RNA–Protein interactions for RNA: ENST00000256474.2

VHL-201, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VHL, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-201ENST00000256474 ZWILCHQ9H900 591 aa14.37□□□□□ -0.11
VHL-201ENST00000256474 TMEM8AQ9HCN3 771 aa14.37□□□□□ -0.11
VHL-201ENST00000256474 PCYOX1Q9UHG3 505 aa14.37□□□□□ -0.11
VHL-201ENST00000256474 GJA3Q9Y6H8 435 aa14.37□□□□□ -0.11
VHL-201ENST00000256474 LAMA3Q16787 3333 aa14.36□□□□□ -0.11
VHL-201ENST00000256474 LRRD1A4D1F6 860 aa14.36□□□□□ -0.11
VHL-201ENST00000256474 SGK1O00141 431 aa14.36□□□□□ -0.11
VHL-201ENST00000256474 HLA-DRAP01903 254 aa14.36□□□□□ -0.11
VHL-201ENST00000256474 KRT1P04264 644 aa14.36□□□□□ -0.11
VHL-201ENST00000256474 ASNSP08243 561 aa14.36□□□□□ -0.11
VHL-201ENST00000256474 MPP2Q14168 576 aa14.36□□□□□ -0.11
VHL-201ENST00000256474 TMEM161BQ8NDZ6 487 aa14.36□□□□□ -0.11
VHL-201ENST00000256474 CCDC77Q9BR77 488 aa14.36□□□□□ -0.11
VHL-201ENST00000256474 TARS2Q9BW92 718 aaKnown RBP14.36□□□□□ -0.11
VHL-201ENST00000256474 PITPNM3Q9BZ71 974 aa14.36□□□□□ -0.11
VHL-201ENST00000256474 POLR3FQ9H1D9 316 aaPredicted RBP14.36□□□□□ -0.11
VHL-201ENST00000256474 KLRG2A4D1S0 409 aaPredicted RBP14.36□□□□□ -0.11
VHL-201ENST00000256474 SLC26A4O43511 780 aa14.36□□□□□ -0.11
VHL-201ENST00000256474 POTEJP0CG39 1038 aa14.36□□□□□ -0.11
VHL-201ENST00000256474 MARK3P27448 753 aa14.36□□□□□ -0.11
VHL-201ENST00000256474 GNA15P30679 374 aa14.36□□□□□ -0.11
VHL-201ENST00000256474 GPS1Q13098 491 aa14.36□□□□□ -0.11
VHL-201ENST00000256474 TRIM68Q6AZZ1 485 aa14.36□□□□□ -0.11
VHL-201ENST00000256474 ART4Q93070 314 aa14.36□□□□□ -0.11
VHL-201ENST00000256474 RNF146Q9NTX7 359 aa14.36□□□□□ -0.11
VHL-201ENST00000256474 NAALADL1Q9UQQ1 740 aa14.36□□□□□ -0.11
VHL-201ENST00000256474 USP15Q9Y4E8 981 aaPredicted RBP14.36□□□□□ -0.11
VHL-201ENST00000256474 DHX15O43143 795 aaKnown RBP14.36□□□□□ -0.11
VHL-201ENST00000256474 ICAM1P05362 532 aa14.36□□□□□ -0.11
VHL-201ENST00000256474 CETPP11597 493 aa14.36□□□□□ -0.11
VHL-201ENST00000256474 NLRP11P59045 1033 aaKnown RBP14.36□□□□□ -0.11
VHL-201ENST00000256474 RPL7AP62424 266 aaKnown RBP14.36□□□□□ -0.11
VHL-201ENST00000256474 RNASELQ05823 741 aaKnown RBP14.36□□□□□ -0.11
VHL-201ENST00000256474 STRN3Q13033 797 aa14.36□□□□□ -0.11
VHL-201ENST00000256474 KCNT1Q5JUK3 1230 aa14.36□□□□□ -0.11
VHL-201ENST00000256474 CYP4A22Q5TCH4 519 aa14.36□□□□□ -0.11
VHL-201ENST00000256474 ARMC9Q7Z3E5 817 aa14.36□□□□□ -0.11
VHL-201ENST00000256474 SEC14L1Q92503 715 aa14.36□□□□□ -0.11
VHL-201ENST00000256474 OSBPL8Q9BZF1 889 aa14.36□□□□□ -0.11
VHL-201ENST00000256474 FHDC1Q9C0D6 1143 aaPredicted RBP14.36□□□□□ -0.11
VHL-201ENST00000256474 SLCO1B3Q9NPD5 702 aa14.36□□□□□ -0.11
VHL-201ENST00000256474 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.36□□□□□ -0.111e-10■■■□□ 14.9
VHL-201ENST00000256474 NINJ2Q9NZG7 142 aa14.36□□□□□ -0.11
VHL-201ENST00000256474 KLHL14Q9P2G3 628 aa14.36□□□□□ -0.11
VHL-201ENST00000256474 AGTPBP1Q9UPW5 1226 aa14.36□□□□□ -0.11
VHL-201ENST00000256474 UMODL1Q5DID0 1318 aa14.35□□□□□ -0.11
VHL-201ENST00000256474 ADGRA3Q8IWK6 1321 aa14.35□□□□□ -0.11
VHL-201ENST00000256474 YY1P25490 414 aa14.35□□□□□ -0.11
VHL-201ENST00000256474 WNT7BP56706 349 aa14.35□□□□□ -0.11
VHL-201ENST00000256474 NEDD9Q14511 834 aa14.35□□□□□ -0.11
VHL-201ENST00000256474 FASTKD3Q14CZ7 662 aaKnown RBP14.35□□□□□ -0.11
VHL-201ENST00000256474 LIN9Q5TKA1 542 aa14.35□□□□□ -0.11
VHL-201ENST00000256474 SPATA21Q7Z572 469 aa14.35□□□□□ -0.11
VHL-201ENST00000256474 USP37Q86T82 979 aa14.35□□□□□ -0.11
VHL-201ENST00000256474 FAM228AQ86W67 206 aa14.35□□□□□ -0.11
VHL-201ENST00000256474 ZBED8Q8IZ13 594 aa14.35□□□□□ -0.11
VHL-201ENST00000256474 TMEM237Q96Q45 408 aa14.35□□□□□ -0.11
VHL-201ENST00000256474 RPAP3Q9H6T3 665 aaPredicted RBP14.35□□□□□ -0.11
VHL-201ENST00000256474 DCTN4Q9UJW0 460 aa14.35□□□□□ -0.11
VHL-201ENST00000256474 MAP3K6O95382 1288 aa14.35□□□□□ -0.11
VHL-201ENST00000256474 KRT19P08727 400 aa14.35□□□□□ -0.11
VHL-201ENST00000256474 CA4P22748 312 aa14.35□□□□□ -0.11
VHL-201ENST00000256474 DRP2Q13474 957 aa14.35□□□□□ -0.11
VHL-201ENST00000256474 PGM5Q15124 567 aa14.35□□□□□ -0.11
VHL-201ENST00000256474 RSBN1LQ6PCB5 846 aaPredicted RBP14.35□□□□□ -0.11
VHL-201ENST00000256474 MCOLN2Q8IZK6 566 aa14.35□□□□□ -0.11
VHL-201ENST00000256474 GPD1LQ8N335 351 aa14.35□□□□□ -0.11
VHL-201ENST00000256474 IWS1Q96ST2 819 aa14.35□□□□□ -0.11
VHL-201ENST00000256474 TXLNGYQ9BZA5 131 aa14.35□□□□□ -0.11
VHL-201ENST00000256474 KCND2Q9NZV8 630 aa14.35□□□□□ -0.11
VHL-201ENST00000256474 NXF1Q9UBU9 619 aaKnown RBP14.35□□□□□ -0.11
VHL-201ENST00000256474 CDK5RAP2Q96SN8 1893 aa14.35□□□□□ -0.11
VHL-201ENST00000256474 AHDC1Q5TGY3 1603 aaPredicted RBP14.35□□□□□ -0.11
VHL-201ENST00000256474 ARFGEF1Q9Y6D6 1849 aa14.35□□□□□ -0.11
VHL-201ENST00000256474 UPP2O95045 317 aa14.35□□□□□ -0.11
VHL-201ENST00000256474 ATP6V1G2O95670 118 aa14.35□□□□□ -0.11
VHL-201ENST00000256474 EGFRP00533 1210 aa14.35□□□□□ -0.11
VHL-201ENST00000256474 GZMAP12544 262 aa14.35□□□□□ -0.11
VHL-201ENST00000256474 ARSEP51690 589 aa14.35□□□□□ -0.11
VHL-201ENST00000256474 CYP24A1Q07973 514 aa14.35□□□□□ -0.11
VHL-201ENST00000256474 CLEC16AQ2KHT3 1053 aa14.35□□□□□ -0.11
VHL-201ENST00000256474 SNRNP48Q6IEG0 339 aaKnown RBP14.35□□□□□ -0.11
VHL-201ENST00000256474 MCF2L2Q86YR7 1114 aa14.35□□□□□ -0.11
VHL-201ENST00000256474 SLC9A9Q8IVB4 645 aa14.35□□□□□ -0.11
VHL-201ENST00000256474 DEPTORQ8TB45 409 aa14.35□□□□□ -0.11
VHL-201ENST00000256474 FAM167BQ9BTA0 163 aa14.35□□□□□ -0.11
VHL-201ENST00000256474 ETNK1Q9HBU6 452 aa14.35□□□□□ -0.11
VHL-201ENST00000256474 AAASQ9NRG9 546 aa14.35□□□□□ -0.11
VHL-201ENST00000256474 UVRAGQ9P2Y5 699 aa14.35□□□□□ -0.11
VHL-201ENST00000256474 SNX3O60493 162 aa14.34□□□□□ -0.11
VHL-201ENST00000256474 TTC4O95801 387 aa14.34□□□□□ -0.11
VHL-201ENST00000256474 CETN2P41208 172 aa14.34□□□□□ -0.11
VHL-201ENST00000256474 SESN3P58005 492 aa14.34□□□□□ -0.11
VHL-201ENST00000256474 GTF2BQ00403 316 aa14.34□□□□□ -0.11
VHL-201ENST00000256474 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.34□□□□□ -0.11
VHL-201ENST00000256474 RMDN2Q96LZ7 410 aa14.34□□□□□ -0.11
VHL-201ENST00000256474 PCSK1NQ9UHG2 260 aa14.34□□□□□ -0.11
VHL-201ENST00000256474 ZNF862O60290 1169 aa14.34□□□□□ -0.11
VHL-201ENST00000256474 DIAPH2O60879 1101 aa14.34□□□□□ -0.11
VHL-201ENST00000256474 ZBED4O75132 1171 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms