RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 CYP2B6P20813 491 aa19.99■□□□□ 0.79
PTPRE-201ENST00000254667 PPP2R3CQ969Q6 453 aa19.99■□□□□ 0.79
PTPRE-201ENST00000254667 ZFATQ9P243 1243 aa19.99■□□□□ 0.79
PTPRE-201ENST00000254667 GLB1LQ6UWU2 654 aa19.98■□□□□ 0.79
PTPRE-201ENST00000254667 WDR24Q96S15 920 aa19.98■□□□□ 0.79
PTPRE-201ENST00000254667 NDE1Q9NXR1 346 aa19.98■□□□□ 0.79
PTPRE-201ENST00000254667 ARFIP2P53365 341 aa19.98■□□□□ 0.79
PTPRE-201ENST00000254667 NOTUMQ6P988 496 aa19.98■□□□□ 0.79
PTPRE-201ENST00000254667 TRMT10CQ7L0Y3 403 aaKnown RBP19.98■□□□□ 0.79
PTPRE-201ENST00000254667 RMDN1Q96DB5 314 aa19.98■□□□□ 0.79
PTPRE-201ENST00000254667 TAAR1Q96RJ0 339 aa19.98■□□□□ 0.79
PTPRE-201ENST00000254667 AGPAT5Q9NUQ2 364 aa19.98■□□□□ 0.79
PTPRE-201ENST00000254667 SCOCQ9UIL1 159 aa19.98■□□□□ 0.79
PTPRE-201ENST00000254667 FXR1P51114 621 aaKnown RBP eCLIP19.98■□□□□ 0.79
PTPRE-201ENST00000254667 CCZ1BP86790 482 aa19.98■□□□□ 0.79
PTPRE-201ENST00000254667 CCZ1P86791 482 aaPredicted RBP19.98■□□□□ 0.79
PTPRE-201ENST00000254667 SAMD7Q7Z3H4 446 aa19.98■□□□□ 0.79
PTPRE-201ENST00000254667 SLC30A5Q8TAD4 765 aa19.98■□□□□ 0.79
PTPRE-201ENST00000254667 BTBD6Q96KE9 485 aa19.98■□□□□ 0.79
PTPRE-201ENST00000254667 TGS1Q96RS0 853 aaKnown RBP19.98■□□□□ 0.79
PTPRE-201ENST00000254667 MSH4O15457 936 aa19.98■□□□□ 0.79
PTPRE-201ENST00000254667 KCNN4O15554 427 aa19.98■□□□□ 0.79
PTPRE-201ENST00000254667 DCAF4L1Q3SXM0 396 aa19.98■□□□□ 0.79
PTPRE-201ENST00000254667 TBC1D1Q86TI0 1168 aaPredicted RBP19.98■□□□□ 0.79
PTPRE-201ENST00000254667 ERGIC2Q96RQ1 377 aa19.98■□□□□ 0.79
PTPRE-201ENST00000254667 INTUQ9ULD6 942 aa19.98■□□□□ 0.79
PTPRE-201ENST00000254667 TAF11Q15544 211 aa19.97■□□□□ 0.79
PTPRE-201ENST00000254667 BEND6Q5SZJ8 279 aaPredicted RBP19.97■□□□□ 0.79
PTPRE-201ENST00000254667 KIRREL3Q8IZU9 778 aa19.97■□□□□ 0.79
PTPRE-201ENST00000254667 DYRK4Q9NR20 520 aa19.97■□□□□ 0.79
PTPRE-201ENST00000254667 PCDHB8Q9UN66 801 aa19.97■□□□□ 0.79
PTPRE-201ENST00000254667 FAF1Q9UNN5 650 aaPredicted RBP19.97■□□□□ 0.79
PTPRE-201ENST00000254667 CTSHP09668 335 aa19.97■□□□□ 0.79
PTPRE-201ENST00000254667 FGFR2P21802 821 aa19.97■□□□□ 0.79
PTPRE-201ENST00000254667 INPP1P49441 399 aa19.97■□□□□ 0.79
PTPRE-201ENST00000254667 ARHGDIAP52565 204 aa19.97■□□□□ 0.79
PTPRE-201ENST00000254667 EGFL8Q99944 293 aa19.97■□□□□ 0.79
PTPRE-201ENST00000254667 SARS2Q9NP81 518 aaKnown RBP19.97■□□□□ 0.79
PTPRE-201ENST00000254667 KRT82Q9NSB4 513 aa19.97■□□□□ 0.79
PTPRE-201ENST00000254667 PIK3R2O00459 728 aa19.97■□□□□ 0.79
PTPRE-201ENST00000254667 GTF2A2P52657 109 aa19.97■□□□□ 0.79
PTPRE-201ENST00000254667 ARHGEF26Q96DR7 871 aa19.97■□□□□ 0.79
PTPRE-201ENST00000254667 LRRC37BQ96QE4 947 aa19.97■□□□□ 0.79
PTPRE-201ENST00000254667 ESRRBO95718 433 aa19.97■□□□□ 0.79
PTPRE-201ENST00000254667 E2F5Q15329 346 aa19.97■□□□□ 0.79
PTPRE-201ENST00000254667 NBPF9Q3BBW0 867 aa19.97■□□□□ 0.79
PTPRE-201ENST00000254667 KLHDC7AQ5VTJ3 777 aa19.97■□□□□ 0.79
PTPRE-201ENST00000254667 NRBF2Q96F24 287 aa19.97■□□□□ 0.79
PTPRE-201ENST00000254667 GMCL1Q96IK5 515 aa19.97■□□□□ 0.79
PTPRE-201ENST00000254667 POLLQ9UGP5 575 aa19.97■□□□□ 0.79
PTPRE-201ENST00000254667 SSTR3P32745 418 aaPredicted RBP19.96■□□□□ 0.79
PTPRE-201ENST00000254667 PDCD2Q16342 344 aaPredicted RBP19.96■□□□□ 0.79
PTPRE-201ENST00000254667 UGP2Q16851 508 aa19.96■□□□□ 0.79
PTPRE-201ENST00000254667 ANGPTL8Q6UXH0 198 aa19.96■□□□□ 0.79
PTPRE-201ENST00000254667 TAS2R42Q7RTR8 314 aa19.96■□□□□ 0.79
PTPRE-201ENST00000254667 GMCL1P1Q8NEA9 526 aa19.96■□□□□ 0.79
PTPRE-201ENST00000254667 TMEM106CQ9BVX2 250 aa19.96■□□□□ 0.79
PTPRE-201ENST00000254667 TADA3O75528 432 aa19.96■□□□□ 0.79
PTPRE-201ENST00000254667 MCEEQ96PE7 176 aa19.96■□□□□ 0.79
PTPRE-201ENST00000254667 SLC9A1P19634 815 aa19.96■□□□□ 0.79
PTPRE-201ENST00000254667 KLRK1P26718 216 aa19.96■□□□□ 0.79
PTPRE-201ENST00000254667 HUNKP57058 714 aa19.96■□□□□ 0.79
PTPRE-201ENST00000254667 NCLNQ969V3 563 aa19.96■□□□□ 0.79
PTPRE-201ENST00000254667 TBX20Q9UMR3 447 aa19.96■□□□□ 0.79
PTPRE-201ENST00000254667 SMG5Q9UPR3 1016 aaKnown RBP19.96■□□□□ 0.79
PTPRE-201ENST00000254667 KIDINS220Q9ULH0 1771 aa19.96■□□□□ 0.79
PTPRE-201ENST00000254667 CCDC22O60826 627 aa19.96■□□□□ 0.79
PTPRE-201ENST00000254667 ALDH1A1P00352 501 aa19.96■□□□□ 0.79
PTPRE-201ENST00000254667 AGTP01019 485 aa19.96■□□□□ 0.79
PTPRE-201ENST00000254667 RGS7P49802 495 aa19.96■□□□□ 0.79
PTPRE-201ENST00000254667 TERF2Q15554 542 aa19.96■□□□□ 0.79
PTPRE-201ENST00000254667 E4F1Q66K89 784 aaPredicted RBP19.96■□□□□ 0.79
PTPRE-201ENST00000254667 SUDS3Q9H7L9 328 aaPredicted RBP19.96■□□□□ 0.79
PTPRE-201ENST00000254667 SLIT1O75093 1534 aa19.96■□□□□ 0.79
PTPRE-201ENST00000254667 UBA6A0AVT1 1052 aaPredicted RBP19.95■□□□□ 0.78
PTPRE-201ENST00000254667 BYSLQ13895 437 aaKnown RBP19.95■□□□□ 0.78
PTPRE-201ENST00000254667 TBCCQ15814 346 aa19.95■□□□□ 0.78
PTPRE-201ENST00000254667 EFHC1Q5JVL4 640 aa19.95■□□□□ 0.78
PTPRE-201ENST00000254667 C4orf22Q6V702 233 aa19.95■□□□□ 0.78
PTPRE-201ENST00000254667 TC2NQ8N9U0 490 aa19.95■□□□□ 0.78
PTPRE-201ENST00000254667 UNC45AQ9H3U1 944 aa19.95■□□□□ 0.78
PTPRE-201ENST00000254667 RSAD1Q9HA92 442 aa19.95■□□□□ 0.78
PTPRE-201ENST00000254667 EML4Q9HC35 981 aaKnown RBP19.95■□□□□ 0.78
PTPRE-201ENST00000254667 MYO1DO94832 1006 aa19.95■□□□□ 0.78
PTPRE-201ENST00000254667 ANP32DO95626 131 aa19.95■□□□□ 0.78
PTPRE-201ENST00000254667 TCF7P36402 384 aaPredicted RBP19.95■□□□□ 0.78
PTPRE-201ENST00000254667 MAPRE2Q15555 327 aa19.95■□□□□ 0.78
PTPRE-201ENST00000254667 TMEM117Q9H0C3 514 aa19.95■□□□□ 0.78
PTPRE-201ENST00000254667 PPP2R3BQ9Y5P8 575 aa19.95■□□□□ 0.78
PTPRE-201ENST00000254667 TAF6LQ9Y6J9 622 aa19.95■□□□□ 0.78
PTPRE-201ENST00000254667 TGFB2P61812 414 aa19.95■□□□□ 0.78
PTPRE-201ENST00000254667 CDR2Q01850 454 aa19.95■□□□□ 0.78
PTPRE-201ENST00000254667 ATPAF2Q8N5M1 289 aa19.95■□□□□ 0.78
PTPRE-201ENST00000254667 LRRC1Q9BTT6 524 aa19.95■□□□□ 0.78
PTPRE-201ENST00000254667 PREX1Q8TCU6 1659 aa19.95■□□□□ 0.78
PTPRE-201ENST00000254667 PPP1R3GB7ZBB8 358 aa19.95■□□□□ 0.78
PTPRE-201ENST00000254667 HSPA9P38646 679 aaKnown RBP19.95■□□□□ 0.78
PTPRE-201ENST00000254667 PRAMEF18Q5VWM3 479 aa19.95■□□□□ 0.78
PTPRE-201ENST00000254667 LRIG3Q6UXM1 1119 aa19.95■□□□□ 0.78
PTPRE-201ENST00000254667 CD302Q8IX05 232 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms