RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 ROR1Q01973 937 aa10.26□□□□□ -0.77
CTDSPL2-201ENST00000260327 ATP1A4Q13733 1029 aa10.26□□□□□ -0.77
CTDSPL2-201ENST00000260327 TNFAIP1Q13829 316 aa10.26□□□□□ -0.77
CTDSPL2-201ENST00000260327 TMED8Q6PL24 325 aaPredicted RBP10.26□□□□□ -0.77
CTDSPL2-201ENST00000260327 IFNEQ86WN2 208 aa10.26□□□□□ -0.77
CTDSPL2-201ENST00000260327 CCDC103Q8IW40 242 aa10.26□□□□□ -0.77
CTDSPL2-201ENST00000260327 ANKS1AQ92625 1134 aa10.26□□□□□ -0.77
CTDSPL2-201ENST00000260327 NLRP4Q96MN2 994 aa10.26□□□□□ -0.77
CTDSPL2-201ENST00000260327 CPS1P31327 1500 aa10.26□□□□□ -0.77
CTDSPL2-201ENST00000260327 ATMINO43313 823 aaPredicted RBP10.26□□□□□ -0.77
CTDSPL2-201ENST00000260327 GNA15P30679 374 aa10.26□□□□□ -0.77
CTDSPL2-201ENST00000260327 MTMR1Q13613 665 aa10.26□□□□□ -0.77
CTDSPL2-201ENST00000260327 ZC3H12BQ5HYM0 836 aaKnown RBP10.26□□□□□ -0.77
CTDSPL2-201ENST00000260327 ZNF786Q8N393 782 aa10.26□□□□□ -0.77
CTDSPL2-201ENST00000260327 NSUN4Q96CB9 384 aaKnown RBP10.26□□□□□ -0.77
CTDSPL2-201ENST00000260327 M0R3G1 203 aa10.26□□□□□ -0.77
CTDSPL2-201ENST00000260327 TMCC1O94876 653 aa10.26□□□□□ -0.77
CTDSPL2-201ENST00000260327 TFDP1Q14186 410 aa10.26□□□□□ -0.77
CTDSPL2-201ENST00000260327 CLEC4FQ8N1N0 589 aa10.26□□□□□ -0.77
CTDSPL2-201ENST00000260327 OPTNQ96CV9 577 aa10.26□□□□□ -0.77
CTDSPL2-201ENST00000260327 PRPF18Q99633 342 aaKnown RBP10.26□□□□□ -0.77
CTDSPL2-201ENST00000260327 LXNQ9BS40 222 aa10.26□□□□□ -0.77
CTDSPL2-201ENST00000260327 TSR3Q9UJK0 312 aaKnown RBP10.26□□□□□ -0.77
CTDSPL2-201ENST00000260327 RAD17O75943 681 aa10.26□□□□□ -0.77
CTDSPL2-201ENST00000260327 PSAPP07602 524 aa10.26□□□□□ -0.77
CTDSPL2-201ENST00000260327 AKR1B1P15121 316 aa10.26□□□□□ -0.77
CTDSPL2-201ENST00000260327 ITIH2P19823 946 aa10.26□□□□□ -0.77
CTDSPL2-201ENST00000260327 C12orf60Q5U649 245 aa10.26□□□□□ -0.77
CTDSPL2-201ENST00000260327 APLFQ8IW19 511 aaPredicted RBP10.26□□□□□ -0.77
CTDSPL2-201ENST00000260327 OSBPL8Q9BZF1 889 aa10.26□□□□□ -0.77
CTDSPL2-201ENST00000260327 CD209Q9NNX6 404 aa10.26□□□□□ -0.77
CTDSPL2-201ENST00000260327 APBA3O96018 575 aa10.25□□□□□ -0.77
CTDSPL2-201ENST00000260327 SLC20A2Q08357 652 aa10.25□□□□□ -0.77
CTDSPL2-201ENST00000260327 SEMA3FQ13275 785 aa10.25□□□□□ -0.77
CTDSPL2-201ENST00000260327 NLRP9Q7RTR0 991 aa10.25□□□□□ -0.77
CTDSPL2-201ENST00000260327 RFWD2Q8NHY2 731 aa10.25□□□□□ -0.77
CTDSPL2-201ENST00000260327 DCAF4Q8WV16 495 aa10.25□□□□□ -0.77
CTDSPL2-201ENST00000260327 KAZALD1Q96I82 304 aa10.25□□□□□ -0.77
CTDSPL2-201ENST00000260327 VPS39Q96JC1 886 aa10.25□□□□□ -0.77
CTDSPL2-201ENST00000260327 SLC9A2Q9UBY0 812 aa10.25□□□□□ -0.77
CTDSPL2-201ENST00000260327 HERC5Q9UII4 1024 aaKnown RBP10.25□□□□□ -0.77
CTDSPL2-201ENST00000260327 A0A1W2PQJ5 194 aa10.25□□□□□ -0.77
CTDSPL2-201ENST00000260327 TMEM179Q6ZVK1 233 aa10.25□□□□□ -0.77
CTDSPL2-201ENST00000260327 ARMCX6Q7L4S7 300 aa10.25□□□□□ -0.77
CTDSPL2-201ENST00000260327 TMEM35BQ8NCS4 154 aa10.25□□□□□ -0.77
CTDSPL2-201ENST00000260327 REEP2Q9BRK0 252 aa10.25□□□□□ -0.77
CTDSPL2-201ENST00000260327 FAM129AQ9BZQ8 928 aa10.25□□□□□ -0.77
CTDSPL2-201ENST00000260327 NDEL1Q9GZM8 345 aa10.25□□□□□ -0.77
CTDSPL2-201ENST00000260327 CNGB3Q9NQW8 809 aa10.25□□□□□ -0.77
CTDSPL2-201ENST00000260327 HACD3Q9P035 362 aa10.25□□□□□ -0.77
CTDSPL2-201ENST00000260327 UBE4BO95155 1302 aa10.25□□□□□ -0.77
CTDSPL2-201ENST00000260327 GOLGA8CPA6NN73 597 aa10.25□□□□□ -0.77
CTDSPL2-201ENST00000260327 RTN2O75298 545 aa10.25□□□□□ -0.77
CTDSPL2-201ENST00000260327 SMARCA1P28370 1054 aa10.25□□□□□ -0.77
CTDSPL2-201ENST00000260327 S100A5P33763 92 aa10.25□□□□□ -0.77
CTDSPL2-201ENST00000260327 MAGEA4P43358 317 aa10.25□□□□□ -0.77
CTDSPL2-201ENST00000260327 MAP3K7CLP57077 242 aa10.25□□□□□ -0.77
CTDSPL2-201ENST00000260327 PDIA5Q14554 519 aa10.25□□□□□ -0.77
CTDSPL2-201ENST00000260327 TTC33Q6PID6 262 aaPredicted RBP10.25□□□□□ -0.77
CTDSPL2-201ENST00000260327 LAYNQ6UX15 382 aa10.25□□□□□ -0.77
CTDSPL2-201ENST00000260327 CPA5Q8WXQ8 436 aa10.25□□□□□ -0.77
CTDSPL2-201ENST00000260327 C10orf88Q9H8K7 445 aa10.25□□□□□ -0.77
CTDSPL2-201ENST00000260327 CNTNAP5Q8WYK1 1306 aa10.25□□□□□ -0.77
CTDSPL2-201ENST00000260327 PDXKO00764 312 aa10.25□□□□□ -0.77
CTDSPL2-201ENST00000260327 ATXN8OSP0DMR3 200 aa10.25□□□□□ -0.77
CTDSPL2-201ENST00000260327 PTK7Q13308 1070 aa10.25□□□□□ -0.77
CTDSPL2-201ENST00000260327 ORC2Q13416 577 aaPredicted RBP10.25□□□□□ -0.77
CTDSPL2-201ENST00000260327 PDIA6Q15084 440 aa10.25□□□□□ -0.77
CTDSPL2-201ENST00000260327 SLC27A3Q5K4L6 730 aa10.25□□□□□ -0.77
CTDSPL2-201ENST00000260327 SMIM5Q71RC9 77 aa10.25□□□□□ -0.77
CTDSPL2-201ENST00000260327 ARL10Q8N8L6 244 aa10.25□□□□□ -0.77
CTDSPL2-201ENST00000260327 TMEM237Q96Q45 408 aa10.25□□□□□ -0.77
CTDSPL2-201ENST00000260327 ROPN1BQ9BZX4 212 aaPredicted RBP10.25□□□□□ -0.77
CTDSPL2-201ENST00000260327 ROPN1Q9HAT0 212 aaPredicted RBP10.25□□□□□ -0.77
CTDSPL2-201ENST00000260327 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.25□□□□□ -0.77
CTDSPL2-201ENST00000260327 M0QZ92 97 aa10.25□□□□□ -0.77
CTDSPL2-201ENST00000260327 NFIBO00712 420 aa10.25□□□□□ -0.77
CTDSPL2-201ENST00000260327 INPP5AQ14642 412 aa10.25□□□□□ -0.77
CTDSPL2-201ENST00000260327 C3orf20Q8ND61 904 aa10.25□□□□□ -0.77
CTDSPL2-201ENST00000260327 STK33Q9BYT3 514 aa10.25□□□□□ -0.77
CTDSPL2-201ENST00000260327 EIF2B2P49770 351 aaKnown RBP10.24□□□□□ -0.77
CTDSPL2-201ENST00000260327 GPR141Q7Z602 305 aa10.24□□□□□ -0.77
CTDSPL2-201ENST00000260327 SIX6OS1Q8N1H7 587 aa10.24□□□□□ -0.77
CTDSPL2-201ENST00000260327 SLC25A41Q8N5S1 370 aa10.24□□□□□ -0.77
CTDSPL2-201ENST00000260327 ZFYVE19Q96K21 471 aa10.24□□□□□ -0.77
CTDSPL2-201ENST00000260327 ZNF668Q96K58 619 aaPredicted RBP10.24□□□□□ -0.77
CTDSPL2-201ENST00000260327 DCLRE1BQ9H816 532 aa10.24□□□□□ -0.77
CTDSPL2-201ENST00000260327 PFASO15067 1338 aa10.24□□□□□ -0.77
CTDSPL2-201ENST00000260327 PIK3R2O00459 728 aa10.24□□□□□ -0.77
CTDSPL2-201ENST00000260327 SMNDC1O75940 238 aaKnown RBP eCLIP10.24□□□□□ -0.77
CTDSPL2-201ENST00000260327 OSBPP22059 807 aa10.24□□□□□ -0.77
CTDSPL2-201ENST00000260327 OTUD4Q01804 1114 aaKnown RBP10.24□□□□□ -0.77
CTDSPL2-201ENST00000260327 CHI3L2Q15782 390 aa10.24□□□□□ -0.77
CTDSPL2-201ENST00000260327 ZC2HC1CQ53FD0 456 aaPredicted RBP10.24□□□□□ -0.77
CTDSPL2-201ENST00000260327 MTDHQ86UE4 582 aaKnown RBP10.24□□□□□ -0.77
CTDSPL2-201ENST00000260327 PACSIN1Q9BY11 444 aa10.24□□□□□ -0.77
CTDSPL2-201ENST00000260327 IL1RL2Q9HB29 575 aa10.24□□□□□ -0.77
CTDSPL2-201ENST00000260327 STK32BQ9NY57 414 aa10.24□□□□□ -0.77
CTDSPL2-201ENST00000260327 UTP6Q9NYH9 597 aaKnown RBP10.24□□□□□ -0.77
CTDSPL2-201ENST00000260327 APEX2Q9UBZ4 518 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms