RNA–Protein interactions for RNA: ENST00000262570.9

CHCHD3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD3, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-201ENST00000262570 CARNS1A5YM72 827 aa17.98■□□□□ 0.47
CHCHD3-201ENST00000262570 NRP1O14786 923 aa17.98■□□□□ 0.47
CHCHD3-201ENST00000262570 TMEM191BP0C7N4 346 aa17.98■□□□□ 0.47
CHCHD3-201ENST00000262570 BMPR1AP36894 532 aa17.98■□□□□ 0.47
CHCHD3-201ENST00000262570 PBX3P40426 434 aa17.98■□□□□ 0.47
CHCHD3-201ENST00000262570 OR1G1P47890 313 aa17.98■□□□□ 0.47
CHCHD3-201ENST00000262570 CLCNKBP51801 687 aa17.98■□□□□ 0.47
CHCHD3-201ENST00000262570 GUCY2FP51841 1108 aa17.98■□□□□ 0.47
CHCHD3-201ENST00000262570 AP3M2P53677 418 aa17.98■□□□□ 0.47
CHCHD3-201ENST00000262570 UPP1Q16831 310 aa17.98■□□□□ 0.47
CHCHD3-201ENST00000262570 PPP2R2DQ66LE6 453 aa17.98■□□□□ 0.47
CHCHD3-201ENST00000262570 SPRED2Q7Z698 418 aa17.98■□□□□ 0.47
CHCHD3-201ENST00000262570 DHX40Q8IX18 779 aaKnown RBP17.98■□□□□ 0.47
CHCHD3-201ENST00000262570 TMEM130Q8N3G9 435 aa17.98■□□□□ 0.47
CHCHD3-201ENST00000262570 COLGALT1Q8NBJ5 622 aa17.98■□□□□ 0.47
CHCHD3-201ENST00000262570 ANKRD36BP1Q96IX9 119 aa17.98■□□□□ 0.47
CHCHD3-201ENST00000262570 CNOT6LQ96LI5 555 aaKnown RBP17.98■□□□□ 0.47
CHCHD3-201ENST00000262570 UROC1Q96N76 676 aa17.98■□□□□ 0.47
CHCHD3-201ENST00000262570 TGS1Q96RS0 853 aaKnown RBP17.98■□□□□ 0.47
CHCHD3-201ENST00000262570 C17orf80Q9BSJ5 609 aa17.98■□□□□ 0.47
CHCHD3-201ENST00000262570 MTMR12Q9C0I1 747 aa17.98■□□□□ 0.47
CHCHD3-201ENST00000262570 DPP3Q9NY33 737 aa17.98■□□□□ 0.47
CHCHD3-201ENST00000262570 CACNG4Q9UBN1 327 aa17.98■□□□□ 0.47
CHCHD3-201ENST00000262570 FAN1Q9Y2M0 1017 aa17.98■□□□□ 0.47
CHCHD3-201ENST00000262570 GBF1Q92538 1859 aa17.98■□□□□ 0.47
CHCHD3-201ENST00000262570 TDRD15B5MCY1 1934 aaKnown RBP17.97■□□□□ 0.47
CHCHD3-201ENST00000262570 TRIM49P0CI25 452 aa17.97■□□□□ 0.47
CHCHD3-201ENST00000262570 TRIM49CP0CI26 452 aa17.97■□□□□ 0.47
CHCHD3-201ENST00000262570 RPL9P32969 192 aaKnown RBP17.97■□□□□ 0.47
CHCHD3-201ENST00000262570 ERVK-21P61565 698 aa17.97■□□□□ 0.47
CHCHD3-201ENST00000262570 IQCB1Q15051 598 aa17.97■□□□□ 0.47
CHCHD3-201ENST00000262570 TRIM59Q8IWR1 403 aa17.97■□□□□ 0.47
CHCHD3-201ENST00000262570 AOPEPQ8N6M6 819 aa17.97■□□□□ 0.47
CHCHD3-201ENST00000262570 C1orf127Q8N9H9 656 aa17.97■□□□□ 0.47
CHCHD3-201ENST00000262570 CXorf38Q8TB03 319 aa17.97■□□□□ 0.47
CHCHD3-201ENST00000262570 SLC35C1Q96A29 364 aa17.97■□□□□ 0.47
CHCHD3-201ENST00000262570 DDX27Q96GQ7 796 aaKnown RBP17.97■□□□□ 0.47
CHCHD3-201ENST00000262570 ZNF558Q96NG5 402 aa17.97■□□□□ 0.47
CHCHD3-201ENST00000262570 FANCLQ9NW38 375 aa17.97■□□□□ 0.47
CHCHD3-201ENST00000262570 PCDHB12Q9Y5F1 795 aa17.97■□□□□ 0.47
CHCHD3-201ENST00000262570 CDH23Q9H251 3354 aa17.96■□□□□ 0.47
CHCHD3-201ENST00000262570 ANO9A1A5B4 782 aa17.96■□□□□ 0.47
CHCHD3-201ENST00000262570 SMTNL1A8MU46 457 aa17.96■□□□□ 0.47
CHCHD3-201ENST00000262570 NT5C1B-RDH14C9J2C7 533 aa17.96■□□□□ 0.47
CHCHD3-201ENST00000262570 C5orf67F2Z3F1 127 aa17.96■□□□□ 0.47
CHCHD3-201ENST00000262570 SOX1O00570 391 aaPredicted RBP17.96■□□□□ 0.47
CHCHD3-201ENST00000262570 TNNC2P02585 160 aa17.96■□□□□ 0.47
CHCHD3-201ENST00000262570 C4BPAP04003 597 aaKnown RBP17.96■□□□□ 0.47
CHCHD3-201ENST00000262570 PPP3CAQ08209 521 aa17.96■□□□□ 0.47
CHCHD3-201ENST00000262570 EPC2Q52LR7 807 aa17.96■□□□□ 0.47
CHCHD3-201ENST00000262570 CDKAL1Q5VV42 579 aa17.96■□□□□ 0.47
CHCHD3-201ENST00000262570 TRAPPC11Q7Z392 1133 aa17.96■□□□□ 0.47
CHCHD3-201ENST00000262570 FAM114A1Q8IWE2 563 aa17.96■□□□□ 0.47
CHCHD3-201ENST00000262570 RABGGTAQ92696 567 aa17.96■□□□□ 0.47
CHCHD3-201ENST00000262570 SAMD11Q96NU1 681 aa17.96■□□□□ 0.47
CHCHD3-201ENST00000262570 PLVAPQ9BX97 442 aa17.96■□□□□ 0.47
CHCHD3-201ENST00000262570 HSD3B7Q9H2F3 369 aa17.96■□□□□ 0.47
CHCHD3-201ENST00000262570 TSPY26PQ9H489 355 aa17.96■□□□□ 0.47
CHCHD3-201ENST00000262570 CBX8Q9HC52 389 aa17.96■□□□□ 0.47
CHCHD3-201ENST00000262570 PRG3Q9Y2Y8 225 aaPredicted RBP17.96■□□□□ 0.47
CHCHD3-201ENST00000262570 PDCD11Q14690 1871 aaKnown RBP17.96■□□□□ 0.47
CHCHD3-201ENST00000262570 PODXLO00592 558 aa17.96■□□□□ 0.46
CHCHD3-201ENST00000262570 PIRO00625 290 aa17.96■□□□□ 0.46
CHCHD3-201ENST00000262570 GTF2H1P32780 548 aa17.96■□□□□ 0.46
CHCHD3-201ENST00000262570 HSP90AA4PQ58FG1 418 aa17.96■□□□□ 0.46
CHCHD3-201ENST00000262570 DCAF17Q5H9S7 520 aaPredicted RBP17.96■□□□□ 0.46
CHCHD3-201ENST00000262570 TCERG1LQ5VWI1 586 aa17.96■□□□□ 0.46
CHCHD3-201ENST00000262570 C9orf57Q5W0N0 161 aa17.96■□□□□ 0.46
CHCHD3-201ENST00000262570 DCLRE1AQ6PJP8 1040 aa17.96■□□□□ 0.46
CHCHD3-201ENST00000262570 C15orf39Q6ZRI6 1047 aa17.96■□□□□ 0.46
CHCHD3-201ENST00000262570 SV2AQ7L0J3 742 aa17.96■□□□□ 0.46
CHCHD3-201ENST00000262570 TMEM173Q86WV6 379 aaPredicted RBP17.96■□□□□ 0.46
CHCHD3-201ENST00000262570 SLC39A11Q8N1S5 342 aa17.96■□□□□ 0.46
CHCHD3-201ENST00000262570 FAM200AQ8TCP9 573 aa17.96■□□□□ 0.46
CHCHD3-201ENST00000262570 IGSF21Q96ID5 467 aa17.96■□□□□ 0.46
CHCHD3-201ENST00000262570 MARCH5Q9NX47 278 aa17.96■□□□□ 0.46
CHCHD3-201ENST00000262570 SIX4Q9UIU6 781 aa17.96■□□□□ 0.46
CHCHD3-201ENST00000262570 ITGA11Q9UKX5 1188 aa17.96■□□□□ 0.46
CHCHD3-201ENST00000262570 MTUS1Q9ULD2 1270 aa17.96■□□□□ 0.46
CHCHD3-201ENST00000262570 F8W810 466 aa17.95■□□□□ 0.46
CHCHD3-201ENST00000262570 TMEM189-UBE2V1I3L0A0 370 aa17.95■□□□□ 0.46
CHCHD3-201ENST00000262570 B3GAT3O94766 335 aa17.95■□□□□ 0.46
CHCHD3-201ENST00000262570 ITGB3P05106 788 aa17.95■□□□□ 0.46
CHCHD3-201ENST00000262570 RB1P06400 928 aa17.95■□□□□ 0.46
CHCHD3-201ENST00000262570 ZNF18P17022 549 aa17.95■□□□□ 0.46
CHCHD3-201ENST00000262570 IGFBP6P24592 240 aaPredicted RBP17.95■□□□□ 0.46
CHCHD3-201ENST00000262570 CTNNB1P35222 781 aa17.95■□□□□ 0.46
CHCHD3-201ENST00000262570 PPM1AP35813 382 aa17.95■□□□□ 0.46
CHCHD3-201ENST00000262570 GCLMP48507 274 aa17.95■□□□□ 0.46
CHCHD3-201ENST00000262570 ZACNQ401N2 412 aa17.95■□□□□ 0.46
CHCHD3-201ENST00000262570 HABP4Q5JVS0 413 aaKnown RBP17.95■□□□□ 0.46
CHCHD3-201ENST00000262570 TDRD10Q5VZ19 366 aaKnown RBP17.95■□□□□ 0.46
CHCHD3-201ENST00000262570 SCARA3Q6AZY7 606 aa17.95■□□□□ 0.46
CHCHD3-201ENST00000262570 CD300LGQ6UXG3 332 aa17.95■□□□□ 0.46
CHCHD3-201ENST00000262570 CREBRFQ8IUR6 639 aa17.95■□□□□ 0.46
CHCHD3-201ENST00000262570 C3orf58Q8NDZ4 430 aa17.95■□□□□ 0.46
CHCHD3-201ENST00000262570 COLEC11Q9BWP8 271 aa17.95■□□□□ 0.46
CHCHD3-201ENST00000262570 SPG21Q9NZD8 308 aa17.95■□□□□ 0.46
CHCHD3-201ENST00000262570 MAGEC2Q9UBF1 373 aaPredicted RBP17.95■□□□□ 0.46
CHCHD3-201ENST00000262570 BECN2A8MW95 431 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms