RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 DGKZQ13574 1117 aa5.03□□□□□ -1.6
USP44-201ENST00000258499 KIF22Q14807 665 aa5.03□□□□□ -1.6
USP44-201ENST00000258499 CNGA2Q16280 664 aa5.03□□□□□ -1.6
USP44-201ENST00000258499 CCDC62Q6P9F0 684 aa5.03□□□□□ -1.6
USP44-201ENST00000258499 CENPUQ71F23 418 aa5.03□□□□□ -1.6
USP44-201ENST00000258499 NIM1KQ8IY84 436 aa5.03□□□□□ -1.6
USP44-201ENST00000258499 THNSL1Q8IYQ7 743 aa5.03□□□□□ -1.6
USP44-201ENST00000258499 C3orf20Q8ND61 904 aa5.03□□□□□ -1.6
USP44-201ENST00000258499 CERKQ8TCT0 537 aa5.03□□□□□ -1.6
USP44-201ENST00000258499 MORC4Q8TE76 937 aa5.03□□□□□ -1.6
USP44-201ENST00000258499 SEMA4DQ92854 862 aa5.03□□□□□ -1.6
USP44-201ENST00000258499 KDM4CQ9H3R0 1056 aa5.03□□□□□ -1.6
USP44-201ENST00000258499 PICK1Q9NRD5 415 aa5.03□□□□□ -1.6
USP44-201ENST00000258499 RNF146Q9NTX7 359 aa5.03□□□□□ -1.6
USP44-201ENST00000258499 TXLNGQ9NUQ3 528 aa5.03□□□□□ -1.6
USP44-201ENST00000258499 RBAKQ9NYW8 714 aaPredicted RBP5.03□□□□□ -1.6
USP44-201ENST00000258499 PNMA3Q9UL41 463 aa5.03□□□□□ -1.6
USP44-201ENST00000258499 NAALADL1Q9UQQ1 740 aa5.03□□□□□ -1.6
USP44-201ENST00000258499 NEU2Q9Y3R4 380 aa5.03□□□□□ -1.6
USP44-201ENST00000258499 NCANO14594 1321 aa5.03□□□□□ -1.6
USP44-201ENST00000258499 KDM4FA0A1W2PPD8 638 aa5.03□□□□□ -1.6
USP44-201ENST00000258499 FAM47DPA6NHR8 397 aa5.03□□□□□ -1.6
USP44-201ENST00000258499 H7C0C1 242 aa5.03□□□□□ -1.6
USP44-201ENST00000258499 MAPK13O15264 365 aa5.03□□□□□ -1.6
USP44-201ENST00000258499 ENTPD3O75355 529 aa5.03□□□□□ -1.6
USP44-201ENST00000258499 TJP3O95049 919 aa5.03□□□□□ -1.6
USP44-201ENST00000258499 NUDT17P0C025 328 aa5.03□□□□□ -1.6
USP44-201ENST00000258499 NQO1P15559 274 aaKnown RBP5.03□□□□□ -1.6
USP44-201ENST00000258499 MSH2P43246 934 aa5.03□□□□□ -1.6
USP44-201ENST00000258499 ATP5OP48047 213 aa5.03□□□□□ -1.6
USP44-201ENST00000258499 COPS2P61201 443 aa5.03□□□□□ -1.6
USP44-201ENST00000258499 JAG1P78504 1218 aa5.03□□□□□ -1.6
USP44-201ENST00000258499 FMO1Q01740 532 aa5.03□□□□□ -1.6
USP44-201ENST00000258499 LMNB2Q03252 620 aa5.03□□□□□ -1.6
USP44-201ENST00000258499 OVGP1Q12889 678 aa5.03□□□□□ -1.6
USP44-201ENST00000258499 ATP13A4Q4VNC1 1196 aa5.03□□□□□ -1.6
USP44-201ENST00000258499 DACT2Q5SW24 774 aa5.03□□□□□ -1.6
USP44-201ENST00000258499 UBAP2Q5T6F2 1119 aaKnown RBP5.03□□□□□ -1.6
USP44-201ENST00000258499 CASC4Q6P4E1 433 aa5.03□□□□□ -1.6
USP44-201ENST00000258499 CEP128Q6ZU80 1094 aa5.03□□□□□ -1.6
USP44-201ENST00000258499 RFX6Q8HWS3 928 aa5.03□□□□□ -1.6
USP44-201ENST00000258499 LMNTD2Q8IXW0 634 aa5.03□□□□□ -1.6
USP44-201ENST00000258499 PARD3BQ8TEW8 1205 aa5.03□□□□□ -1.6
USP44-201ENST00000258499 HSPH1Q92598 858 aa5.03□□□□□ -1.6
USP44-201ENST00000258499 FAM81BQ96LP2 452 aa5.03□□□□□ -1.6
USP44-201ENST00000258499 KREMEN1Q96MU8 473 aa5.03□□□□□ -1.6
USP44-201ENST00000258499 RILPQ96NA2 401 aa5.03□□□□□ -1.6
USP44-201ENST00000258499 SERPINB12Q96P63 405 aa5.03□□□□□ -1.6
USP44-201ENST00000258499 MCEEQ96PE7 176 aa5.03□□□□□ -1.6
USP44-201ENST00000258499 ROPN1BQ9BZX4 212 aaPredicted RBP5.03□□□□□ -1.6
USP44-201ENST00000258499 ROPN1Q9HAT0 212 aaPredicted RBP5.03□□□□□ -1.6
USP44-201ENST00000258499 NPHS2Q9NP85 383 aa5.03□□□□□ -1.6
USP44-201ENST00000258499 ZNF70Q9UC06 446 aaPredicted RBP5.03□□□□□ -1.6
USP44-201ENST00000258499 AGO2Q9UKV8 859 aaKnown RBP5.03□□□□□ -1.6
USP44-201ENST00000258499 SUFUQ9UMX1 484 aa5.03□□□□□ -1.6
USP44-201ENST00000258499 STXBP5LQ9Y2K9 1186 aa5.03□□□□□ -1.6
USP44-201ENST00000258499 TMX2Q9Y320 296 aa5.03□□□□□ -1.6
USP44-201ENST00000258499 PCDHB2Q9Y5E7 798 aa5.03□□□□□ -1.6
USP44-201ENST00000258499 PCDHA3Q9Y5H8 950 aa5.03□□□□□ -1.6
USP44-201ENST00000258499 PCDHA10Q9Y5I2 948 aa5.03□□□□□ -1.6
USP44-201ENST00000258499 MAD1L1Q9Y6D9 718 aa5.03□□□□□ -1.6
USP44-201ENST00000258499 UBE4BO95155 1302 aa5.03□□□□□ -1.6
USP44-201ENST00000258499 IGLV3-22A0A075B6J6 115 aa5.03□□□□□ -1.6
USP44-201ENST00000258499 CFAP69A5D8W1 941 aa5.03□□□□□ -1.6
USP44-201ENST00000258499 PIK3R2O00459 728 aa5.03□□□□□ -1.6
USP44-201ENST00000258499 P4HA2O15460 535 aa5.03□□□□□ -1.6
USP44-201ENST00000258499 SNX3O60493 162 aa5.03□□□□□ -1.6
USP44-201ENST00000258499 MT-ND3P03897 115 aa5.03□□□□□ -1.6
USP44-201ENST00000258499 INHBAP08476 426 aa5.03□□□□□ -1.6
USP44-201ENST00000258499 PSMA2P25787 234 aa5.03□□□□□ -1.6
USP44-201ENST00000258499 PHBP35232 272 aa5.03□□□□□ -1.6
USP44-201ENST00000258499 MMP13P45452 471 aa5.03□□□□□ -1.6
USP44-201ENST00000258499 ALDH5A1P51649 535 aaPredicted RBP5.03□□□□□ -1.6
USP44-201ENST00000258499 JAK3P52333 1124 aa5.03□□□□□ -1.6
USP44-201ENST00000258499 KRT76Q01546 638 aa5.03□□□□□ -1.6
USP44-201ENST00000258499 RRP1BQ14684 758 aaKnown RBP5.03□□□□□ -1.6
USP44-201ENST00000258499 CDO1Q16878 200 aa5.03□□□□□ -1.6
USP44-201ENST00000258499 TSNAXIP1Q2TAA8 658 aa5.03□□□□□ -1.6
USP44-201ENST00000258499 GNPTABQ3T906 1256 aa5.03□□□□□ -1.6
USP44-201ENST00000258499 C6orf163Q5TEZ5 329 aa5.03□□□□□ -1.6
USP44-201ENST00000258499 PRAMEF18Q5VWM3 479 aa5.03□□□□□ -1.6
USP44-201ENST00000258499 CHADLQ6NUI6 762 aa5.03□□□□□ -1.6
USP44-201ENST00000258499 ZDHHC24Q6UX98 284 aa5.03□□□□□ -1.6
USP44-201ENST00000258499 CDR2LQ86X02 465 aaPredicted RBP5.03□□□□□ -1.6
USP44-201ENST00000258499 ERICH1Q86X53 443 aa5.03□□□□□ -1.6
USP44-201ENST00000258499 RHPN2Q8IUC4 686 aa5.03□□□□□ -1.6
USP44-201ENST00000258499 CDAN1Q8IWY9 1227 aa5.03□□□□□ -1.6
USP44-201ENST00000258499 MAML1Q92585 1016 aa5.03□□□□□ -1.6
USP44-201ENST00000258499 SPDL1Q96EA4 605 aa5.03□□□□□ -1.6
USP44-201ENST00000258499 TMEM237Q96Q45 408 aa5.03□□□□□ -1.6
USP44-201ENST00000258499 TARS2Q9BW92 718 aaKnown RBP5.03□□□□□ -1.6
USP44-201ENST00000258499 C10orf88Q9H8K7 445 aa5.03□□□□□ -1.6
USP44-201ENST00000258499 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.03□□□□□ -1.6
USP44-201ENST00000258499 HAO1Q9UJM8 370 aa5.03□□□□□ -1.6
USP44-201ENST00000258499 RPTORQ8N122 1335 aa5.03□□□□□ -1.6
USP44-201ENST00000258499 ADAMTSL3P82987 1691 aa5.03□□□□□ -1.61
USP44-201ENST00000258499 MYH3P11055 1940 aa5.02□□□□□ -1.61
USP44-201ENST00000258499 INO80B-WBP1J3KQ70 363 aa5.02□□□□□ -1.61
USP44-201ENST00000258499 NOP56O00567 594 aaKnown RBP5.02□□□□□ -1.61
USP44-201ENST00000258499 ASAP2O43150 1006 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms