RNA–Protein interactions for RNA: ENST00000262158.6

SMAD7-201, Transcript of SMAD family member 7, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD7, Length 3,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD7-201ENST00000262158 LPAR1Q92633 364 aa20.54■□□□□ 0.88
SMAD7-201ENST00000262158 INTS9Q9NV88 658 aaKnown RBP20.54■□□□□ 0.88
SMAD7-201ENST00000262158 COQ4Q9Y3A0 265 aa20.54■□□□□ 0.88
SMAD7-201ENST00000262158 MARK3P27448 753 aa20.53■□□□□ 0.88
SMAD7-201ENST00000262158 GMPSP49915 693 aaPredicted RBP20.53■□□□□ 0.88
SMAD7-201ENST00000262158 POLGP54098 1239 aaPredicted RBP20.53■□□□□ 0.88
SMAD7-201ENST00000262158 CALCOCO2Q13137 446 aa20.53■□□□□ 0.88
SMAD7-201ENST00000262158 SCARA5Q6ZMJ2 495 aa20.53■□□□□ 0.88
SMAD7-201ENST00000262158 EXOC3L1Q86VI1 746 aa20.53■□□□□ 0.88
SMAD7-201ENST00000262158 HOOK3Q86VS8 718 aa20.53■□□□□ 0.88
SMAD7-201ENST00000262158 AGBL3Q8NEM8 1001 aa20.53■□□□□ 0.88
SMAD7-201ENST00000262158 CHMP6Q96FZ7 201 aa20.53■□□□□ 0.88
SMAD7-201ENST00000262158 KCNK9Q9NPC2 374 aa20.53■□□□□ 0.88
SMAD7-201ENST00000262158 NUDT17P0C025 328 aa20.53■□□□□ 0.88
SMAD7-201ENST00000262158 CCND2P30279 289 aa20.53■□□□□ 0.88
SMAD7-201ENST00000262158 ADCY8P40145 1251 aa20.53■□□□□ 0.88
SMAD7-201ENST00000262158 FAM133BQ5BKY9 247 aaKnown RBP20.53■□□□□ 0.88
SMAD7-201ENST00000262158 CYP4F22Q6NT55 531 aa20.53■□□□□ 0.88
SMAD7-201ENST00000262158 CRELD2Q6UXH1 353 aaPredicted RBP20.53■□□□□ 0.88
SMAD7-201ENST00000262158 CNKSR2Q8WXI2 1034 aa20.53■□□□□ 0.88
SMAD7-201ENST00000262158 FAM129AQ9BZQ8 928 aa20.53■□□□□ 0.88
SMAD7-201ENST00000262158 ANKEF1Q9NU02 776 aa20.53■□□□□ 0.88
SMAD7-201ENST00000262158 SLC9A2Q9UBY0 812 aa20.53■□□□□ 0.88
SMAD7-201ENST00000262158 NUB1Q9Y5A7 615 aa20.53■□□□□ 0.88
SMAD7-201ENST00000262158 PASKQ96RG2 1323 aa20.53■□□□□ 0.88
SMAD7-201ENST00000262158 GJB1P08034 283 aa20.52■□□□□ 0.88
SMAD7-201ENST00000262158 MPP2Q14168 576 aa20.52■□□□□ 0.88
SMAD7-201ENST00000262158 JDP2Q8WYK2 163 aa20.52■□□□□ 0.88
SMAD7-201ENST00000262158 ST6GALNAC4Q9H4F1 302 aa20.52■□□□□ 0.88
SMAD7-201ENST00000262158 SAE1Q9UBE0 346 aaPredicted RBP20.52■□□□□ 0.88
SMAD7-201ENST00000262158 ZNF214Q9UL59 606 aaPredicted RBP20.52■□□□□ 0.88
SMAD7-201ENST00000262158 CST3P01034 146 aaPredicted RBP20.52■□□□□ 0.88
SMAD7-201ENST00000262158 NSFP46459 744 aaKnown RBP20.52■□□□□ 0.88
SMAD7-201ENST00000262158 CAMKK2Q96RR4 588 aa20.52■□□□□ 0.88
SMAD7-201ENST00000262158 BANF1O75531 89 aa20.52■□□□□ 0.87
SMAD7-201ENST00000262158 RXRBP28702 533 aa20.52■□□□□ 0.87
SMAD7-201ENST00000262158 EMC2Q15006 297 aa20.52■□□□□ 0.87
SMAD7-201ENST00000262158 KIFAP3Q92845 792 aa20.52■□□□□ 0.87
SMAD7-201ENST00000262158 AGO2Q9UKV8 859 aaKnown RBP20.52■□□□□ 0.87
SMAD7-201ENST00000262158 PODXLO00592 558 aa20.51■□□□□ 0.87
SMAD7-201ENST00000262158 SFNP31947 248 aa20.51■□□□□ 0.87
SMAD7-201ENST00000262158 MMP13P45452 471 aa20.51■□□□□ 0.87
SMAD7-201ENST00000262158 BACE1P56817 501 aa20.51■□□□□ 0.87
SMAD7-201ENST00000262158 GKAP1Q5VSY0 366 aaPredicted RBP20.51■□□□□ 0.87
SMAD7-201ENST00000262158 ICE2Q659A1 982 aa20.51■□□□□ 0.87
SMAD7-201ENST00000262158 DDX27Q96GQ7 796 aaKnown RBP20.51■□□□□ 0.87
SMAD7-201ENST00000262158 FBXL18Q96ME1 805 aa20.51■□□□□ 0.87
SMAD7-201ENST00000262158 ZNF317Q96PQ6 595 aaPredicted RBP20.51■□□□□ 0.87
SMAD7-201ENST00000262158 BRCA2P51587 3418 aa20.51■□□□□ 0.87
SMAD7-201ENST00000262158 THAP12O43422 761 aa20.51■□□□□ 0.87
SMAD7-201ENST00000262158 ATF7P17544 494 aaPredicted RBP20.51■□□□□ 0.87
SMAD7-201ENST00000262158 MAP3K10Q02779 954 aa20.51■□□□□ 0.87
SMAD7-201ENST00000262158 BRDTQ58F21 947 aaPredicted RBP20.51■□□□□ 0.87
SMAD7-201ENST00000262158 FKBP1CQ5VVH2 108 aa20.51■□□□□ 0.87
SMAD7-201ENST00000262158 MICALCLQ6ZW33 695 aa20.51■□□□□ 0.87
SMAD7-201ENST00000262158 TRIM50Q86XT4 487 aa20.51■□□□□ 0.87
SMAD7-201ENST00000262158 PPP1R16BQ96T49 567 aa20.51■□□□□ 0.87
SMAD7-201ENST00000262158 SLC40A1Q9NP59 571 aa20.51■□□□□ 0.87
SMAD7-201ENST00000262158 RBAKQ9NYW8 714 aaPredicted RBP20.51■□□□□ 0.87
SMAD7-201ENST00000262158 TJP2Q9UDY2 1190 aa20.51■□□□□ 0.87
SMAD7-201ENST00000262158 A6NNZ2 444 aa20.5■□□□□ 0.87
SMAD7-201ENST00000262158 GLRA2P23416 452 aa20.5■□□□□ 0.87
SMAD7-201ENST00000262158 IVDP26440 423 aa20.5■□□□□ 0.87
SMAD7-201ENST00000262158 EIF3BP55884 814 aaKnown RBP20.5■□□□□ 0.87
SMAD7-201ENST00000262158 TUBB8Q3ZCM7 444 aa20.5■□□□□ 0.87
SMAD7-201ENST00000262158 ANKRD20A8PQ5CZ79 823 aa20.5■□□□□ 0.87
SMAD7-201ENST00000262158 IWS1Q96ST2 819 aa20.5■□□□□ 0.87
SMAD7-201ENST00000262158 FHDC1Q9C0D6 1143 aaPredicted RBP20.5■□□□□ 0.87
SMAD7-201ENST00000262158 ATP6V0A4Q9HBG4 840 aa20.5■□□□□ 0.87
SMAD7-201ENST00000262158 CYP39A1Q9NYL5 469 aa20.5■□□□□ 0.87
SMAD7-201ENST00000262158 ADAM22Q9P0K1 906 aa20.5■□□□□ 0.87
SMAD7-201ENST00000262158 CSDE1O75534 798 aaKnown RBP20.5■□□□□ 0.87
SMAD7-201ENST00000262158 MTA2O94776 668 aa20.5■□□□□ 0.87
SMAD7-201ENST00000262158 GNA15P30679 374 aa20.5■□□□□ 0.87
SMAD7-201ENST00000262158 HIRAP54198 1017 aaPredicted RBP20.5■□□□□ 0.87
SMAD7-201ENST00000262158 IFT74Q96LB3 600 aa20.5■□□□□ 0.87
SMAD7-201ENST00000262158 UVRAGQ9P2Y5 699 aa20.5■□□□□ 0.87
SMAD7-201ENST00000262158 COL11A1P12107 1806 aaPredicted RBP20.5■□□□□ 0.87
SMAD7-201ENST00000262158 FSCN2O14926 492 aa20.5■□□□□ 0.87
SMAD7-201ENST00000262158 FSBPO95073 299 aa20.5■□□□□ 0.87
SMAD7-201ENST00000262158 ITGBL1O95965 494 aaPredicted RBP20.5■□□□□ 0.87
SMAD7-201ENST00000262158 CYP1B1Q16678 543 aa20.5■□□□□ 0.87
SMAD7-201ENST00000262158 CYP4A22Q5TCH4 519 aa20.5■□□□□ 0.87
SMAD7-201ENST00000262158 ANGEL2Q5VTE6 544 aaKnown RBP20.5■□□□□ 0.87
SMAD7-201ENST00000262158 CNPY4Q8N129 248 aa20.5■□□□□ 0.87
SMAD7-201ENST00000262158 ARHGEF2Q92974 986 aaKnown RBP20.5■□□□□ 0.87
SMAD7-201ENST00000262158 ATP6V0A1Q93050 837 aa20.5■□□□□ 0.87
SMAD7-201ENST00000262158 DCLK3Q9C098 648 aa20.5■□□□□ 0.87
SMAD7-201ENST00000262158 ABCF3Q9NUQ8 709 aa20.5■□□□□ 0.87
SMAD7-201ENST00000262158 FGFR1OP2Q9NVK5 253 aa20.5■□□□□ 0.87
SMAD7-201ENST00000262158 CNOT7Q9UIV1 285 aaKnown RBP20.5■□□□□ 0.87
SMAD7-201ENST00000262158 C4BPAP04003 597 aaKnown RBP20.49■□□□□ 0.87
SMAD7-201ENST00000262158 PSAPP07602 524 aa20.49■□□□□ 0.87
SMAD7-201ENST00000262158 RARGP13631 454 aa20.49■□□□□ 0.87
SMAD7-201ENST00000262158 PTPRAP18433 802 aa20.49■□□□□ 0.87
SMAD7-201ENST00000262158 FASTKD3Q14CZ7 662 aaKnown RBP20.49■□□□□ 0.87
SMAD7-201ENST00000262158 WDR44Q5JSH3 913 aa20.49■□□□□ 0.87
SMAD7-201ENST00000262158 SYCP2LQ5T4T6 812 aa20.49■□□□□ 0.87
SMAD7-201ENST00000262158 SAMD3Q8N6K7 520 aa20.49■□□□□ 0.87
SMAD7-201ENST00000262158 DYDC1Q8WWB3 177 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms