201ENST00000287814 C2CD2Q9Y426 696 aa21.55■■□□□ 1.04
TIMP4-201ENST00000287814 ANK1P16157 1881 aa21.55■■□□□ 1.04
TIMP4-201ENST00000287814 PDCD11Q14690 1871 aaKnown RBP21.55■■□□□ 1.04
TIMP4-201ENST00000287814 SPTBN5Q9NRC6 3674 aaKnown RBP21.55■■□□□ 1.04
TIMP4-201ENST00000287814 C2orf71A6NGG8 1288 aa21.54■■□□□ 1.04
TIMP4-201ENST00000287814 I3L4J1 428 aa21.54■■□□□ 1.04
TIMP4-201ENST00000287814 PPEF2O14830 753 aa21.54■■□□□ 1.04
TIMP4-201ENST00000287814 LILRB3O75022 631 aa21.54■■□□□ 1.04
TIMP4-201ENST00000287814 NR3C1P04150 777 aa21.54■■□□□ 1.04
TIMP4-201ENST00000287814 CD44P16070 742 aaKnown RBP21.54■■□□□ 1.04
TIMP4-201ENST00000287814 BRCC3P46736 316 aa21.54■■□□□ 1.04
TIMP4-201ENST00000287814 PDE12Q6L8Q7 609 aaKnown RBP21.54■■□□□ 1.04
TIMP4-201ENST00000287814 ADSSL1Q8N142 457 aa21.54■■□□□ 1.04
TIMP4-201ENST00000287814 HERC2P3Q9BVR0 1158 aa21.54■■□□□ 1.04
TIMP4-201ENST00000287814 GZF1Q9H116 711 aaPredicted RBP21.54■■□□□ 1.04
TIMP4-201ENST00000287814 CHST7Q9NS84 486 aa21.54■■□□□ 1.04
TIMP4-201ENST00000287814 PTPRJQ12913 1337 aa21.53■■□□□ 1.04
TIMP4-201ENST00000287814 GOLGA6L22H0YM25 854 aa21.53■■□□□ 1.04
TIMP4-201ENST00000287814 EXOC3O60645 756 aa21.53■■□□□ 1.04
TIMP4-201ENST00000287814 CASP4P49662 377 aa21.53■■□□□ 1.04
TIMP4-201ENST00000287814 SMC1AQ14683 1233 aaKnown RBP21.53■■□□□ 1.04
TIMP4-201ENST00000287814 PTPN14Q15678 1187 aa21.53■■□□□ 1.04
TIMP4-201ENST00000287814 KIAA0319Q5VV43 1072 aa21.53■■□□□ 1.04
TIMP4-201ENST00000287814 BEST2Q8NFU1 509 aa21.53■■□□□ 1.04
TIMP4-201ENST00000287814 SF3B1O75533 1304 aaKnown RBP eCLIP21.53■■□□□ 1.04
TIMP4-201ENST00000287814 C2CD2LO14523 706 aa21.53■■□□□ 1.04
TIMP4-201ENST00000287814 CALUO43852 315 aaPredicted RBP21.53■■□□□ 1.04
TIMP4-201ENST00000287814 NRIP1P48552 1158 aa21.53■■□□□ 1.04
TIMP4-201ENST00000287814 PMS1P54277 932 aaKnown RBP21.53■■□□□ 1.04
TIMP4-201ENST00000287814 LMBRD2Q68DH5 695 aaPredicted RBP21.53■■□□□ 1.04
TIMP4-201ENST00000287814 PLEKHO2Q8TD55 490 aa21.53■■□□□ 1.04
TIMP4-201ENST00000287814 IGFLR1Q9H665 355 aa21.53■■□□□ 1.04
TIMP4-201ENST00000287814 IRAK3Q9Y616 596 aa21.53■■□□□ 1.04
TIMP4-201ENST00000287814 XPOTO43592 962 aaKnown RBP21.52■■□□□ 1.04
TIMP4-201ENST00000287814 TFAMQ00059 246 aaKnown RBP21.52■■□□□ 1.04
TIMP4-201ENST00000287814 CYP24A1Q07973 514 aa21.52■■□□□ 1.04
TIMP4-201ENST00000287814 SKIV2LQ15477 1246 aaKnown RBP21.52■■□□□ 1.04
TIMP4-201ENST00000287814 RTP2Q5QGT7 225 aa21.52■■□□□ 1.04
TIMP4-201ENST00000287814 FAM171A1Q5VUB5 890 aa21.52■■□□□ 1.04
TIMP4-201ENST00000287814 CENPPQ6IPU0 288 aa21.52■■□□□ 1.04
TIMP4-201ENST00000287814 OR5B17Q8NGF7 314 aa21.52■■□□□ 1.04
TIMP4-201ENST00000287814 MFSD14AQ96MC6 490 aa21.52■■□□□ 1.04
TIMP4-201ENST00000287814 POP1Q99575 1024 aaKnown RBP21.52■■□□□ 1.04
TIMP4-201ENST00000287814 TLE6Q9H808 572 aa21.52■■□□□ 1.04
TIMP4-201ENST00000287814 DPP3Q9NY33 737 aa21.52■■□□□ 1.04
TIMP4-201ENST00000287814 STK39Q9UEW8 545 aa21.52■■□□□ 1.04
TIMP4-201ENST00000287814 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.51■■□□□ 1.03
TIMP4-201ENST00000287814 ANO9A1A5B4 782 aa21.51■■□□□ 1.03
TIMP4-201ENST00000287814 PPP1R3GB7ZBB8 358 aa21.51■■□□□ 1.03
TIMP4-201ENST00000287814 PIRO00625 290 aa21.51■■□□□ 1.03
TIMP4-201ENST00000287814 LINC01565O15544 149 aa21.51■■□□□ 1.03
TIMP4-201ENST00000287814 CA8P35219 290 aa21.51■■□□□ 1.03
TIMP4-201ENST00000287814 RBM10P98175 930 aaKnown RBP21.51■■□□□ 1.03
TIMP4-201ENST00000287814 DSG1Q02413 1049 aa21.51■■□□□ 1.03
TIMP4-201ENST00000287814 MYBPC2Q14324 1141 aa21.51■■□□□ 1.03
TIMP4-201ENST00000287814 PSMD6Q15008 389 aa21.51■■□□□ 1.03
TIMP4-201ENST00000287814 NFIL3Q16649 462 aa21.51■■□□□ 1.03
TIMP4-201ENST00000287814 USP41Q3LFD5 358 aa21.51■■□□□ 1.03
TIMP4-201ENST00000287814 C9orf57Q5W0N0 161 aa21.51■■□□□ 1.03
TIMP4-201ENST00000287814 EEF2KMTQ96G04 330 aa21.51■■□□□ 1.03
TIMP4-201ENST00000287814 NR2F2P24468 414 aa21.5■■□□□ 1.03
TIMP4-201ENST00000287814 GLUD2P49448 558 aa21.5■■□□□ 1.03
TIMP4-201ENST00000287814 COL19A1Q14993 1142 aa21.5■■□□□ 1.03
TIMP4-201ENST00000287814 DUSP6Q16828 381 aa21.5■■□□□ 1.03
TIMP4-201ENST00000287814 ANKRD40Q6AI12 368 aa21.5■■□□□ 1.03
TIMP4-201ENST00000287814 CEP57Q86XR8 500 aa21.5■■□□□ 1.03
TIMP4-201ENST00000287814 NT5DC4Q86YG4 428 aa21.5■■□□□ 1.03
TIMP4-201ENST00000287814 C1orf127Q8N9H9 656 aa21.5■■□□□ 1.03
TIMP4-201ENST00000287814 CXorf38Q8TB03 319 aa21.5■■□□□ 1.03
TIMP4-201ENST00000287814 CCDC127Q96BQ5 260 aa21.5■■□□□ 1.03
TIMP4-201ENST00000287814 GTPBP4Q9BZE4 634 aaKnown RBP21.5■■□□□ 1.03
TIMP4-201ENST00000287814 NUP62CLQ9H1M0 184 aa21.5■■□□□ 1.03
TIMP4-201ENST00000287814 MRPL17Q9NRX2 175 aaKnown RBP21.5■■□□□ 1.03
TIMP4-201ENST00000287814 INTS13Q9NVM9 706 aa21.5■■□□□ 1.03
TIMP4-201ENST00000287814 TRIM49BA6NDI0 452 aa21.5■■□□□ 1.03
TIMP4-201ENST00000287814 SPTLC1O15269 473 aa21.5■■□□□ 1.03
TIMP4-201ENST00000287814 AKAP3O75969 853 aa21.5■■□□□ 1.03
TIMP4-201ENST00000287814 URODP06132 367 aa21.5■■□□□ 1.03
TIMP4-201ENST00000287814 CNPP09543 421 aaKnown RBP21.5■■□□□ 1.03
TIMP4-201ENST00000287814 FGFR3P22607 806 aa21.5■■□□□ 1.03
TIMP4-201ENST00000287814 MCM4P33991 863 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms