RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 ORC1Q13415 861 aa15.39■□□□□ 0.05
PDLIM2-201ENST00000265810 GPAT2Q6NUI2 795 aa15.39■□□□□ 0.05
PDLIM2-201ENST00000265810 CAPNS2Q96L46 248 aa15.39■□□□□ 0.05
PDLIM2-201ENST00000265810 NRCAMQ92823 1304 aa15.39■□□□□ 0.05
PDLIM2-201ENST00000265810 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.39■□□□□ 0.05
PDLIM2-201ENST00000265810 AMHR2Q16671 573 aa15.39■□□□□ 0.05
PDLIM2-201ENST00000265810 WDR49Q8IV35 697 aa15.39■□□□□ 0.05
PDLIM2-201ENST00000265810 MAF1Q9H063 256 aa15.39■□□□□ 0.05
PDLIM2-201ENST00000265810 ASNSD1Q9NWL6 643 aa15.39■□□□□ 0.05
PDLIM2-201ENST00000265810 F8VZ95 297 aa15.39■□□□□ 0.05
PDLIM2-201ENST00000265810 REXO1L1PQ8IX06 675 aa15.39■□□□□ 0.05
PDLIM2-201ENST00000265810 UHMK1Q8TAS1 419 aaKnown RBP15.39■□□□□ 0.05
PDLIM2-201ENST00000265810 TSNARE1Q96NA8 513 aa15.39■□□□□ 0.05
PDLIM2-201ENST00000265810 COMMD10Q9Y6G5 202 aa15.39■□□□□ 0.05
PDLIM2-201ENST00000265810 KRT3P12035 628 aa15.38■□□□□ 0.05
PDLIM2-201ENST00000265810 TRIP13Q15645 432 aaPredicted RBP15.38■□□□□ 0.05
PDLIM2-201ENST00000265810 CCNYQ8ND76 341 aa15.38■□□□□ 0.05
PDLIM2-201ENST00000265810 MICAL1Q8TDZ2 1067 aa15.38■□□□□ 0.05
PDLIM2-201ENST00000265810 GOLPH3Q9H4A6 298 aa15.38■□□□□ 0.05
PDLIM2-201ENST00000265810 DUSP10Q9Y6W6 482 aa15.38■□□□□ 0.05
PDLIM2-201ENST00000265810 MYH7P12883 1935 aa15.38■□□□□ 0.05
PDLIM2-201ENST00000265810 ECEL1O95672 775 aa15.38■□□□□ 0.05
PDLIM2-201ENST00000265810 SMIM10L2AP0DMW4 78 aa15.38■□□□□ 0.05
PDLIM2-201ENST00000265810 SMIM10L2BP0DMW5 78 aa15.38■□□□□ 0.05
PDLIM2-201ENST00000265810 LCP1P13796 627 aa15.38■□□□□ 0.05
PDLIM2-201ENST00000265810 PRKAR2AP13861 404 aaKnown RBP15.38■□□□□ 0.05
PDLIM2-201ENST00000265810 GTF2F1P35269 517 aaKnown RBP eCLIP15.38■□□□□ 0.05
PDLIM2-201ENST00000265810 PLTPP55058 493 aa15.38■□□□□ 0.05
PDLIM2-201ENST00000265810 PPP3CAQ08209 521 aa15.38■□□□□ 0.05
PDLIM2-201ENST00000265810 EP400NLQ6ZTU2 488 aa15.38■□□□□ 0.05
PDLIM2-201ENST00000265810 TMEM134Q9H6X4 195 aa15.38■□□□□ 0.05
PDLIM2-201ENST00000265810 IP6K2Q9UHH9 426 aa15.38■□□□□ 0.05
PDLIM2-201ENST00000265810 LRP5O75197 1615 aa15.38■□□□□ 0.05
PDLIM2-201ENST00000265810 LRRIQ3A6PVS8 624 aaPredicted RBP15.38■□□□□ 0.05
PDLIM2-201ENST00000265810 TADA2AO75478 443 aa15.38■□□□□ 0.05
PDLIM2-201ENST00000265810 MCF2P10911 925 aa15.38■□□□□ 0.05
PDLIM2-201ENST00000265810 AKAP5P24588 427 aa15.38■□□□□ 0.05
PDLIM2-201ENST00000265810 ATP11AP98196 1134 aa15.38■□□□□ 0.05
PDLIM2-201ENST00000265810 LMNB2Q03252 620 aa15.38■□□□□ 0.05
PDLIM2-201ENST00000265810 TBX2Q13207 712 aaPredicted RBP15.38■□□□□ 0.05
PDLIM2-201ENST00000265810 NAA30Q147X3 362 aaPredicted RBP15.38■□□□□ 0.05
PDLIM2-201ENST00000265810 CCDC14Q49A88 953 aa15.38■□□□□ 0.05
PDLIM2-201ENST00000265810 CCDC91Q7Z6B0 441 aa15.38■□□□□ 0.05
PDLIM2-201ENST00000265810 PPTC7Q8NI37 304 aa15.38■□□□□ 0.05
PDLIM2-201ENST00000265810 BCAS3Q9H6U6 928 aa15.38■□□□□ 0.05
PDLIM2-201ENST00000265810 VPS37BQ9H9H4 285 aa15.38■□□□□ 0.05
PDLIM2-201ENST00000265810 MYH1P12882 1939 aa15.38■□□□□ 0.05
PDLIM2-201ENST00000265810 DDX60Q8IY21 1712 aaKnown RBP15.38■□□□□ 0.05
PDLIM2-201ENST00000265810 CCDC66A2RUB6 948 aa15.38■□□□□ 0.05
PDLIM2-201ENST00000265810 GHRP10912 638 aa15.38■□□□□ 0.05
PDLIM2-201ENST00000265810 CTNNA1P35221 906 aaKnown RBP15.38■□□□□ 0.05
PDLIM2-201ENST00000265810 TAF6P49848 677 aa15.38■□□□□ 0.05
PDLIM2-201ENST00000265810 MAP3K10Q02779 954 aa15.38■□□□□ 0.05
PDLIM2-201ENST00000265810 MIIPQ5JXC2 388 aa15.38■□□□□ 0.05
PDLIM2-201ENST00000265810 CAPN12Q6ZSI9 719 aa15.38■□□□□ 0.05
PDLIM2-201ENST00000265810 ZNF410Q86VK4 478 aa15.38■□□□□ 0.05
PDLIM2-201ENST00000265810 CD302Q8IX05 232 aa15.38■□□□□ 0.05
PDLIM2-201ENST00000265810 ARFGAP2Q8N6H7 521 aa15.38■□□□□ 0.05
PDLIM2-201ENST00000265810 PPP1R14CQ8TAE6 165 aa15.38■□□□□ 0.05
PDLIM2-201ENST00000265810 OGFRQ9NZT2 677 aa15.38■□□□□ 0.05
PDLIM2-201ENST00000265810 MCF2LO15068 1137 aa15.37■□□□□ 0.05
PDLIM2-201ENST00000265810 ZC3H11AO75152 810 aaKnown RBP eCLIP15.37■□□□□ 0.05
PDLIM2-201ENST00000265810 ELNP15502 786 aa15.37■□□□□ 0.05
PDLIM2-201ENST00000265810 SPIRE1Q08AE8 756 aa15.37■□□□□ 0.05
PDLIM2-201ENST00000265810 KRT71Q3SY84 523 aa15.37■□□□□ 0.05
PDLIM2-201ENST00000265810 SV2CQ496J9 727 aa15.37■□□□□ 0.05
PDLIM2-201ENST00000265810 IRF2BP1Q8IU81 584 aa15.37■□□□□ 0.05
PDLIM2-201ENST00000265810 UBA3Q8TBC4 463 aa15.37■□□□□ 0.05
PDLIM2-201ENST00000265810 RNPEPQ9H4A4 650 aa15.37■□□□□ 0.05
PDLIM2-201ENST00000265810 WRAP73Q9P2S5 460 aaPredicted RBP15.37■□□□□ 0.05
PDLIM2-201ENST00000265810 PRG3Q9Y2Y8 225 aaPredicted RBP15.37■□□□□ 0.05
PDLIM2-201ENST00000265810 COL2A1P02458 1487 aaPredicted RBP15.37■□□□□ 0.05
PDLIM2-201ENST00000265810 ZNF185O15231 689 aa15.37■□□□□ 0.05
PDLIM2-201ENST00000265810 TRAPPC3O43617 180 aa15.37■□□□□ 0.05
PDLIM2-201ENST00000265810 TLR2O60603 784 aa15.37■□□□□ 0.05
PDLIM2-201ENST00000265810 B3GAT3O94766 335 aa15.37■□□□□ 0.05
PDLIM2-201ENST00000265810 SEC31AO94979 1220 aaKnown RBP15.37■□□□□ 0.05
PDLIM2-201ENST00000265810 MMEP08473 750 aa15.37■□□□□ 0.05
PDLIM2-201ENST00000265810 MAN1A1P33908 653 aa15.37■□□□□ 0.05
PDLIM2-201ENST00000265810 OR1G1P47890 313 aa15.37■□□□□ 0.05
PDLIM2-201ENST00000265810 MTMR3Q13615 1198 aa15.37■□□□□ 0.05
PDLIM2-201ENST00000265810 DENND2CQ68D51 928 aa15.37■□□□□ 0.05
PDLIM2-201ENST00000265810 ZNF571Q7Z3V5 609 aaPredicted RBP15.37■□□□□ 0.05
PDLIM2-201ENST00000265810 BRSK2Q8IWQ3 736 aa15.37■□□□□ 0.05
PDLIM2-201ENST00000265810 FAM76AQ8TAV0 307 aa15.37■□□□□ 0.05
PDLIM2-201ENST00000265810 SYNGAP1Q96PV0 1343 aa15.37■□□□□ 0.05
PDLIM2-201ENST00000265810 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.37■□□□□ 0.05
PDLIM2-201ENST00000265810 ADRB2P07550 413 aa15.37■□□□□ 0.05
PDLIM2-201ENST00000265810 CPB1P15086 417 aa15.37■□□□□ 0.05
PDLIM2-201ENST00000265810 CYP11B1P15538 503 aa15.37■□□□□ 0.05
PDLIM2-201ENST00000265810 C2CD6Q53TS8 623 aa15.37■□□□□ 0.05
PDLIM2-201ENST00000265810 SLC27A1Q6PCB7 646 aa15.37■□□□□ 0.05
PDLIM2-201ENST00000265810 MTHFD1LQ6UB35 978 aa15.37■□□□□ 0.05
PDLIM2-201ENST00000265810 DNAAF5Q86Y56 855 aa15.37■□□□□ 0.05
PDLIM2-201ENST00000265810 LACRTQ9GZZ8 138 aa15.37■□□□□ 0.05
PDLIM2-201ENST00000265810 PPANQ9NQ55 473 aaKnown RBP15.37■□□□□ 0.05
PDLIM2-201ENST00000265810 GNL1P36915 607 aaPredicted RBP15.36■□□□□ 0.05
PDLIM2-201ENST00000265810 NCKAP1LP55160 1127 aa15.36■□□□□ 0.05
PDLIM2-201ENST00000265810 PSMD6Q15008 389 aa15.36■□□□□ 0.05
PDLIM2-201ENST00000265810 BMT2Q1RMZ1 405 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms