RNA–Protein interactions for RNA: ENST00000265735.11

SGCE-201, Transcript of sarcoglycan epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCE, Length 1,694 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-201ENST00000265735 MARCH5Q9NX47 278 aa13.74□□□□□ -0.21
SGCE-201ENST00000265735 STYXL1Q9Y6J8 313 aa13.74□□□□□ -0.21
SGCE-201ENST00000265735 PDCD11Q14690 1871 aaKnown RBP13.74□□□□□ -0.21
SGCE-201ENST00000265735 UNC80Q8N2C7 3258 aa13.74□□□□□ -0.21
SGCE-201ENST00000265735 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.73□□□□□ -0.21
SGCE-201ENST00000265735 A0A0B4J269 797 aa13.73□□□□□ -0.21
SGCE-201ENST00000265735 TRIM49BA6NDI0 452 aa13.73□□□□□ -0.21
SGCE-201ENST00000265735 HNRNPDLO14979 420 aaKnown RBP13.73□□□□□ -0.21
SGCE-201ENST00000265735 MEFVO15553 781 aaPredicted RBP13.73□□□□□ -0.21
SGCE-201ENST00000265735 THP07101 528 aa13.73□□□□□ -0.21
SGCE-201ENST00000265735 TPM2P07951 284 aa13.73□□□□□ -0.21
SGCE-201ENST00000265735 LIG4P49917 911 aa13.73□□□□□ -0.21
SGCE-201ENST00000265735 CASP5P51878 434 aa13.73□□□□□ -0.21
SGCE-201ENST00000265735 COPB1P53618 953 aaKnown RBP13.73□□□□□ -0.21
SGCE-201ENST00000265735 HYAL1Q12794 435 aa13.73□□□□□ -0.21
SGCE-201ENST00000265735 COASYQ13057 564 aa13.73□□□□□ -0.21
SGCE-201ENST00000265735 TUSC3Q13454 348 aa13.73□□□□□ -0.21
SGCE-201ENST00000265735 ALCAMQ13740 583 aa13.73□□□□□ -0.21
SGCE-201ENST00000265735 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.73□□□□□ -0.21
SGCE-201ENST00000265735 RNF168Q8IYW5 571 aaPredicted RBP13.73□□□□□ -0.21
SGCE-201ENST00000265735 CSGALNACT2Q8N6G5 542 aa13.73□□□□□ -0.21
SGCE-201ENST00000265735 KIAA0895Q8NCT3 520 aa13.73□□□□□ -0.21
SGCE-201ENST00000265735 BICD1Q96G01 975 aa13.73□□□□□ -0.21
SGCE-201ENST00000265735 ACAP3Q96P50 834 aa13.73□□□□□ -0.21
SGCE-201ENST00000265735 PPP1R10Q96QC0 940 aaKnown RBP13.73□□□□□ -0.21
SGCE-201ENST00000265735 VN1R3Q9BXE9 311 aa13.73□□□□□ -0.21
SGCE-201ENST00000265735 SRRTQ9BXP5 876 aaKnown RBP13.73□□□□□ -0.21
SGCE-201ENST00000265735 FGFBP2Q9BYJ0 223 aa13.73□□□□□ -0.21
SGCE-201ENST00000265735 SLC39A2Q9NP94 309 aa13.73□□□□□ -0.21
SGCE-201ENST00000265735 TOPORSQ9NS56 1045 aaPredicted RBP13.73□□□□□ -0.21
SGCE-201ENST00000265735 TBC1D7Q9P0N9 293 aa13.73□□□□□ -0.21
SGCE-201ENST00000265735 ANKFY1Q9P2R3 1169 aa13.73□□□□□ -0.21
SGCE-201ENST00000265735 ITIH6Q6UXX5 1313 aa13.73□□□□□ -0.21
SGCE-201ENST00000265735 KIF20AO95235 890 aa13.72□□□□□ -0.21
SGCE-201ENST00000265735 FGFR1OPO95684 399 aaKnown RBP13.72□□□□□ -0.21
SGCE-201ENST00000265735 KCNE1P15382 129 aa13.72□□□□□ -0.21
SGCE-201ENST00000265735 PMS1P54277 932 aaKnown RBP13.72□□□□□ -0.21
SGCE-201ENST00000265735 OSTNP61366 133 aa13.72□□□□□ -0.21
SGCE-201ENST00000265735 KCNA1Q09470 495 aa13.72□□□□□ -0.21
SGCE-201ENST00000265735 CTC1Q2NKJ3 1217 aa13.72□□□□□ -0.21
SGCE-201ENST00000265735 FOXR2Q6PJQ5 311 aa13.72□□□□□ -0.21
SGCE-201ENST00000265735 ADGRD2Q7Z7M1 963 aa13.72□□□□□ -0.21
SGCE-201ENST00000265735 PPFIBP1Q86W92 1011 aa13.72□□□□□ -0.21
SGCE-201ENST00000265735 SNX27Q96L92 541 aa13.72□□□□□ -0.21
SGCE-201ENST00000265735 TCF25Q9BQ70 676 aa13.72□□□□□ -0.21
SGCE-201ENST00000265735 NGRNQ9NPE2 291 aaKnown RBP13.72□□□□□ -0.21
SGCE-201ENST00000265735 CNTN3Q9P232 1028 aa13.72□□□□□ -0.21
SGCE-201ENST00000265735 STK39Q9UEW8 545 aa13.72□□□□□ -0.21
SGCE-201ENST00000265735 COG5Q9UP83 839 aa13.72□□□□□ -0.21
SGCE-201ENST00000265735 PCDHB13Q9Y5F0 798 aa13.72□□□□□ -0.21
SGCE-201ENST00000265735 PCDHGC5Q9Y5F6 944 aa13.72□□□□□ -0.21
SGCE-201ENST00000265735 XIRP2A4UGR9 3374 aa13.72□□□□□ -0.21
SGCE-201ENST00000265735 SMIM28A0A1B0GU29 152 aa13.72□□□□□ -0.21
SGCE-201ENST00000265735 ANKRD63C9JTQ0 380 aa13.72□□□□□ -0.21
SGCE-201ENST00000265735 NCK2O43639 380 aa13.72□□□□□ -0.21
SGCE-201ENST00000265735 GCNT3O95395 438 aa13.72□□□□□ -0.21
SGCE-201ENST00000265735 ADRB2P07550 413 aa13.72□□□□□ -0.21
SGCE-201ENST00000265735 TPM1P09493 284 aa13.72□□□□□ -0.21
SGCE-201ENST00000265735 MYBP10242 640 aa13.72□□□□□ -0.21
SGCE-201ENST00000265735 PBX1P40424 430 aa13.72□□□□□ -0.21
SGCE-201ENST00000265735 OR1G1P47890 313 aa13.72□□□□□ -0.21
SGCE-201ENST00000265735 YARSP54577 528 aaKnown RBP13.72□□□□□ -0.21
SGCE-201ENST00000265735 LRRC63Q05C16 580 aa13.72□□□□□ -0.21
SGCE-201ENST00000265735 KYAT1Q16773 422 aa13.72□□□□□ -0.21
SGCE-201ENST00000265735 SLC10A6Q3KNW5 377 aa13.72□□□□□ -0.21
SGCE-201ENST00000265735 SEZ6Q53EL9 994 aa13.72□□□□□ -0.21
SGCE-201ENST00000265735 ANKRD40Q6AI12 368 aa13.72□□□□□ -0.21
SGCE-201ENST00000265735 CENPPQ6IPU0 288 aa13.72□□□□□ -0.21
SGCE-201ENST00000265735 CREBRFQ8IUR6 639 aa13.72□□□□□ -0.21
SGCE-201ENST00000265735 MRPL43Q8N983 215 aaKnown RBP13.72□□□□□ -0.21
SGCE-201ENST00000265735 ATXN2LQ8WWM7 1075 aaKnown RBP13.72□□□□□ -0.21
SGCE-201ENST00000265735 HLA-CQ95604 372 aa13.72□□□□□ -0.21
SGCE-201ENST00000265735 PABPC5Q96DU9 382 aaKnown RBP13.72□□□□□ -0.21
SGCE-201ENST00000265735 TSG101Q99816 390 aa13.72□□□□□ -0.21
SGCE-201ENST00000265735 DUSP9Q99956 384 aaKnown RBP13.72□□□□□ -0.21
SGCE-201ENST00000265735 ZBP1Q9H171 429 aa13.72□□□□□ -0.21
SGCE-201ENST00000265735 TAB2Q9NYJ8 693 aa13.72□□□□□ -0.21
SGCE-201ENST00000265735 THEGQ9P2T0 379 aa13.72□□□□□ -0.21
SGCE-201ENST00000265735 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.72□□□□□ -0.21
SGCE-201ENST00000265735 IRAK3Q9Y616 596 aa13.72□□□□□ -0.21
SGCE-201ENST00000265735 OGTO15294 1046 aa13.71□□□□□ -0.21
SGCE-201ENST00000265735 TEX33O43247 280 aa13.71□□□□□ -0.21
SGCE-201ENST00000265735 CCP110O43303 1012 aa13.71□□□□□ -0.21
SGCE-201ENST00000265735 CLTAP09496 248 aa13.71□□□□□ -0.21
SGCE-201ENST00000265735 CTSAP10619 480 aa13.71□□□□□ -0.21
SGCE-201ENST00000265735 HARSP12081 509 aaKnown RBP13.71□□□□□ -0.21
SGCE-201ENST00000265735 ADSSP30520 456 aa13.71□□□□□ -0.21
SGCE-201ENST00000265735 TERF1P54274 439 aa13.71□□□□□ -0.21
SGCE-201ENST00000265735 TRIM14Q14142 442 aa13.71□□□□□ -0.21
SGCE-201ENST00000265735 SKIV2LQ15477 1246 aaKnown RBP13.71□□□□□ -0.21
SGCE-201ENST00000265735 FAM26FQ5R3K3 315 aa13.71□□□□□ -0.21
SGCE-201ENST00000265735 SLFN12LQ6IEE8 588 aa13.71□□□□□ -0.21
SGCE-201ENST00000265735 TMC7Q7Z402 723 aa13.71□□□□□ -0.21
SGCE-201ENST00000265735 IRF2BP1Q8IU81 584 aa13.71□□□□□ -0.21
SGCE-201ENST00000265735 VPS52Q8N1B4 723 aa13.71□□□□□ -0.21
SGCE-201ENST00000265735 GLIS3Q8NEA6 775 aa13.71□□□□□ -0.21
SGCE-201ENST00000265735 MICAL1Q8TDZ2 1067 aa13.71□□□□□ -0.21
SGCE-201ENST00000265735 HPS3Q969F9 1004 aa13.71□□□□□ -0.21
SGCE-201ENST00000265735 PPP2R3CQ969Q6 453 aa13.71□□□□□ -0.21
SGCE-201ENST00000265735 ZMAT2Q96NC0 199 aaKnown RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms