RNA–Protein interactions for RNA: ENST00000254066.9

RARA-201, Transcript of retinoic acid receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RARA, Length 2,414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-201ENST00000254066 CASP4P49662 377 aa21.69■■□□□ 1.06
RARA-201ENST00000254066 CLK2P49760 499 aaKnown RBP21.69■■□□□ 1.06
RARA-201ENST00000254066 KRT72Q14CN4 511 aa21.69■■□□□ 1.06
RARA-201ENST00000254066 SEPT14Q6ZU15 432 aa21.69■■□□□ 1.06
RARA-201ENST00000254066 OTOAQ7RTW8 1153 aa21.69■■□□□ 1.06
RARA-201ENST00000254066 MTDHQ86UE4 582 aaKnown RBP21.69■■□□□ 1.06
RARA-201ENST00000254066 NME8Q8N427 588 aa21.69■■□□□ 1.06
RARA-201ENST00000254066 PPP1R14BQ96C90 147 aa21.69■■□□□ 1.06
RARA-201ENST00000254066 CFAP57Q96MR6 1250 aa21.69■■□□□ 1.06
RARA-201ENST00000254066 CPVLQ9H3G5 476 aa21.69■■□□□ 1.06
RARA-201ENST00000254066 SEPT11Q9NVA2 429 aaKnown RBP21.69■■□□□ 1.06
RARA-201ENST00000254066 POTEB3A0JP26 581 aa21.69■■□□□ 1.06
RARA-201ENST00000254066 HAUS5O94927 633 aa21.69■■□□□ 1.06
RARA-201ENST00000254066 PABPC4LP0CB38 370 aaKnown RBP21.69■■□□□ 1.06
RARA-201ENST00000254066 CCDC166P0CW27 439 aa21.69■■□□□ 1.06
RARA-201ENST00000254066 PIM1P11309 404 aaPredicted RBP21.69■■□□□ 1.06
RARA-201ENST00000254066 USP4Q13107 963 aa21.69■■□□□ 1.06
RARA-201ENST00000254066 MAP7Q14244 749 aa21.69■■□□□ 1.06
RARA-201ENST00000254066 MESDQ14696 234 aa21.69■■□□□ 1.06
RARA-201ENST00000254066 TMED2Q15363 201 aa21.69■■□□□ 1.06
RARA-201ENST00000254066 ACBD5Q5T8D3 534 aaPredicted RBP21.69■■□□□ 1.06
RARA-201ENST00000254066 POTEBQ6S5H4 581 aa21.69■■□□□ 1.06
RARA-201ENST00000254066 SFR1Q86XK3 245 aa21.69■■□□□ 1.06
RARA-201ENST00000254066 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.69■■□□□ 1.06
RARA-201ENST00000254066 SMC6Q96SB8 1091 aa21.69■■□□□ 1.06
RARA-201ENST00000254066 ANKFY1Q9P2R3 1169 aa21.69■■□□□ 1.06
RARA-201ENST00000254066 STK24Q9Y6E0 443 aa21.69■■□□□ 1.06
RARA-201ENST00000254066 RBM47A0AV96 593 aaKnown RBP21.68■■□□□ 1.06
RARA-201ENST00000254066 RAP1GDS1P52306 607 aa21.68■■□□□ 1.06
RARA-201ENST00000254066 USP17L2Q6R6M4 530 aa21.68■■□□□ 1.06
RARA-201ENST00000254066 MARK2Q7KZI7 788 aaKnown RBP21.68■■□□□ 1.06
RARA-201ENST00000254066 FAM186BQ8IYM0 893 aa21.68■■□□□ 1.06
RARA-201ENST00000254066 ST13P4Q8IZP2 240 aaPredicted RBP21.68■■□□□ 1.06
RARA-201ENST00000254066 VPS52Q8N1B4 723 aa21.68■■□□□ 1.06
RARA-201ENST00000254066 SYT2Q8N9I0 419 aaPredicted RBP21.68■■□□□ 1.06
RARA-201ENST00000254066 TRABDQ9H4I3 376 aa21.68■■□□□ 1.06
RARA-201ENST00000254066 GZMAP12544 262 aa21.68■■□□□ 1.06
RARA-201ENST00000254066 TNNI2P48788 182 aa21.68■■□□□ 1.06
RARA-201ENST00000254066 DSG1Q02413 1049 aa21.68■■□□□ 1.06
RARA-201ENST00000254066 TNIP1Q15025 636 aa21.68■■□□□ 1.06
RARA-201ENST00000254066 FAM91A1Q658Y4 838 aa21.68■■□□□ 1.06
RARA-201ENST00000254066 SPTY2D1Q68D10 685 aaPredicted RBP21.68■■□□□ 1.06
RARA-201ENST00000254066 PPP2R3CQ969Q6 453 aa21.68■■□□□ 1.06
RARA-201ENST00000254066 POP1Q99575 1024 aaKnown RBP21.68■■□□□ 1.06
RARA-201ENST00000254066 EPB41L1Q9H4G0 881 aa21.68■■□□□ 1.06
RARA-201ENST00000254066 COL24A1Q17RW2 1714 aa21.68■■□□□ 1.06
RARA-201ENST00000254066 CYP1A1P04798 512 aaPredicted RBP21.67■■□□□ 1.06
RARA-201ENST00000254066 BCRP11274 1271 aa21.67■■□□□ 1.06
RARA-201ENST00000254066 CRABP2P29373 138 aa21.67■■□□□ 1.06
RARA-201ENST00000254066 NOVP48745 357 aa21.67■■□□□ 1.06
RARA-201ENST00000254066 ZC2HC1CQ53FD0 456 aaPredicted RBP21.67■■□□□ 1.06
RARA-201ENST00000254066 PALB2Q86YC2 1186 aa21.67■■□□□ 1.06
RARA-201ENST00000254066 NEDD1Q8NHV4 660 aa21.67■■□□□ 1.06
RARA-201ENST00000254066 SPOCK2Q92563 424 aa21.67■■□□□ 1.06
RARA-201ENST00000254066 ZNF75CPQ92670 426 aaPredicted RBP21.67■■□□□ 1.06
RARA-201ENST00000254066 INTS2Q9H0H0 1204 aaKnown RBP21.67■■□□□ 1.06
RARA-201ENST00000254066 VAT1LQ9HCJ6 419 aa21.67■■□□□ 1.06
RARA-201ENST00000254066 PCDHB13Q9Y5F0 798 aa21.67■■□□□ 1.06
RARA-201ENST00000254066 TMEM110-MUSTN1A8MSY1 372 aa21.67■■□□□ 1.06
RARA-201ENST00000254066 SPOPO43791 374 aa21.67■■□□□ 1.06
RARA-201ENST00000254066 MAGEC1O60732 1142 aa21.67■■□□□ 1.06
RARA-201ENST00000254066 KCNQ4P56696 695 aa21.67■■□□□ 1.06
RARA-201ENST00000254066 RTP1P59025 263 aa21.67■■□□□ 1.06
RARA-201ENST00000254066 HIC2Q96JB3 615 aa21.67■■□□□ 1.06
RARA-201ENST00000254066 OCEL1Q9H607 264 aa21.67■■□□□ 1.06
RARA-201ENST00000254066 PREBQ9HCU5 417 aa21.67■■□□□ 1.06
RARA-201ENST00000254066 EIF3DO15371 548 aaKnown RBP eCLIP21.66■■□□□ 1.06
RARA-201ENST00000254066 MFSD4BQ5TF39 518 aa21.66■■□□□ 1.06
RARA-201ENST00000254066 KBTBD2Q8IY47 623 aa21.66■■□□□ 1.06
RARA-201ENST00000254066 PSPC1Q8WXF1 523 aaKnown RBP21.66■■□□□ 1.06
RARA-201ENST00000254066 TAF1LQ8IZX4 1826 aa21.66■■□□□ 1.06
RARA-201ENST00000254066 SMIM31A0A1B0GVY4 71 aa21.66■■□□□ 1.06
RARA-201ENST00000254066 ATP9BO43861 1147 aa21.66■■□□□ 1.06
RARA-201ENST00000254066 ZBED4O75132 1171 aa21.66■■□□□ 1.06
RARA-201ENST00000254066 UBTFL6P0CB48 400 aaPredicted RBP21.66■■□□□ 1.06
RARA-201ENST00000254066 CCDC174Q6PII3 467 aa21.66■■□□□ 1.06
RARA-201ENST00000254066 ANKS1BQ7Z6G8 1248 aa21.66■■□□□ 1.06
RARA-201ENST00000254066 IRGQQ8WZA9 623 aa21.66■■□□□ 1.06
RARA-201ENST00000254066 OLFML3Q9NRN5 406 aa21.66■■□□□ 1.06
RARA-201ENST00000254066 SPAG7O75391 227 aa21.65■■□□□ 1.06
RARA-201ENST00000254066 DESP17661 470 aa21.65■■□□□ 1.06
RARA-201ENST00000254066 CENPCQ03188 943 aa21.65■■□□□ 1.06
RARA-201ENST00000254066 ADCY1Q08828 1119 aa21.65■■□□□ 1.06
RARA-201ENST00000254066 HNRNPDQ14103 355 aaKnown RBP21.65■■□□□ 1.06
RARA-201ENST00000254066 CCDC89Q8N998 374 aa21.65■■□□□ 1.06
RARA-201ENST00000254066 ECSITQ9BQ95 431 aa21.65■■□□□ 1.06
RARA-201ENST00000254066 REEP2Q9BRK0 252 aa21.65■■□□□ 1.06
RARA-201ENST00000254066 METTL5Q9NRN9 209 aaKnown RBP21.65■■□□□ 1.06
RARA-201ENST00000254066 UVRAGQ9P2Y5 699 aa21.65■■□□□ 1.06
RARA-201ENST00000254066 GRID1Q9ULK0 1009 aa21.65■■□□□ 1.06
RARA-201ENST00000254066 MYO3BQ8WXR4 1341 aa21.65■■□□□ 1.06
RARA-201ENST00000254066 EXOC1LA0A1B0GW35 172 aa21.65■■□□□ 1.06
RARA-201ENST00000254066 TYROBPO43914 113 aa21.65■■□□□ 1.06
RARA-201ENST00000254066 FAM200BP0CF97 657 aa21.65■■□□□ 1.06
RARA-201ENST00000254066 DLATP10515 647 aaKnown RBP21.65■■□□□ 1.06
RARA-201ENST00000254066 ADCY8P40145 1251 aa21.65■■□□□ 1.06
RARA-201ENST00000254066 ITGA9Q13797 1035 aa21.65■■□□□ 1.06
RARA-201ENST00000254066 SLFN12Q8IYM2 578 aa21.65■■□□□ 1.06
RARA-201ENST00000254066 SYCP3Q8IZU3 236 aa21.65■■□□□ 1.06
RARA-201ENST00000254066 KCTD17Q8N5Z5 321 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms