RNA–Protein interactions for RNA: ENST00000262539.7

PTPN3-201, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 5 BASIC

Gene PTPN3, Length 6,832 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-201ENST00000262539 MTA2O94776 668 aa8.75□□□□□ -1.01
PTPN3-201ENST00000262539 GALCP54803 685 aa8.75□□□□□ -1.01
PTPN3-201ENST00000262539 SPATA4Q8NEY3 305 aa8.75□□□□□ -1.01
PTPN3-201ENST00000262539 ZBTB9Q96C00 473 aa8.75□□□□□ -1.01
PTPN3-201ENST00000262539 MAP7Q14244 749 aa8.75□□□□□ -1.01
PTPN3-201ENST00000262539 CYP2W1Q8TAV3 490 aa8.75□□□□□ -1.01
PTPN3-201ENST00000262539 SPATA18Q8TC71 538 aa8.75□□□□□ -1.01
PTPN3-201ENST00000262539 WDR24Q96S15 920 aa8.75□□□□□ -1.01
PTPN3-201ENST00000262539 SYNDIG1Q9H7V2 258 aa8.75□□□□□ -1.01
PTPN3-201ENST00000262539 UBN1Q9NPG3 1134 aa8.75□□□□□ -1.01
PTPN3-201ENST00000262539 CNOT8Q9UFF9 292 aaKnown RBP8.75□□□□□ -1.01
PTPN3-201ENST00000262539 SLC8A2Q9UPR5 921 aa8.75□□□□□ -1.01
PTPN3-201ENST00000262539 PFDN6O15212 129 aa8.75□□□□□ -1.01
PTPN3-201ENST00000262539 SLC9A1P19634 815 aa8.75□□□□□ -1.01
PTPN3-201ENST00000262539 EIF4BP23588 611 aaKnown RBP8.75□□□□□ -1.01
PTPN3-201ENST00000262539 TNFRSF8P28908 595 aa8.75□□□□□ -1.01
PTPN3-201ENST00000262539 DRG2P55039 364 aaKnown RBP8.75□□□□□ -1.01
PTPN3-201ENST00000262539 CENPCQ03188 943 aa8.75□□□□□ -1.01
PTPN3-201ENST00000262539 ATRIPQ8WXE1 791 aa8.75□□□□□ -1.01
PTPN3-201ENST00000262539 CHP1Q99653 195 aa8.75□□□□□ -1.01
PTPN3-201ENST00000262539 CCNE2O96020 404 aa8.74□□□□□ -1.01
PTPN3-201ENST00000262539 MCCD1P59942 119 aaPredicted RBP8.74□□□□□ -1.01
PTPN3-201ENST00000262539 EPC2Q52LR7 807 aa8.74□□□□□ -1.01
PTPN3-201ENST00000262539 TAOK1Q7L7X3 1001 aa8.74□□□□□ -1.01
PTPN3-201ENST00000262539 MICALL1Q8N3F8 863 aa8.74□□□□□ -1.01
PTPN3-201ENST00000262539 RDH13Q8NBN7 331 aa8.74□□□□□ -1.01
PTPN3-201ENST00000262539 RNF149Q8NC42 400 aa8.74□□□□□ -1.01
PTPN3-201ENST00000262539 SPDYE1Q8NFV5 336 aaPredicted RBP8.74□□□□□ -1.01
PTPN3-201ENST00000262539 TRPM4Q8TD43 1214 aa8.74□□□□□ -1.01
PTPN3-201ENST00000262539 PARD6BQ9BYG5 372 aa8.74□□□□□ -1.01
PTPN3-201ENST00000262539 PRDM5Q9NQX1 630 aaPredicted RBP8.74□□□□□ -1.01
PTPN3-201ENST00000262539 LAMA4Q16363 1823 aa8.74□□□□□ -1.01
PTPN3-201ENST00000262539 TNPO2O14787 897 aaKnown RBP8.74□□□□□ -1.01
PTPN3-201ENST00000262539 TRIM49P0CI25 452 aa8.74□□□□□ -1.01
PTPN3-201ENST00000262539 TRIM49CP0CI26 452 aa8.74□□□□□ -1.01
PTPN3-201ENST00000262539 ACADSBP45954 432 aa8.74□□□□□ -1.01
PTPN3-201ENST00000262539 PMS1P54277 932 aaKnown RBP8.74□□□□□ -1.01
PTPN3-201ENST00000262539 ZDHHC17Q8IUH5 632 aa8.74□□□□□ -1.01
PTPN3-201ENST00000262539 GLYCTKQ8IVS8 523 aa8.74□□□□□ -1.01
PTPN3-201ENST00000262539 FAM71AQ8IYT1 594 aa8.74□□□□□ -1.01
PTPN3-201ENST00000262539 PCSK9Q8NBP7 692 aaKnown RBP8.74□□□□□ -1.01
PTPN3-201ENST00000262539 FAM76AQ8TAV0 307 aa8.74□□□□□ -1.01
PTPN3-201ENST00000262539 IGKV6D-21A0A0A0MT36 114 aa8.74□□□□□ -1.01
PTPN3-201ENST00000262539 ZRANB2O95218 330 aaKnown RBP eCLIP8.74□□□□□ -1.01
PTPN3-201ENST00000262539 HLA-DRAP01903 254 aa8.74□□□□□ -1.01
PTPN3-201ENST00000262539 PTENP60484 403 aa8.74□□□□□ -1.01
PTPN3-201ENST00000262539 SNAP25P60880 206 aa8.74□□□□□ -1.01
PTPN3-201ENST00000262539 NOP14P78316 857 aaKnown RBP8.74□□□□□ -1.01
PTPN3-201ENST00000262539 ATF7IP2Q5U623 682 aa8.74□□□□□ -1.01
PTPN3-201ENST00000262539 N4BP2L2Q92802 583 aaPredicted RBP8.74□□□□□ -1.01
PTPN3-201ENST00000262539 EMID1Q96A84 441 aaPredicted RBP8.74□□□□□ -1.01
PTPN3-201ENST00000262539 ZNF699Q32M78 642 aa8.74□□□□□ -1.01
PTPN3-201ENST00000262539 LGSNQ5TDP6 509 aa8.74□□□□□ -1.01
PTPN3-201ENST00000262539 ANO5Q75V66 913 aa8.74□□□□□ -1.01
PTPN3-201ENST00000262539 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.74□□□□□ -1.01
PTPN3-201ENST00000262539 LRRC52Q8N7C0 313 aa8.74□□□□□ -1.01
PTPN3-201ENST00000262539 WNK4Q96J92 1243 aa8.74□□□□□ -1.01
PTPN3-201ENST00000262539 FAM213AQ9BRX8 229 aa8.74□□□□□ -1.01
PTPN3-201ENST00000262539 SLC7A5P2Q9GIP4 190 aa8.74□□□□□ -1.01
PTPN3-201ENST00000262539 CNOT10Q9H9A5 744 aaKnown RBP8.74□□□□□ -1.01
PTPN3-201ENST00000262539 RRN3Q9NYV6 651 aa8.74□□□□□ -1.01
PTPN3-201ENST00000262539 HEXIM1O94992 359 aaKnown RBP8.74□□□□□ -1.01
PTPN3-201ENST00000262539 ARL2P36404 184 aa8.74□□□□□ -1.01
PTPN3-201ENST00000262539 PTP4A2Q12974 167 aa8.74□□□□□ -1.01
PTPN3-201ENST00000262539 FAM187BQ17R55 369 aa8.74□□□□□ -1.01
PTPN3-201ENST00000262539 LRIG3Q6UXM1 1119 aa8.74□□□□□ -1.01
PTPN3-201ENST00000262539 COG1Q8WTW3 980 aa8.74□□□□□ -1.01
PTPN3-201ENST00000262539 RAB3IPQ96QF0 476 aaPredicted RBP8.74□□□□□ -1.01
PTPN3-201ENST00000262539 PPP1R16BQ96T49 567 aa8.74□□□□□ -1.01
PTPN3-201ENST00000262539 CYLDQ9NQC7 956 aa8.74□□□□□ -1.01
PTPN3-201ENST00000262539 A0A087X0T9 212 aa8.74□□□□□ -1.01
PTPN3-201ENST00000262539 PPP1R12AO14974 1030 aaPredicted RBP8.74□□□□□ -1.01
PTPN3-201ENST00000262539 B4GALT4O60513 344 aa8.74□□□□□ -1.01
PTPN3-201ENST00000262539 FARP2O94887 1054 aaPredicted RBP8.74□□□□□ -1.01
PTPN3-201ENST00000262539 FAM228BP0C875 321 aa8.74□□□□□ -1.01
PTPN3-201ENST00000262539 HUNKP57058 714 aa8.74□□□□□ -1.01
PTPN3-201ENST00000262539 CHADLQ6NUI6 762 aa8.74□□□□□ -1.01
PTPN3-201ENST00000262539 PALM2Q8IXS6 379 aa8.74□□□□□ -1.01
PTPN3-201ENST00000262539 OPTNQ96CV9 577 aa8.74□□□□□ -1.01
PTPN3-201ENST00000262539 GLIS2Q9BZE0 524 aaPredicted RBP8.74□□□□□ -1.01
PTPN3-201ENST00000262539 TMEM117Q9H0C3 514 aa8.74□□□□□ -1.01
PTPN3-201ENST00000262539 ANAPC5Q9UJX4 755 aa8.74□□□□□ -1.01
PTPN3-201ENST00000262539 ITGA11Q9UKX5 1188 aa8.74□□□□□ -1.01
PTPN3-201ENST00000262539 PCDHB4Q9Y5E5 795 aa8.74□□□□□ -1.01
PTPN3-201ENST00000262539 DPYSL4O14531 572 aa8.73□□□□□ -1.01
PTPN3-201ENST00000262539 CAND2O75155 1236 aa8.73□□□□□ -1.01
PTPN3-201ENST00000262539 ECEL1O95672 775 aa8.73□□□□□ -1.01
PTPN3-201ENST00000262539 NCOA4Q13772 614 aa8.73□□□□□ -1.01
PTPN3-201ENST00000262539 BOLA3Q53S33 107 aa8.73□□□□□ -1.01
PTPN3-201ENST00000262539 TMTC4Q5T4D3 741 aa8.73□□□□□ -1.01
PTPN3-201ENST00000262539 WDR59Q6PJI9 974 aa8.73□□□□□ -1.01
PTPN3-201ENST00000262539 FNIP1Q8TF40 1166 aa8.73□□□□□ -1.01
PTPN3-201ENST00000262539 PGBD4Q96DM1 585 aa8.73□□□□□ -1.01
PTPN3-201ENST00000262539 DDX27Q96GQ7 796 aaKnown RBP8.73□□□□□ -1.01
PTPN3-201ENST00000262539 OLA1Q9NTK5 396 aaKnown RBP8.73□□□□□ -1.01
PTPN3-201ENST00000262539 GOLGA8CPA6NN73 597 aa8.73□□□□□ -1.01
PTPN3-201ENST00000262539 AKR1A1P14550 325 aa8.73□□□□□ -1.01
PTPN3-201ENST00000262539 SCNN1AP37088 669 aa8.73□□□□□ -1.01
PTPN3-201ENST00000262539 RNASE9P60153 205 aaKnown RBP8.73□□□□□ -1.01
PTPN3-201ENST00000262539 AMPD2Q01433 879 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms