RNA–Protein interactions for RNA: ENST00000277549.9

CACNA1B-201, Transcript of calcium voltage-gated channel subunit alpha1 B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1B, Length 7,158 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1B-201ENST00000277549 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.39■■□□□ 1.01
CACNA1B-201ENST00000277549 MARCOQ9UEW3 520 aaPredicted RBP21.39■■□□□ 1.01
CACNA1B-201ENST00000277549 PTPRKQ15262 1439 aa21.38■■□□□ 1.01
CACNA1B-201ENST00000277549 KNOP1Q1ED39 458 aaKnown RBP21.38■■□□□ 1.01
CACNA1B-201ENST00000277549 PTPRN2Q92932 1015 aa21.38■■□□□ 1.01
CACNA1B-201ENST00000277549 FAM167BQ9BTA0 163 aa21.38■■□□□ 1.01
CACNA1B-201ENST00000277549 MROH7-TTC4A0A0A0MT08 1334 aa21.38■■□□□ 1.01
CACNA1B-201ENST00000277549 E4F1Q66K89 784 aaPredicted RBP21.38■■□□□ 1.01
CACNA1B-201ENST00000277549 NMRK2Q9NPI5 230 aa21.38■■□□□ 1.01
CACNA1B-201ENST00000277549 GIMAP4Q9NUV9 329 aa21.38■■□□□ 1.01
CACNA1B-201ENST00000277549 MKL2Q9ULH7 1088 aa21.38■■□□□ 1.01
CACNA1B-201ENST00000277549 NPHP4O75161 1426 aaPredicted RBP21.38■■□□□ 1.01
CACNA1B-201ENST00000277549 AKR1B1P15121 316 aa21.38■■□□□ 1.01
CACNA1B-201ENST00000277549 MCEEQ96PE7 176 aa21.38■■□□□ 1.01
CACNA1B-201ENST00000277549 TMEM60Q9H2L4 133 aa21.38■■□□□ 1.01
CACNA1B-201ENST00000277549 SLC39A10Q9ULF5 831 aa21.38■■□□□ 1.01
CACNA1B-201ENST00000277549 MAGOHP61326 146 aaKnown RBP21.38■■□□□ 1.01
CACNA1B-201ENST00000277549 TXNRD1Q16881 649 aa21.38■■□□□ 1.01
CACNA1B-201ENST00000277549 SMTNL2Q2TAL5 461 aa21.38■■□□□ 1.01
CACNA1B-201ENST00000277549 KATNAL1Q9BW62 490 aa21.38■■□□□ 1.01
CACNA1B-201ENST00000277549 CNOT10Q9H9A5 744 aaKnown RBP21.38■■□□□ 1.01
CACNA1B-201ENST00000277549 SFNP31947 248 aa21.38■■□□□ 1.01
CACNA1B-201ENST00000277549 AP1ARQ63HQ0 302 aa21.38■■□□□ 1.01
CACNA1B-201ENST00000277549 TTC13Q8NBP0 860 aa21.38■■□□□ 1.01
CACNA1B-201ENST00000277549 MRFAP1L1Q96HT8 127 aa21.38■■□□□ 1.01
CACNA1B-201ENST00000277549 PAWRQ96IZ0 340 aaKnown RBP21.38■■□□□ 1.01
CACNA1B-201ENST00000277549 KCNB1Q14721 858 aa21.38■■□□□ 1.01
CACNA1B-201ENST00000277549 GOLGA7BQ2TAP0 167 aa21.38■■□□□ 1.01
CACNA1B-201ENST00000277549 STAG2Q8N3U4 1231 aa21.38■■□□□ 1.01
CACNA1B-201ENST00000277549 LAYNQ6UX15 382 aa21.37■■□□□ 1.01
CACNA1B-201ENST00000277549 PHACTR4Q8IZ21 702 aa21.37■■□□□ 1.01
CACNA1B-201ENST00000277549 KPNA1P52294 538 aaPredicted RBP21.37■■□□□ 1.01
CACNA1B-201ENST00000277549 PTPN12Q05209 780 aaKnown RBP21.37■■□□□ 1.01
CACNA1B-201ENST00000277549 DEUP1Q05D60 604 aa21.37■■□□□ 1.01
CACNA1B-201ENST00000277549 PARVAQ9NVD7 372 aa21.37■■□□□ 1.01
CACNA1B-201ENST00000277549 ZC3H11AO75152 810 aaKnown RBP eCLIP21.37■■□□□ 1.01
CACNA1B-201ENST00000277549 ERVK-10P10266 1014 aa21.37■■□□□ 1.01
CACNA1B-201ENST00000277549 MBL2P11226 248 aaPredicted RBP21.37■■□□□ 1.01
CACNA1B-201ENST00000277549 KDSRQ06136 332 aa21.37■■□□□ 1.01
CACNA1B-201ENST00000277549 IYDQ6PHW0 289 aa21.37■■□□□ 1.01
CACNA1B-201ENST00000277549 RRP15Q9Y3B9 282 aaKnown RBP21.37■■□□□ 1.01
CACNA1B-201ENST00000277549 HMGXB3Q12766 1538 aa21.37■■□□□ 1.01
CACNA1B-201ENST00000277549 GH1P01241 217 aa21.37■■□□□ 1.01
CACNA1B-201ENST00000277549 SAMD7Q7Z3H4 446 aa21.37■■□□□ 1.01
CACNA1B-201ENST00000277549 HORMAD1Q86X24 394 aa21.37■■□□□ 1.01
CACNA1B-201ENST00000277549 C20orf96Q9NUD7 363 aaPredicted RBP21.37■■□□□ 1.01
CACNA1B-201ENST00000277549 PPP4R3CPQ6ZMV5 832 aa21.37■■□□□ 1.01
CACNA1B-201ENST00000277549 ZNF556Q9HAH1 456 aa21.37■■□□□ 1.01
CACNA1B-201ENST00000277549 ERVV-1B6SEH8 477 aa21.36■■□□□ 1.01
CACNA1B-201ENST00000277549 RALGDSQ12967 914 aa21.36■■□□□ 1.01
CACNA1B-201ENST00000277549 USP10Q14694 798 aaKnown RBP21.36■■□□□ 1.01
CACNA1B-201ENST00000277549 DCAF6Q58WW2 860 aa21.36■■□□□ 1.01
CACNA1B-201ENST00000277549 IZUMO3Q5VZ72 239 aa21.36■■□□□ 1.01
CACNA1B-201ENST00000277549 EFCAB12Q6NXP0 572 aa21.36■■□□□ 1.01
CACNA1B-201ENST00000277549 ECT2Q9H8V3 914 aa21.36■■□□□ 1.01
CACNA1B-201ENST00000277549 CEP72Q9P209 647 aa21.36■■□□□ 1.01
CACNA1B-201ENST00000277549 RGS12O14924 1447 aa21.36■■□□□ 1.01
CACNA1B-201ENST00000277549 MAST1Q9Y2H9 1570 aa21.36■■□□□ 1.01
CACNA1B-201ENST00000277549 ARID5BQ14865 1188 aa21.36■■□□□ 1.01
CACNA1B-201ENST00000277549 KRT39Q6A163 491 aa21.36■■□□□ 1.01
CACNA1B-201ENST00000277549 KDM5DQ9BY66 1539 aa21.36■■□□□ 1.01
CACNA1B-201ENST00000277549 RALBP11234 206 aa21.36■■□□□ 1.01
CACNA1B-201ENST00000277549 SEZ6Q53EL9 994 aa21.36■■□□□ 1.01
CACNA1B-201ENST00000277549 SHCBP1Q8NEM2 672 aa21.36■■□□□ 1.01
CACNA1B-201ENST00000277549 TASP1Q9H6P5 420 aa21.36■■□□□ 1.01
CACNA1B-201ENST00000277549 CAB39Q9Y376 341 aaPredicted RBP21.36■■□□□ 1.01
CACNA1B-201ENST00000277549 APRTP07741 180 aa21.36■■□□□ 1.01
CACNA1B-201ENST00000277549 RPS7P62081 194 aaKnown RBP21.36■■□□□ 1.01
CACNA1B-201ENST00000277549 CYP4A22Q5TCH4 519 aa21.36■■□□□ 1.01
CACNA1B-201ENST00000277549 APPL1Q9UKG1 709 aa21.36■■□□□ 1.01
CACNA1B-201ENST00000277549 A0A087WUV0 522 aaPredicted RBP21.36■■□□□ 1.01
CACNA1B-201ENST00000277549 KRT4P19013 534 aa21.36■■□□□ 1.01
CACNA1B-201ENST00000277549 MED21Q13503 144 aa21.36■■□□□ 1.01
CACNA1B-201ENST00000277549 FAM129AQ9BZQ8 928 aa21.36■■□□□ 1.01
CACNA1B-201ENST00000277549 NDOR1Q9UHB4 597 aa21.36■■□□□ 1.01
CACNA1B-201ENST00000277549 NCAM1P13591 858 aa21.35■■□□□ 1.01
CACNA1B-201ENST00000277549 GLB1LQ6UWU2 654 aa21.35■■□□□ 1.01
CACNA1B-201ENST00000277549 CLEC4FQ8N1N0 589 aa21.35■■□□□ 1.01
CACNA1B-201ENST00000277549 DIS3LQ8TF46 1054 aaKnown RBP21.35■■□□□ 1.01
CACNA1B-201ENST00000277549 CINPQ9BW66 212 aaPredicted RBP21.35■■□□□ 1.01
CACNA1B-201ENST00000277549 ZFYVE1Q9HBF4 777 aa21.35■■□□□ 1.01
CACNA1B-201ENST00000277549 HDAC6Q9UBN7 1215 aa21.35■■□□□ 1.01
CACNA1B-201ENST00000277549 C3orf70A6NLC5 250 aaPredicted RBP21.35■■□□□ 1.01
CACNA1B-201ENST00000277549 UBE2Q2LH0YL09 131 aa21.35■■□□□ 1.01
CACNA1B-201ENST00000277549 ZFATQ9P243 1243 aa21.35■■□□□ 1.01
CACNA1B-201ENST00000277549 CPDO75976 1380 aa21.35■■□□□ 1.01
CACNA1B-201ENST00000277549 FCGRTP55899 365 aa21.35■■□□□ 1.01
CACNA1B-201ENST00000277549 FGD2Q7Z6J4 655 aa21.35■■□□□ 1.01
CACNA1B-201ENST00000277549 PEG3Q9GZU2 1588 aa21.35■■□□□ 1.01
CACNA1B-201ENST00000277549 HAUS5O94927 633 aa21.35■■□□□ 1.01
CACNA1B-201ENST00000277549 PCDH8O95206 1070 aa21.35■■□□□ 1.01
CACNA1B-201ENST00000277549 PCNAP12004 261 aa21.35■■□□□ 1.01
CACNA1B-201ENST00000277549 STN1Q9H668 368 aaKnown RBP21.35■■□□□ 1.01
CACNA1B-201ENST00000277549 TARSL2A2RTX5 802 aaKnown RBP21.35■■□□□ 1.01
CACNA1B-201ENST00000277549 WEE2P0C1S8 567 aa21.35■■□□□ 1.01
CACNA1B-201ENST00000277549 DDX47Q9H0S4 455 aaKnown RBP21.35■■□□□ 1.01
CACNA1B-201ENST00000277549 SYNGAP1Q96PV0 1343 aa21.35■■□□□ 1.01
CACNA1B-201ENST00000277549 ARFIP2P53365 341 aa21.35■■□□□ 1.01
CACNA1B-201ENST00000277549 ZMYM4Q5VZL5 1548 aa21.34■■□□□ 1.01
CACNA1B-201ENST00000277549 AKAP10O43572 662 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms