RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 CYP1A2P05177 515 aa17.88■□□□□ 0.45
SQLE-201ENST00000265896 SUPT20HQ8NEM7 779 aa17.88■□□□□ 0.45
SQLE-201ENST00000265896 ZNF516Q92618 1163 aa17.88■□□□□ 0.45
SQLE-201ENST00000265896 RBM15Q96T37 977 aaKnown RBP eCLIP17.88■□□□□ 0.451e-6■■□□□ 12.4
SQLE-201ENST00000265896 TMOD2Q9NZR1 351 aa17.88■□□□□ 0.45
SQLE-201ENST00000265896 CNOT7Q9UIV1 285 aaKnown RBP17.88■□□□□ 0.45
SQLE-201ENST00000265896 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.88■□□□□ 0.45
SQLE-201ENST00000265896 PTPRJQ12913 1337 aa17.87■□□□□ 0.45
SQLE-201ENST00000265896 SRRM3A6NNA2 597 aaPredicted RBP17.87■□□□□ 0.45
SQLE-201ENST00000265896 SUN1O94901 812 aa17.87■□□□□ 0.45
SQLE-201ENST00000265896 KRT15P19012 456 aa17.87■□□□□ 0.45
SQLE-201ENST00000265896 TMEM63BQ5T3F8 832 aa17.87■□□□□ 0.45
SQLE-201ENST00000265896 SLC9A9Q8IVB4 645 aa17.87■□□□□ 0.45
SQLE-201ENST00000265896 ANKLE1Q8NAG6 615 aa17.87■□□□□ 0.45
SQLE-201ENST00000265896 TMEM161BQ8NDZ6 487 aa17.87■□□□□ 0.45
SQLE-201ENST00000265896 PITPNM3Q9BZ71 974 aa17.87■□□□□ 0.45
SQLE-201ENST00000265896 DCLK3Q9C098 648 aa17.87■□□□□ 0.45
SQLE-201ENST00000265896 RANBP17Q9H2T7 1088 aaKnown RBP17.87■□□□□ 0.45
SQLE-201ENST00000265896 VPS37BQ9H9H4 285 aa17.87■□□□□ 0.45
SQLE-201ENST00000265896 AGO4Q9HCK5 861 aaKnown RBP17.87■□□□□ 0.45
SQLE-201ENST00000265896 EFTUD2Q15029 972 aaKnown RBP eCLIP17.87■□□□□ 0.459e-8■■□□□ 13.6
SQLE-201ENST00000265896 ECHDC2Q86YB7 292 aa17.87■□□□□ 0.45
SQLE-201ENST00000265896 C3orf20Q8ND61 904 aa17.87■□□□□ 0.45
SQLE-201ENST00000265896 ZNF277Q9NRM2 450 aaPredicted RBP17.87■□□□□ 0.45
SQLE-201ENST00000265896 GABBR1Q9UBS5 961 aa17.87■□□□□ 0.45
SQLE-201ENST00000265896 HAO1Q9UJM8 370 aa17.87■□□□□ 0.45
SQLE-201ENST00000265896 ZNF148Q9UQR1 794 aa17.87■□□□□ 0.45
SQLE-201ENST00000265896 NSFP46459 744 aaKnown RBP17.86■□□□□ 0.45
SQLE-201ENST00000265896 OVGP1Q12889 678 aa17.86■□□□□ 0.45
SQLE-201ENST00000265896 PRAMEF18Q5VWM3 479 aa17.86■□□□□ 0.45
SQLE-201ENST00000265896 TMEM143Q96AN5 459 aa17.86■□□□□ 0.45
SQLE-201ENST00000265896 SERPINA10Q9UK55 444 aa17.86■□□□□ 0.45
SQLE-201ENST00000265896 DNPEPQ9ULA0 475 aa17.86■□□□□ 0.45
SQLE-201ENST00000265896 A0A1W2PPM1 405 aa17.86■□□□□ 0.45
SQLE-201ENST00000265896 WDR4P57081 412 aaKnown RBP17.86■□□□□ 0.45
SQLE-201ENST00000265896 DMP1Q13316 513 aaPredicted RBP17.86■□□□□ 0.45
SQLE-201ENST00000265896 CLEC16AQ2KHT3 1053 aa17.86■□□□□ 0.45
SQLE-201ENST00000265896 SMTNL2Q2TAL5 461 aa17.86■□□□□ 0.45
SQLE-201ENST00000265896 WLSQ5T9L3 541 aa17.86■□□□□ 0.45
SQLE-201ENST00000265896 MIS18BP1Q6P0N0 1132 aa17.86■□□□□ 0.45
SQLE-201ENST00000265896 MCOLN2Q8IZK6 566 aa17.86■□□□□ 0.45
SQLE-201ENST00000265896 ERP27Q96DN0 273 aa17.86■□□□□ 0.45
SQLE-201ENST00000265896 RMDN3Q96TC7 470 aa17.86■□□□□ 0.45
SQLE-201ENST00000265896 LRRC19Q9H756 370 aa17.86■□□□□ 0.45
SQLE-201ENST00000265896 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.86■□□□□ 0.45
SQLE-201ENST00000265896 NKIRAS1Q9NYS0 192 aa17.86■□□□□ 0.45
SQLE-201ENST00000265896 STK24Q9Y6E0 443 aa17.86■□□□□ 0.45
SQLE-201ENST00000265896 ZNF536O15090 1300 aa17.86■□□□□ 0.45
SQLE-201ENST00000265896 CBX6O95503 412 aa17.85■□□□□ 0.45
SQLE-201ENST00000265896 GAS8O95995 478 aa17.85■□□□□ 0.45
SQLE-201ENST00000265896 GZMAP12544 262 aa17.85■□□□□ 0.45
SQLE-201ENST00000265896 COPS2P61201 443 aa17.85■□□□□ 0.45
SQLE-201ENST00000265896 ORC1Q13415 861 aa17.85■□□□□ 0.45
SQLE-201ENST00000265896 ITIH4Q14624 930 aa17.85■□□□□ 0.45
SQLE-201ENST00000265896 DLGAP5Q15398 846 aa17.85■□□□□ 0.45
SQLE-201ENST00000265896 PKN2Q16513 984 aaKnown RBP17.85■□□□□ 0.45
SQLE-201ENST00000265896 SWSAP1Q6NVH7 229 aa17.85■□□□□ 0.45
SQLE-201ENST00000265896 B3GNT9Q6UX72 402 aa17.85■□□□□ 0.45
SQLE-201ENST00000265896 LRRN4Q8WUT4 740 aa17.85■□□□□ 0.45
SQLE-201ENST00000265896 DCTN4Q9UJW0 460 aa17.85■□□□□ 0.45
SQLE-201ENST00000265896 RIPK3Q9Y572 518 aa17.85■□□□□ 0.45
SQLE-201ENST00000265896 ATAD5Q96QE3 1844 aa17.85■□□□□ 0.45
SQLE-201ENST00000265896 SIPA1L1O43166 1804 aa17.85■□□□□ 0.45
SQLE-201ENST00000265896 EXOC1LA0A1B0GW35 172 aa17.85■□□□□ 0.45
SQLE-201ENST00000265896 FSCN2O14926 492 aa17.85■□□□□ 0.45
SQLE-201ENST00000265896 FDX1P10109 184 aa17.85■□□□□ 0.45
SQLE-201ENST00000265896 GHRP10912 638 aa17.85■□□□□ 0.45
SQLE-201ENST00000265896 HSPA6P17066 643 aa17.85■□□□□ 0.45
SQLE-201ENST00000265896 CAP2P40123 477 aa17.85■□□□□ 0.45
SQLE-201ENST00000265896 NLRP11P59045 1033 aaKnown RBP17.85■□□□□ 0.45
SQLE-201ENST00000265896 GTF2BQ00403 316 aa17.85■□□□□ 0.45
SQLE-201ENST00000265896 RUNDC3BQ96NL0 473 aa17.85■□□□□ 0.45
SQLE-201ENST00000265896 ZNF70Q9UC06 446 aaPredicted RBP17.85■□□□□ 0.45
SQLE-201ENST00000265896 GRID1Q9ULK0 1009 aa17.85■□□□□ 0.45
SQLE-201ENST00000265896 SLC26A4O43511 780 aa17.85■□□□□ 0.45
SQLE-201ENST00000265896 NEBLO76041 1014 aa17.85■□□□□ 0.45
SQLE-201ENST00000265896 NFIL3Q16649 462 aa17.85■□□□□ 0.45
SQLE-201ENST00000265896 CYP1B1Q16678 543 aa17.85■□□□□ 0.45
SQLE-201ENST00000265896 MTERF2Q49AM1 385 aa17.85■□□□□ 0.45
SQLE-201ENST00000265896 KCNT1Q5JUK3 1230 aa17.85■□□□□ 0.45
SQLE-201ENST00000265896 VSIG1Q86XK7 387 aa17.85■□□□□ 0.45
SQLE-201ENST00000265896 DDX27Q96GQ7 796 aaKnown RBP17.85■□□□□ 0.45
SQLE-201ENST00000265896 ADAM22Q9P0K1 906 aa17.85■□□□□ 0.45
SQLE-201ENST00000265896 SEPT9Q9UHD8 586 aaPredicted RBP17.85■□□□□ 0.45
SQLE-201ENST00000265896 PCDHB4Q9Y5E5 795 aa17.85■□□□□ 0.45
SQLE-201ENST00000265896 TAF1LQ8IZX4 1826 aa17.84■□□□□ 0.45
SQLE-201ENST00000265896 H0YIN7 160 aa17.84■□□□□ 0.45
SQLE-201ENST00000265896 ZNF862O60290 1169 aa17.84■□□□□ 0.45
SQLE-201ENST00000265896 PEX19P40855 299 aa17.84■□□□□ 0.45
SQLE-201ENST00000265896 SYTL5Q8TDW5 730 aaPredicted RBP17.84■□□□□ 0.45
SQLE-201ENST00000265896 KIFAP3Q92845 792 aa17.84■□□□□ 0.45
SQLE-201ENST00000265896 TMEM121Q9BTD3 319 aa17.84■□□□□ 0.45
SQLE-201ENST00000265896 OSBPL8Q9BZF1 889 aa17.84■□□□□ 0.45
SQLE-201ENST00000265896 C1orf112Q9NSG2 853 aa17.84■□□□□ 0.45
SQLE-201ENST00000265896 ZMYND8Q9ULU4 1186 aaPredicted RBP17.84■□□□□ 0.45
SQLE-201ENST00000265896 TLR3O15455 904 aaKnown RBP17.84■□□□□ 0.45
SQLE-201ENST00000265896 SESN3P58005 492 aa17.84■□□□□ 0.45
SQLE-201ENST00000265896 GPS1Q13098 491 aa17.84■□□□□ 0.45
SQLE-201ENST00000265896 PCNX4Q63HM2 1172 aa17.84■□□□□ 0.45
SQLE-201ENST00000265896 RHBDF2Q6PJF5 856 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms