RNA–Protein interactions for RNA: ENST00000252486.8

APOE-201, Transcript of apolipoprotein E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOE, Length 1,208 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-201ENST00000252486 BPIFA3Q9BQP9 254 aa24.68■■□□□ 1.54
APOE-201ENST00000252486 THAP9Q9H5L6 903 aa24.68■■□□□ 1.54
APOE-201ENST00000252486 NLRC5Q86WI3 1866 aa24.68■■□□□ 1.54
APOE-201ENST00000252486 KIAA1671Q9BY89 1806 aa24.68■■□□□ 1.54
APOE-201ENST00000252486 CASTOR2A6NHX0 329 aa24.67■■□□□ 1.54
APOE-201ENST00000252486 TMEM189-UBE2V1I3L0A0 370 aa24.67■■□□□ 1.54
APOE-201ENST00000252486 B4GALT3O60512 393 aa24.67■■□□□ 1.54
APOE-201ENST00000252486 ARHGEF15O94989 841 aa24.67■■□□□ 1.54
APOE-201ENST00000252486 PAX3P23760 479 aa24.67■■□□□ 1.54
APOE-201ENST00000252486 SOX4Q06945 474 aaPredicted RBP24.67■■□□□ 1.54
APOE-201ENST00000252486 EPC2Q52LR7 807 aa24.67■■□□□ 1.54
APOE-201ENST00000252486 SLC39A11Q8N1S5 342 aa24.67■■□□□ 1.54
APOE-201ENST00000252486 C17orf80Q9BSJ5 609 aa24.67■■□□□ 1.54
APOE-201ENST00000252486 C11orf84Q9BUA3 381 aaPredicted RBP24.67■■□□□ 1.54
APOE-201ENST00000252486 DPP3Q9NY33 737 aa24.67■■□□□ 1.54
APOE-201ENST00000252486 TUBGCP4Q9UGJ1 667 aa24.67■■□□□ 1.54
APOE-201ENST00000252486 ITGA11Q9UKX5 1188 aa24.67■■□□□ 1.54
APOE-201ENST00000252486 RANBP2P49792 3224 aaKnown RBP24.66■■□□□ 1.54
APOE-201ENST00000252486 MARSP56192 900 aaKnown RBP24.66■■□□□ 1.54
APOE-201ENST00000252486 MYL5Q02045 173 aa24.66■■□□□ 1.54
APOE-201ENST00000252486 KRT17Q04695 432 aa24.66■■□□□ 1.54
APOE-201ENST00000252486 UPP1Q16831 310 aa24.66■■□□□ 1.54
APOE-201ENST00000252486 DCLRE1AQ6PJP8 1040 aa24.66■■□□□ 1.54
APOE-201ENST00000252486 FBXO22Q8NEZ5 403 aa24.66■■□□□ 1.54
APOE-201ENST00000252486 TMEM169Q96HH4 297 aa24.66■■□□□ 1.54
APOE-201ENST00000252486 ZNF576Q9H609 170 aa24.66■■□□□ 1.54
APOE-201ENST00000252486 PRG3Q9Y2Y8 225 aaPredicted RBP24.66■■□□□ 1.54
APOE-201ENST00000252486 R3HCC1Q9Y3T6 440 aaKnown RBP24.66■■□□□ 1.54
APOE-201ENST00000252486 TRIOBPQ9H2D6 2365 aa24.65■■□□□ 1.54
APOE-201ENST00000252486 LRRIQ3A6PVS8 624 aaPredicted RBP24.65■■□□□ 1.54
APOE-201ENST00000252486 SOX1O00570 391 aaPredicted RBP24.65■■□□□ 1.54
APOE-201ENST00000252486 PODXLO00592 558 aa24.65■■□□□ 1.54
APOE-201ENST00000252486 GTF2H1P32780 548 aa24.65■■□□□ 1.54
APOE-201ENST00000252486 PLCB3Q01970 1234 aa24.65■■□□□ 1.54
APOE-201ENST00000252486 PLEKHO2Q8TD55 490 aa24.65■■□□□ 1.54
APOE-201ENST00000252486 IGSF21Q96ID5 467 aa24.65■■□□□ 1.54
APOE-201ENST00000252486 MTMR12Q9C0I1 747 aa24.65■■□□□ 1.54
APOE-201ENST00000252486 GZF1Q9H116 711 aaPredicted RBP24.65■■□□□ 1.54
APOE-201ENST00000252486 GOLGA2P5Q9HBQ8 144 aa24.65■■□□□ 1.54
APOE-201ENST00000252486 MAGEC2Q9UBF1 373 aaPredicted RBP24.65■■□□□ 1.54
APOE-201ENST00000252486 NFE2L3Q9Y4A8 694 aa24.65■■□□□ 1.54
APOE-201ENST00000252486 SMTNL1A8MU46 457 aa24.64■■□□□ 1.54
APOE-201ENST00000252486 TADA2AO75478 443 aa24.64■■□□□ 1.54
APOE-201ENST00000252486 B3GAT3O94766 335 aa24.64■■□□□ 1.54
APOE-201ENST00000252486 ZNF165P49910 485 aa24.64■■□□□ 1.54
APOE-201ENST00000252486 CLCNKBP51801 687 aa24.64■■□□□ 1.54
APOE-201ENST00000252486 UBE3AQ05086 875 aa24.64■■□□□ 1.54
APOE-201ENST00000252486 ZNF697Q5TEC3 545 aa24.64■■□□□ 1.54
APOE-201ENST00000252486 OR5B17Q8NGF7 314 aa24.64■■□□□ 1.54
APOE-201ENST00000252486 ARNTL2Q8WYA1 636 aa24.64■■□□□ 1.54
APOE-201ENST00000252486 PUF60Q9UHX1 559 aaKnown RBP24.64■■□□□ 1.54
APOE-201ENST00000252486 ADAM28Q9UKQ2 775 aa24.64■■□□□ 1.54
APOE-201ENST00000252486 LZTS1Q9Y250 596 aa24.64■■□□□ 1.54
APOE-201ENST00000252486 PTPRJQ12913 1337 aa24.63■■□□□ 1.53
APOE-201ENST00000252486 ANO9A1A5B4 782 aa24.63■■□□□ 1.53
APOE-201ENST00000252486 FGF18O76093 207 aa24.63■■□□□ 1.53
APOE-201ENST00000252486 PBX3P40426 434 aa24.63■■□□□ 1.53
APOE-201ENST00000252486 PNPLA4P41247 253 aa24.63■■□□□ 1.53
APOE-201ENST00000252486 RBP5P82980 135 aa24.63■■□□□ 1.53
APOE-201ENST00000252486 ELAVL2Q12926 359 aaKnown RBP24.63■■□□□ 1.53
APOE-201ENST00000252486 TCERG1LQ5VWI1 586 aa24.63■■□□□ 1.53
APOE-201ENST00000252486 C9orf57Q5W0N0 161 aa24.63■■□□□ 1.53
APOE-201ENST00000252486 LMBRD2Q68DH5 695 aaPredicted RBP24.63■■□□□ 1.53
APOE-201ENST00000252486 TRAPPC11Q7Z392 1133 aa24.63■■□□□ 1.53
APOE-201ENST00000252486 C1orf127Q8N9H9 656 aa24.63■■□□□ 1.53
APOE-201ENST00000252486 KLHL23Q8NBE8 558 aa24.63■■□□□ 1.53
APOE-201ENST00000252486 LRCH3Q96II8 777 aa24.63■■□□□ 1.53
APOE-201ENST00000252486 CNOT6LQ96LI5 555 aaKnown RBP24.63■■□□□ 1.53
APOE-201ENST00000252486 ZNF560Q96MR9 790 aa24.63■■□□□ 1.53
APOE-201ENST00000252486 POP1Q99575 1024 aaKnown RBP24.63■■□□□ 1.53
APOE-201ENST00000252486 ANP32EQ9BTT0 268 aa24.63■■□□□ 1.53
APOE-201ENST00000252486 MTUS1Q9ULD2 1270 aa24.63■■□□□ 1.53
APOE-201ENST00000252486 NT5C1B-RDH14C9J2C7 533 aa24.62■■□□□ 1.53
APOE-201ENST00000252486 H3BNC9 293 aa24.62■■□□□ 1.53
APOE-201ENST00000252486 PIRO00625 290 aa24.62■■□□□ 1.53
APOE-201ENST00000252486 TRAPPC3O43617 180 aa24.62■■□□□ 1.53
APOE-201ENST00000252486 GUCY2FP51841 1108 aa24.62■■□□□ 1.53
APOE-201ENST00000252486 DLG4P78352 724 aa24.62■■□□□ 1.53
APOE-201ENST00000252486 DCAF17Q5H9S7 520 aaPredicted RBP24.62■■□□□ 1.53
APOE-201ENST00000252486 LRSAM1Q6UWE0 723 aa24.62■■□□□ 1.53
APOE-201ENST00000252486 TRIM59Q8IWR1 403 aa24.62■■□□□ 1.53
APOE-201ENST00000252486 LRRC52Q8N7C0 313 aa24.62■■□□□ 1.53
APOE-201ENST00000252486 PAAF1Q9BRP4 392 aa24.62■■□□□ 1.53
APOE-201ENST00000252486 MARCH5Q9NX47 278 aa24.62■■□□□ 1.53
APOE-201ENST00000252486 NUB1Q9Y5A7 615 aa24.62■■□□□ 1.53
APOE-201ENST00000252486 SF3B1O75533 1304 aaKnown RBP eCLIP24.61■■□□□ 1.532e-7■■■■■ 77.5
APOE-201ENST00000252486 PHACTR2O75167 634 aa24.61■■□□□ 1.53
APOE-201ENST00000252486 KIF4AO95239 1232 aa24.61■■□□□ 1.53
APOE-201ENST00000252486 C4BPAP04003 597 aaKnown RBP24.61■■□□□ 1.53
APOE-201ENST00000252486 ITGB3P05106 788 aa24.61■■□□□ 1.53
APOE-201ENST00000252486 TRIM49P0CI25 452 aa24.61■■□□□ 1.53
APOE-201ENST00000252486 TRIM49CP0CI26 452 aa24.61■■□□□ 1.53
APOE-201ENST00000252486 ZNF445P59923 1031 aa24.61■■□□□ 1.53
APOE-201ENST00000252486 GPM6BQ13491 265 aa24.61■■□□□ 1.53
APOE-201ENST00000252486 ZACNQ401N2 412 aa24.61■■□□□ 1.53
APOE-201ENST00000252486 C1orf220Q5T0J3 134 aa24.61■■□□□ 1.53
APOE-201ENST00000252486 IRF2BP1Q8IU81 584 aa24.61■■□□□ 1.53
APOE-201ENST00000252486 AOPEPQ8N6M6 819 aa24.61■■□□□ 1.53
APOE-201ENST00000252486 ZNF516Q92618 1163 aa24.61■■□□□ 1.53
APOE-201ENST00000252486 LMAN2LQ9H0V9 348 aa24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms