RNA–Protein interactions for RNA: ENST00000273179.9

CTDSPL-201, Transcript of CTD small phosphatase like, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-201ENST00000273179 CNBD1Q8NA66 436 aa9.38□□□□□ -0.91
CTDSPL-201ENST00000273179 SAV1Q9H4B6 383 aaPredicted RBP9.38□□□□□ -0.91
CTDSPL-201ENST00000273179 SEMA3GQ9NS98 782 aa9.38□□□□□ -0.91
CTDSPL-201ENST00000273179 KRIT1O00522 736 aa9.38□□□□□ -0.91
CTDSPL-201ENST00000273179 IL10P22301 178 aa9.38□□□□□ -0.91
CTDSPL-201ENST00000273179 GNG11P61952 73 aa9.38□□□□□ -0.91
CTDSPL-201ENST00000273179 STX5Q13190 355 aa9.38□□□□□ -0.91
CTDSPL-201ENST00000273179 BMPR2Q13873 1038 aa9.38□□□□□ -0.91
CTDSPL-201ENST00000273179 DOC2AQ14183 400 aa9.38□□□□□ -0.91
CTDSPL-201ENST00000273179 PDPK2PQ6A1A2 396 aa9.38□□□□□ -0.91
CTDSPL-201ENST00000273179 CASC4Q6P4E1 433 aa9.38□□□□□ -0.91
CTDSPL-201ENST00000273179 ZNF704Q6ZNC4 412 aaPredicted RBP9.38□□□□□ -0.91
CTDSPL-201ENST00000273179 TAS2R42Q7RTR8 314 aa9.38□□□□□ -0.91
CTDSPL-201ENST00000273179 ANKMY2Q8IV38 441 aa9.38□□□□□ -0.91
CTDSPL-201ENST00000273179 LRRC34Q8IZ02 419 aa9.38□□□□□ -0.91
CTDSPL-201ENST00000273179 ELMOD2Q8IZ81 293 aa9.38□□□□□ -0.91
CTDSPL-201ENST00000273179 ZNF540Q8NDQ6 660 aa9.38□□□□□ -0.91
CTDSPL-201ENST00000273179 CAPSLQ8WWF8 208 aa9.38□□□□□ -0.91
CTDSPL-201ENST00000273179 CCDC138Q96M89 665 aa9.38□□□□□ -0.91
CTDSPL-201ENST00000273179 KIAA1683Q9H0B3 1180 aa9.38□□□□□ -0.91
CTDSPL-201ENST00000273179 THAP1Q9NVV9 213 aa9.38□□□□□ -0.91
CTDSPL-201ENST00000273179 AGAP1Q9UPQ3 857 aa9.38□□□□□ -0.91
CTDSPL-201ENST00000273179 CAB39Q9Y376 341 aaPredicted RBP9.38□□□□□ -0.91
CTDSPL-201ENST00000273179 EDC4Q6P2E9 1401 aaKnown RBP9.38□□□□□ -0.91
CTDSPL-201ENST00000273179 H0YCG3 227 aa9.38□□□□□ -0.91
CTDSPL-201ENST00000273179 CLTBP09497 229 aa9.38□□□□□ -0.91
CTDSPL-201ENST00000273179 PPARGP37231 505 aaPredicted RBP9.38□□□□□ -0.91
CTDSPL-201ENST00000273179 TTC23LQ6PF05 361 aa9.38□□□□□ -0.91
CTDSPL-201ENST00000273179 TOGARAM2Q6ZUX3 1019 aa9.38□□□□□ -0.91
CTDSPL-201ENST00000273179 KRT26Q7Z3Y9 468 aa9.38□□□□□ -0.91
CTDSPL-201ENST00000273179 SRRM1Q8IYB3 904 aaKnown RBP9.38□□□□□ -0.91
CTDSPL-201ENST00000273179 CHMP6Q96FZ7 201 aa9.38□□□□□ -0.91
CTDSPL-201ENST00000273179 C7orf25Q9BPX7 421 aa9.38□□□□□ -0.91
CTDSPL-201ENST00000273179 SIK3Q9Y2K2 1263 aa9.38□□□□□ -0.91
CTDSPL-201ENST00000273179 IPPQ9Y573 584 aa9.38□□□□□ -0.91
CTDSPL-201ENST00000273179 SPATA31D1Q6ZQQ2 1576 aa9.38□□□□□ -0.91
CTDSPL-201ENST00000273179 DCTN3O75935 186 aa9.37□□□□□ -0.91
CTDSPL-201ENST00000273179 MICAL2O94851 1124 aa9.37□□□□□ -0.91
CTDSPL-201ENST00000273179 PRPF6O94906 941 aaKnown RBP9.37□□□□□ -0.91
CTDSPL-201ENST00000273179 NFICP08651 508 aa9.37□□□□□ -0.91
CTDSPL-201ENST00000273179 CCND1P24385 295 aa9.37□□□□□ -0.91
CTDSPL-201ENST00000273179 CTNNB1P35222 781 aa9.37□□□□□ -0.91
CTDSPL-201ENST00000273179 ACADSBP45954 432 aa9.37□□□□□ -0.91
CTDSPL-201ENST00000273179 CAPZA2P47755 286 aa9.37□□□□□ -0.91
CTDSPL-201ENST00000273179 NPTX2P47972 431 aa9.37□□□□□ -0.91
CTDSPL-201ENST00000273179 HSPA13P48723 471 aa9.37□□□□□ -0.91
CTDSPL-201ENST00000273179 INHBCP55103 352 aa9.37□□□□□ -0.91
CTDSPL-201ENST00000273179 MCL1Q07820 350 aa9.37□□□□□ -0.91
CTDSPL-201ENST00000273179 TRAP1Q12931 704 aaKnown RBP9.37□□□□□ -0.91
CTDSPL-201ENST00000273179 DSG2Q14126 1118 aa9.37□□□□□ -0.91
CTDSPL-201ENST00000273179 EFTUD2Q15029 972 aaKnown RBP eCLIP9.37□□□□□ -0.913e-7■□□□□ 11.1
CTDSPL-201ENST00000273179 TMEM95Q3KNT9 176 aa9.37□□□□□ -0.91
CTDSPL-201ENST00000273179 C4orf50Q6ZRC1 276 aa9.37□□□□□ -0.91
CTDSPL-201ENST00000273179 GALNTL5Q7Z4T8 443 aa9.37□□□□□ -0.91
CTDSPL-201ENST00000273179 LSMEM1Q8N8F7 131 aa9.37□□□□□ -0.91
CTDSPL-201ENST00000273179 C3orf58Q8NDZ4 430 aa9.37□□□□□ -0.91
CTDSPL-201ENST00000273179 ASB12Q8WXK4 309 aa9.37□□□□□ -0.91
CTDSPL-201ENST00000273179 TRIM15Q9C019 465 aa9.37□□□□□ -0.91
CTDSPL-201ENST00000273179 SLC38A10Q9HBR0 1119 aa9.37□□□□□ -0.91
CTDSPL-201ENST00000273179 COMMD3-BMI1R4GMX3 469 aa9.37□□□□□ -0.91
CTDSPL-201ENST00000273179 CPS1P31327 1500 aa9.37□□□□□ -0.91
CTDSPL-201ENST00000273179 LACTBL1A8MY62 500 aa9.37□□□□□ -0.91
CTDSPL-201ENST00000273179 F8W8V4 182 aa9.37□□□□□ -0.91
CTDSPL-201ENST00000273179 TXNL1O43396 289 aa9.37□□□□□ -0.91
CTDSPL-201ENST00000273179 HSF2BPO75031 334 aa9.37□□□□□ -0.91
CTDSPL-201ENST00000273179 ECDO95905 644 aaPredicted RBP9.37□□□□□ -0.91
CTDSPL-201ENST00000273179 LINGO3P0C6S8 592 aa9.37□□□□□ -0.91
CTDSPL-201ENST00000273179 MAPK8P45983 427 aa9.37□□□□□ -0.91
CTDSPL-201ENST00000273179 MRPS9P82933 396 aaKnown RBP9.37□□□□□ -0.91
CTDSPL-201ENST00000273179 IFI16Q16666 785 aaKnown RBP9.37□□□□□ -0.91
CTDSPL-201ENST00000273179 FAM26DQ5JW98 314 aa9.37□□□□□ -0.91
CTDSPL-201ENST00000273179 AAGABQ6PD74 315 aa9.37□□□□□ -0.91
CTDSPL-201ENST00000273179 RFPL4BQ6ZWI9 263 aa9.37□□□□□ -0.91
CTDSPL-201ENST00000273179 DHX32Q7L7V1 743 aaKnown RBP9.37□□□□□ -0.91
CTDSPL-201ENST00000273179 TBC1D1Q86TI0 1168 aaPredicted RBP9.37□□□□□ -0.91
CTDSPL-201ENST00000273179 DGKHQ86XP1 1220 aa9.37□□□□□ -0.91
CTDSPL-201ENST00000273179 CNTROBQ8N137 903 aa9.37□□□□□ -0.91
CTDSPL-201ENST00000273179 DNAAF3Q8N9W5 541 aa9.37□□□□□ -0.91
CTDSPL-201ENST00000273179 TSGA13Q96PP4 275 aa9.37□□□□□ -0.91
CTDSPL-201ENST00000273179 APOL6Q9BWW8 343 aa9.37□□□□□ -0.91
CTDSPL-201ENST00000273179 PRDM5Q9NQX1 630 aaPredicted RBP9.37□□□□□ -0.91
CTDSPL-201ENST00000273179 MBIPQ9NS73 344 aa9.37□□□□□ -0.91
CTDSPL-201ENST00000273179 TDRKHQ9Y2W6 561 aaKnown RBP9.37□□□□□ -0.91
CTDSPL-201ENST00000273179 ARL2BPQ9Y2Y0 163 aa9.37□□□□□ -0.91
CTDSPL-201ENST00000273179 A0A1W2PRG0 241 aa9.37□□□□□ -0.91
CTDSPL-201ENST00000273179 XPO1O14980 1071 aaKnown RBP9.37□□□□□ -0.91
CTDSPL-201ENST00000273179 ICMTO60725 284 aa9.37□□□□□ -0.91
CTDSPL-201ENST00000273179 GARTP22102 1010 aa9.37□□□□□ -0.91
CTDSPL-201ENST00000273179 ZAP70P43403 619 aa9.37□□□□□ -0.91
CTDSPL-201ENST00000273179 MRPS25P82663 173 aaKnown RBP9.37□□□□□ -0.91
CTDSPL-201ENST00000273179 TAP1Q03518 808 aa9.37□□□□□ -0.91
CTDSPL-201ENST00000273179 GALNT1Q10472 559 aaPredicted RBP9.37□□□□□ -0.91
CTDSPL-201ENST00000273179 ZNF211Q13398 564 aaPredicted RBP9.37□□□□□ -0.91
CTDSPL-201ENST00000273179 C16orf54Q6UWD8 224 aa9.37□□□□□ -0.91
CTDSPL-201ENST00000273179 ENOSF1Q7L5Y1 443 aa9.37□□□□□ -0.91
CTDSPL-201ENST00000273179 IFT20Q8IY31 132 aa9.37□□□□□ -0.91
CTDSPL-201ENST00000273179 SPICE1Q8N0Z3 855 aa9.37□□□□□ -0.91
CTDSPL-201ENST00000273179 NATD1Q8N6N6 113 aa9.37□□□□□ -0.91
CTDSPL-201ENST00000273179 NAT8LQ8N9F0 302 aa9.37□□□□□ -0.91
CTDSPL-201ENST00000273179 RNF34Q969K3 372 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms