RNA–Protein interactions for RNA: ENST00000255465.6

CCNA1-201, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-201ENST00000255465 ZYXQ15942 572 aaKnown RBP12.56□□□□□ -0.4
CCNA1-201ENST00000255465 ZNF423Q2M1K9 1284 aa12.56□□□□□ -0.4
CCNA1-201ENST00000255465 FAM47AQ5JRC9 791 aa12.56□□□□□ -0.4
CCNA1-201ENST00000255465 BORAQ6PGQ7 559 aa12.56□□□□□ -0.4
CCNA1-201ENST00000255465 USP17L2Q6R6M4 530 aa12.56□□□□□ -0.4
CCNA1-201ENST00000255465 SPATA31D4Q6ZUB0 917 aa12.56□□□□□ -0.4
CCNA1-201ENST00000255465 ACAD11Q709F0 780 aa12.56□□□□□ -0.4
CCNA1-201ENST00000255465 TAOK1Q7L7X3 1001 aa12.56□□□□□ -0.4
CCNA1-201ENST00000255465 CDK5RAP3Q96JB5 506 aa12.56□□□□□ -0.4
CCNA1-201ENST00000255465 TUBB6Q9BUF5 446 aa12.56□□□□□ -0.4
CCNA1-201ENST00000255465 RPAP3Q9H6T3 665 aaPredicted RBP12.56□□□□□ -0.4
CCNA1-201ENST00000255465 ZFYVE28Q9HCC9 887 aa12.56□□□□□ -0.4
CCNA1-201ENST00000255465 METTL5Q9NRN9 209 aaKnown RBP12.56□□□□□ -0.4
CCNA1-201ENST00000255465 EMILIN3Q9NT22 766 aa12.56□□□□□ -0.4
CCNA1-201ENST00000255465 C6orf203Q9P0P8 240 aaPredicted RBP12.56□□□□□ -0.4
CCNA1-201ENST00000255465 ANGPTL2Q9UKU9 493 aa12.56□□□□□ -0.4
CCNA1-201ENST00000255465 PJA2O43164 708 aa12.55□□□□□ -0.4
CCNA1-201ENST00000255465 IDH3BO43837 385 aa12.55□□□□□ -0.4
CCNA1-201ENST00000255465 TSPY3P0CV98 308 aa12.55□□□□□ -0.4
CCNA1-201ENST00000255465 TSPY8P0CW00 308 aa12.55□□□□□ -0.4
CCNA1-201ENST00000255465 EEF2P13639 858 aaKnown RBP12.55□□□□□ -0.4
CCNA1-201ENST00000255465 S100A5P33763 92 aa12.55□□□□□ -0.4
CCNA1-201ENST00000255465 ARFIP2P53365 341 aa12.55□□□□□ -0.4
CCNA1-201ENST00000255465 TFAP4Q01664 338 aa12.55□□□□□ -0.4
CCNA1-201ENST00000255465 C6orf118Q5T5N4 469 aa12.55□□□□□ -0.4
CCNA1-201ENST00000255465 TBC1D10CQ8IV04 446 aa12.55□□□□□ -0.4
CCNA1-201ENST00000255465 ESX1Q8N693 406 aa12.55□□□□□ -0.4
CCNA1-201ENST00000255465 NEDD1Q8NHV4 660 aa12.55□□□□□ -0.4
CCNA1-201ENST00000255465 PLGRKTQ9HBL7 147 aa12.55□□□□□ -0.4
CCNA1-201ENST00000255465 PLK2Q9NYY3 685 aa12.55□□□□□ -0.4
CCNA1-201ENST00000255465 LNPEPQ9UIQ6 1025 aa12.55□□□□□ -0.4
CCNA1-201ENST00000255465 SLC45A1Q9Y2W3 748 aa12.55□□□□□ -0.4
CCNA1-201ENST00000255465 PARP14Q460N5 1801 aa12.55□□□□□ -0.4
CCNA1-201ENST00000255465 PLIN4Q96Q06 1357 aa12.55□□□□□ -0.4
CCNA1-201ENST00000255465 IGKV6D-41A0A0C4DH26 115 aa12.55□□□□□ -0.4
CCNA1-201ENST00000255465 GPR25O00155 361 aa12.55□□□□□ -0.4
CCNA1-201ENST00000255465 PIK3CDO00329 1044 aa12.55□□□□□ -0.4
CCNA1-201ENST00000255465 FBP2O00757 339 aa12.55□□□□□ -0.4
CCNA1-201ENST00000255465 PCP11498 1178 aaKnown RBP12.55□□□□□ -0.4
CCNA1-201ENST00000255465 MARK3P27448 753 aa12.55□□□□□ -0.4
CCNA1-201ENST00000255465 XIAPP98170 497 aa12.55□□□□□ -0.4
CCNA1-201ENST00000255465 HNRNPDQ14103 355 aaKnown RBP12.55□□□□□ -0.4
CCNA1-201ENST00000255465 GIT2Q14161 759 aa12.55□□□□□ -0.4
CCNA1-201ENST00000255465 KRT31Q15323 416 aa12.55□□□□□ -0.4
CCNA1-201ENST00000255465 KLHL35Q6PF15 583 aa12.55□□□□□ -0.4
CCNA1-201ENST00000255465 DHRS4L2Q6PKH6 230 aa12.55□□□□□ -0.4
CCNA1-201ENST00000255465 MFSD6Q6ZSS7 791 aa12.55□□□□□ -0.4
CCNA1-201ENST00000255465 HS2ST1Q7LGA3 356 aa12.55□□□□□ -0.4
CCNA1-201ENST00000255465 UBE2Q1Q7Z7E8 422 aa12.55□□□□□ -0.4
CCNA1-201ENST00000255465 CABP7Q86V35 215 aa12.55□□□□□ -0.4
CCNA1-201ENST00000255465 TREML1Q86YW5 311 aa12.55□□□□□ -0.4
CCNA1-201ENST00000255465 MYO1HQ8N1T3 1032 aa12.55□□□□□ -0.4
CCNA1-201ENST00000255465 RIBC1Q8N443 379 aaPredicted RBP12.55□□□□□ -0.4
CCNA1-201ENST00000255465 SPERTQ8NA61 448 aa12.55□□□□□ -0.4
CCNA1-201ENST00000255465 SNF8Q96H20 258 aa12.55□□□□□ -0.4
CCNA1-201ENST00000255465 C12orf42Q96LP6 360 aa12.55□□□□□ -0.4
CCNA1-201ENST00000255465 SRPK1Q96SB4 655 aaKnown RBP12.55□□□□□ -0.4
CCNA1-201ENST00000255465 DDX47Q9H0S4 455 aaKnown RBP12.55□□□□□ -0.4
CCNA1-201ENST00000255465 TMX2Q9Y320 296 aa12.55□□□□□ -0.4
CCNA1-201ENST00000255465 HEY1Q9Y5J3 304 aa12.55□□□□□ -0.4
CCNA1-201ENST00000255465 MGAMO43451 1857 aa12.54□□□□□ -0.4
CCNA1-201ENST00000255465 TSPY2A6NKD2 308 aa12.54□□□□□ -0.4
CCNA1-201ENST00000255465 BOLA2-SMG1P6H3BVE0 249 aa12.54□□□□□ -0.4
CCNA1-201ENST00000255465 RANBP6O60518 1105 aaKnown RBP12.54□□□□□ -0.4
CCNA1-201ENST00000255465 TLR2O60603 784 aa12.54□□□□□ -0.4
CCNA1-201ENST00000255465 OXSR1O95747 527 aaPredicted RBP12.54□□□□□ -0.4
CCNA1-201ENST00000255465 CYP2C8P10632 490 aa12.54□□□□□ -0.4
CCNA1-201ENST00000255465 ZNF12P17014 697 aa12.54□□□□□ -0.4
CCNA1-201ENST00000255465 KRT4P19013 534 aa12.54□□□□□ -0.4
CCNA1-201ENST00000255465 GALK1P51570 392 aa12.54□□□□□ -0.4
CCNA1-201ENST00000255465 FIGNQ5HY92 759 aa12.54□□□□□ -0.4
CCNA1-201ENST00000255465 PDXDC1Q6P996 788 aa12.54□□□□□ -0.4
CCNA1-201ENST00000255465 LRRC8BQ6P9F7 803 aa12.54□□□□□ -0.4
CCNA1-201ENST00000255465 TRIM67Q6ZTA4 783 aa12.54□□□□□ -0.4
CCNA1-201ENST00000255465 TRMT44Q8IYL2 757 aaKnown RBP12.54□□□□□ -0.4
CCNA1-201ENST00000255465 FITM2Q8N6M3 262 aa12.54□□□□□ -0.4
CCNA1-201ENST00000255465 CEP95Q96GE4 821 aa12.54□□□□□ -0.4
CCNA1-201ENST00000255465 COX4I2Q96KJ9 171 aa12.54□□□□□ -0.4
CCNA1-201ENST00000255465 NSMCE3Q96MG7 304 aa12.54□□□□□ -0.4
CCNA1-201ENST00000255465 GSDMAQ96QA5 445 aa12.54□□□□□ -0.4
CCNA1-201ENST00000255465 LACRTQ9GZZ8 138 aa12.54□□□□□ -0.4
CCNA1-201ENST00000255465 RNF41Q9H4P4 317 aaPredicted RBP12.54□□□□□ -0.4
CCNA1-201ENST00000255465 ZDHHC7Q9NXF8 308 aa12.54□□□□□ -0.4
CCNA1-201ENST00000255465 TMEM59LQ9UK28 342 aa12.54□□□□□ -0.4
CCNA1-201ENST00000255465 RLFQ13129 1914 aa12.54□□□□□ -0.4
CCNA1-201ENST00000255465 A0A1W2PQJ5 194 aa12.53□□□□□ -0.4
CCNA1-201ENST00000255465 FAM47E-STBD1D6RA91 191 aa12.53□□□□□ -0.4
CCNA1-201ENST00000255465 BACH1O14867 736 aa12.53□□□□□ -0.4
CCNA1-201ENST00000255465 KMOO15229 486 aa12.53□□□□□ -0.4
CCNA1-201ENST00000255465 GM2AP17900 193 aa12.53□□□□□ -0.4
CCNA1-201ENST00000255465 TKTP29401 623 aaKnown RBP12.53□□□□□ -0.4
CCNA1-201ENST00000255465 ECHS1P30084 290 aa12.53□□□□□ -0.4
CCNA1-201ENST00000255465 HOXA7P31268 230 aaPredicted RBP12.53□□□□□ -0.4
CCNA1-201ENST00000255465 GTF2H1P32780 548 aa12.53□□□□□ -0.4
CCNA1-201ENST00000255465 CYP4A11Q02928 519 aa12.53□□□□□ -0.4
CCNA1-201ENST00000255465 HLTFQ14527 1009 aaKnown RBP eCLIP12.53□□□□□ -0.4
CCNA1-201ENST00000255465 FYB2Q5VWT5 728 aa12.53□□□□□ -0.4
CCNA1-201ENST00000255465 WDR59Q6PJI9 974 aa12.53□□□□□ -0.4
CCNA1-201ENST00000255465 INTS8Q75QN2 995 aaKnown RBP12.53□□□□□ -0.4
CCNA1-201ENST00000255465 SEC14L1Q92503 715 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms