RNA–Protein interactions for RNA: ENST00000275233.11

SHPRH-201, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHPRH, Length 6,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-201ENST00000275233 TAF1DQ9H5J8 278 aaPredicted RBP12.5□□□□□ -0.41
SHPRH-201ENST00000275233 LAMC1P11047 1609 aa12.5□□□□□ -0.41
SHPRH-201ENST00000275233 KYAT1Q16773 422 aa12.5□□□□□ -0.41
SHPRH-201ENST00000275233 XKR3Q5GH77 459 aa12.5□□□□□ -0.41
SHPRH-201ENST00000275233 ACSF2Q96CM8 615 aaPredicted RBP12.5□□□□□ -0.41
SHPRH-201ENST00000275233 PRMT1Q99873 361 aaKnown RBP12.5□□□□□ -0.41
SHPRH-201ENST00000275233 TRIM45Q9H8W5 580 aaPredicted RBP12.5□□□□□ -0.41
SHPRH-201ENST00000275233 PCDHGB4Q9UN71 923 aa12.5□□□□□ -0.41
SHPRH-201ENST00000275233 ABCC3O15438 1527 aa12.5□□□□□ -0.41
SHPRH-201ENST00000275233 DDHD2O94830 711 aa12.5□□□□□ -0.41
SHPRH-201ENST00000275233 ORC1Q13415 861 aa12.5□□□□□ -0.41
SHPRH-201ENST00000275233 GOLGA7BQ2TAP0 167 aa12.5□□□□□ -0.41
SHPRH-201ENST00000275233 PKN3Q6P5Z2 889 aa12.5□□□□□ -0.41
SHPRH-201ENST00000275233 SEPT1Q8WYJ6 367 aa12.5□□□□□ -0.41
SHPRH-201ENST00000275233 DPF2Q92785 391 aa12.5□□□□□ -0.41
SHPRH-201ENST00000275233 CAPN10Q9HC96 672 aa12.5□□□□□ -0.41
SHPRH-201ENST00000275233 CHCHD3Q9NX63 227 aaKnown RBP12.5□□□□□ -0.41
SHPRH-201ENST00000275233 XPO7Q9UIA9 1087 aaKnown RBP12.5□□□□□ -0.41
SHPRH-201ENST00000275233 AK9Q5TCS8 1911 aa12.5□□□□□ -0.41
SHPRH-201ENST00000275233 GLI2P10070 1586 aa12.5□□□□□ -0.41
SHPRH-201ENST00000275233 DPEP1P16444 411 aa12.5□□□□□ -0.41
SHPRH-201ENST00000275233 DCAF6Q58WW2 860 aa12.5□□□□□ -0.41
SHPRH-201ENST00000275233 ATF7IP2Q5U623 682 aa12.5□□□□□ -0.41
SHPRH-201ENST00000275233 C11orf74Q86VG3 221 aa12.5□□□□□ -0.41
SHPRH-201ENST00000275233 ZKSCAN4Q969J2 545 aaPredicted RBP12.5□□□□□ -0.41
SHPRH-201ENST00000275233 TRIM51Q9BSJ1 452 aa12.5□□□□□ -0.41
SHPRH-201ENST00000275233 TRIM10Q9UDY6 481 aa12.5□□□□□ -0.41
SHPRH-201ENST00000275233 AP3M2P53677 418 aa12.5□□□□□ -0.41
SHPRH-201ENST00000275233 RBBP8NLQ8NC74 664 aaPredicted RBP12.5□□□□□ -0.41
SHPRH-201ENST00000275233 CHP1Q99653 195 aa12.5□□□□□ -0.41
SHPRH-201ENST00000275233 RAB6BQ9NRW1 208 aa12.5□□□□□ -0.41
SHPRH-201ENST00000275233 APEX2Q9UBZ4 518 aa12.5□□□□□ -0.41
SHPRH-201ENST00000275233 ARIH2O95376 493 aa12.49□□□□□ -0.41
SHPRH-201ENST00000275233 TAP1Q03518 808 aa12.49□□□□□ -0.41
SHPRH-201ENST00000275233 SGO1Q5FBB7 561 aa12.49□□□□□ -0.41
SHPRH-201ENST00000275233 GLRA4Q5JXX5 417 aa12.49□□□□□ -0.41
SHPRH-201ENST00000275233 SARM1Q6SZW1 724 aa12.49□□□□□ -0.41
SHPRH-201ENST00000275233 ANKS3Q6ZW76 656 aa12.49□□□□□ -0.41
SHPRH-201ENST00000275233 METTL16Q86W50 562 aaKnown RBP12.49□□□□□ -0.41
SHPRH-201ENST00000275233 EML4Q9HC35 981 aaKnown RBP12.49□□□□□ -0.41
SHPRH-201ENST00000275233 NR3C2P08235 984 aa12.49□□□□□ -0.41
SHPRH-201ENST00000275233 DEUP1Q05D60 604 aa12.49□□□□□ -0.41
SHPRH-201ENST00000275233 NAA30Q147X3 362 aaPredicted RBP12.49□□□□□ -0.41
SHPRH-201ENST00000275233 GNASQ5JWF2 1037 aa12.49□□□□□ -0.41
SHPRH-201ENST00000275233 SNX31Q8N9S9 440 aa12.49□□□□□ -0.41
SHPRH-201ENST00000275233 BPIFA3Q9BQP9 254 aa12.49□□□□□ -0.41
SHPRH-201ENST00000275233 SNX5Q9Y5X3 404 aa12.49□□□□□ -0.41
SHPRH-201ENST00000275233 ZNF197O14709 1029 aa12.49□□□□□ -0.41
SHPRH-201ENST00000275233 SH3BGRP55822 239 aaPredicted RBP12.49□□□□□ -0.41
SHPRH-201ENST00000275233 SENP2Q9HC62 589 aa12.49□□□□□ -0.41
SHPRH-201ENST00000275233 ABI2Q9NYB9 513 aaPredicted RBP12.49□□□□□ -0.41
SHPRH-201ENST00000275233 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.49□□□□□ -0.41
SHPRH-201ENST00000275233 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.49□□□□□ -0.41
SHPRH-201ENST00000275233 ADGRG1Q9Y653 693 aa12.49□□□□□ -0.41
SHPRH-201ENST00000275233 PNPLA7Q6ZV29 1317 aa12.49□□□□□ -0.41
SHPRH-201ENST00000275233 QRICH2Q9H0J4 1663 aa12.49□□□□□ -0.41
SHPRH-201ENST00000275233 C3orf70A6NLC5 250 aaPredicted RBP12.49□□□□□ -0.41
SHPRH-201ENST00000275233 PJA2O43164 708 aa12.49□□□□□ -0.41
SHPRH-201ENST00000275233 ENO1P06733 434 aaKnown RBP12.49□□□□□ -0.41
SHPRH-201ENST00000275233 TADA2BQ86TJ2 420 aa12.49□□□□□ -0.41
SHPRH-201ENST00000275233 EXOC4Q96A65 974 aa12.49□□□□□ -0.41
SHPRH-201ENST00000275233 CENPKQ9BS16 269 aa12.49□□□□□ -0.41
SHPRH-201ENST00000275233 TRIM62Q9BVG3 475 aa12.49□□□□□ -0.41
SHPRH-201ENST00000275233 SMARCAL1Q9NZC9 954 aa12.49□□□□□ -0.41
SHPRH-201ENST00000275233 DGAT1O75907 488 aa12.49□□□□□ -0.41
SHPRH-201ENST00000275233 FDX1P10109 184 aa12.49□□□□□ -0.41
SHPRH-201ENST00000275233 CYP2C9P11712 490 aa12.49□□□□□ -0.41
SHPRH-201ENST00000275233 CCDC33Q8N5R6 958 aa12.49□□□□□ -0.41
SHPRH-201ENST00000275233 SENP7Q9BQF6 1050 aa12.49□□□□□ -0.41
SHPRH-201ENST00000275233 MARCOQ9UEW3 520 aaPredicted RBP12.49□□□□□ -0.41
SHPRH-201ENST00000275233 PKP3Q9Y446 797 aa12.49□□□□□ -0.41
SHPRH-201ENST00000275233 RSPH10B2B2RC85 870 aa12.48□□□□□ -0.41
SHPRH-201ENST00000275233 SUPT3HB4E1H0 165 aa12.48□□□□□ -0.41
SHPRH-201ENST00000275233 SUPT3HO75486 399 aa12.48□□□□□ -0.41
SHPRH-201ENST00000275233 NDUFS3O75489 264 aa12.48□□□□□ -0.41
SHPRH-201ENST00000275233 RSPH10BP0C881 870 aa12.48□□□□□ -0.41
SHPRH-201ENST00000275233 ARHGEF7Q14155 803 aa12.48□□□□□ -0.41
SHPRH-201ENST00000275233 LONRF1Q17RB8 773 aa12.48□□□□□ -0.41
SHPRH-201ENST00000275233 CRAMP1Q96RY5 1269 aa12.48□□□□□ -0.41
SHPRH-201ENST00000275233 KDM4CQ9H3R0 1056 aa12.48□□□□□ -0.41
SHPRH-201ENST00000275233 LATS2Q9NRM7 1088 aa12.48□□□□□ -0.41
SHPRH-201ENST00000275233 PRG3Q9Y2Y8 225 aaPredicted RBP12.48□□□□□ -0.41
SHPRH-201ENST00000275233 PDHBP11177 359 aa12.48□□□□□ -0.41
SHPRH-201ENST00000275233 ORC2Q13416 577 aaPredicted RBP12.48□□□□□ -0.41
SHPRH-201ENST00000275233 TTC39CQ8N584 583 aa12.48□□□□□ -0.41
SHPRH-201ENST00000275233 IPMKQ8NFU5 416 aa12.48□□□□□ -0.41
SHPRH-201ENST00000275233 APOL5Q9BWW9 433 aa12.48□□□□□ -0.41
SHPRH-201ENST00000275233 METTL5Q9NRN9 209 aaKnown RBP12.48□□□□□ -0.41
SHPRH-201ENST00000275233 ARHGEF38Q9NXL2 777 aa12.48□□□□□ -0.41
SHPRH-201ENST00000275233 DBR1Q9UK59 544 aaKnown RBP12.48□□□□□ -0.41
SHPRH-201ENST00000275233 MYMKA6NI61 221 aa12.48□□□□□ -0.41
SHPRH-201ENST00000275233 KDSRQ06136 332 aa12.48□□□□□ -0.41
SHPRH-201ENST00000275233 C10orf120Q5SQS8 335 aa12.48□□□□□ -0.41
SHPRH-201ENST00000275233 GJB7Q6PEY0 223 aa12.48□□□□□ -0.41
SHPRH-201ENST00000275233 GPRC5AQ8NFJ5 357 aa12.48□□□□□ -0.41
SHPRH-201ENST00000275233 PHF20Q9BVI0 1012 aa12.48□□□□□ -0.41
SHPRH-201ENST00000275233 GPBP1L1Q9HC44 474 aaPredicted RBP12.48□□□□□ -0.41
SHPRH-201ENST00000275233 STX18Q9P2W9 335 aaKnown RBP12.48□□□□□ -0.41
SHPRH-201ENST00000275233 GRID2IPA4D2P6 1211 aa12.48□□□□□ -0.41
SHPRH-201ENST00000275233 GMNCA6NCL1 334 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms