RNA–Protein interactions for RNA: ENST00000251775.8

SNX4-201, Transcript of sorting nexin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX4, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-201ENST00000251775 PYGMP11217 842 aa20.18■□□□□ 0.82
SNX4-201ENST00000251775 CETN1Q12798 172 aa20.18■□□□□ 0.82
SNX4-201ENST00000251775 XKR9Q5GH70 373 aa20.18■□□□□ 0.82
SNX4-201ENST00000251775 UTP4Q969X6 686 aaKnown RBP20.18■□□□□ 0.82
SNX4-201ENST00000251775 PXMP2Q9NR77 195 aa20.18■□□□□ 0.82
SNX4-201ENST00000251775 PARP14Q460N5 1801 aa20.18■□□□□ 0.82
SNX4-201ENST00000251775 HGSO14964 777 aaPredicted RBP20.18■□□□□ 0.82
SNX4-201ENST00000251775 WFS1O76024 890 aa20.18■□□□□ 0.82
SNX4-201ENST00000251775 PSMC5P62195 406 aa20.18■□□□□ 0.82
SNX4-201ENST00000251775 MTMR2Q13614 643 aa20.18■□□□□ 0.82
SNX4-201ENST00000251775 SIX1Q15475 284 aaPredicted RBP20.18■□□□□ 0.82
SNX4-201ENST00000251775 SEL1L2Q5TEA6 688 aa20.18■□□□□ 0.82
SNX4-201ENST00000251775 WNK4Q96J92 1243 aa20.18■□□□□ 0.82
SNX4-201ENST00000251775 KCNK9Q9NPC2 374 aa20.18■□□□□ 0.82
SNX4-201ENST00000251775 PASKQ96RG2 1323 aa20.17■□□□□ 0.82
SNX4-201ENST00000251775 A6NHS1 94 aa20.17■□□□□ 0.82
SNX4-201ENST00000251775 COMTP21964 271 aa20.17■□□□□ 0.82
SNX4-201ENST00000251775 SKIV2L2P42285 1042 aaKnown RBP20.17■□□□□ 0.82
SNX4-201ENST00000251775 FAM102BQ5T8I3 360 aa20.17■□□□□ 0.82
SNX4-201ENST00000251775 ZNF746Q6NUN9 644 aaPredicted RBP20.17■□□□□ 0.82
SNX4-201ENST00000251775 NSMFQ6X4W1 530 aa20.17■□□□□ 0.82
SNX4-201ENST00000251775 RNF207Q6ZRF8 634 aa20.17■□□□□ 0.82
SNX4-201ENST00000251775 RPUSD2Q8IZ73 545 aaKnown RBP20.17■□□□□ 0.82
SNX4-201ENST00000251775 KCNV2Q8TDN2 545 aa20.17■□□□□ 0.82
SNX4-201ENST00000251775 POP1Q99575 1024 aaKnown RBP20.17■□□□□ 0.82
SNX4-201ENST00000251775 FAM167BQ9BTA0 163 aa20.17■□□□□ 0.82
SNX4-201ENST00000251775 MAPK13O15264 365 aa20.17■□□□□ 0.82
SNX4-201ENST00000251775 FTLP02792 175 aaPredicted RBP20.17■□□□□ 0.82
SNX4-201ENST00000251775 ADSSP30520 456 aa20.17■□□□□ 0.82
SNX4-201ENST00000251775 MXI1P50539 228 aa20.17■□□□□ 0.82
SNX4-201ENST00000251775 RNF43Q68DV7 783 aa20.17■□□□□ 0.82
SNX4-201ENST00000251775 CBWD2Q8IUF1 395 aa20.17■□□□□ 0.82
SNX4-201ENST00000251775 TGS1Q96RS0 853 aaKnown RBP20.17■□□□□ 0.82
SNX4-201ENST00000251775 KIFC3Q9BVG8 833 aa20.17■□□□□ 0.82
SNX4-201ENST00000251775 RPAP3Q9H6T3 665 aaPredicted RBP20.17■□□□□ 0.82
SNX4-201ENST00000251775 KIAA1217Q5T5P2 1943 aa20.16■□□□□ 0.82
SNX4-201ENST00000251775 TESPA1A2RU30 521 aaPredicted RBP20.16■□□□□ 0.82
SNX4-201ENST00000251775 WDR64B1ANS9 1081 aa20.16■□□□□ 0.82
SNX4-201ENST00000251775 UNC5CO95185 931 aa20.16■□□□□ 0.82
SNX4-201ENST00000251775 JAK3P52333 1124 aa20.16■□□□□ 0.82
SNX4-201ENST00000251775 TCEAL1Q15170 157 aa20.16■□□□□ 0.82
SNX4-201ENST00000251775 ECHDC2Q86YB7 292 aa20.16■□□□□ 0.82
SNX4-201ENST00000251775 SLC13A5Q86YT5 568 aaPredicted RBP20.16■□□□□ 0.82
SNX4-201ENST00000251775 RPS6KC1Q96S38 1066 aa20.16■□□□□ 0.82
SNX4-201ENST00000251775 PCDHB18PQ96TA0 734 aa20.16■□□□□ 0.82
SNX4-201ENST00000251775 TIPINQ9BVW5 301 aa20.16■□□□□ 0.82
SNX4-201ENST00000251775 TRIM7Q9C029 511 aa20.16■□□□□ 0.82
SNX4-201ENST00000251775 SPATS2LQ9NUQ6 558 aaKnown RBP20.16■□□□□ 0.82
SNX4-201ENST00000251775 CHORDC1Q9UHD1 332 aaPredicted RBP20.16■□□□□ 0.82
SNX4-201ENST00000251775 RIPK3Q9Y572 518 aa20.16■□□□□ 0.82
SNX4-201ENST00000251775 SGPL1O95470 568 aa20.16■□□□□ 0.82
SNX4-201ENST00000251775 LINGO3P0C6S8 592 aa20.16■□□□□ 0.82
SNX4-201ENST00000251775 INHBEP58166 350 aa20.16■□□□□ 0.82
SNX4-201ENST00000251775 TAF11Q15544 211 aa20.16■□□□□ 0.82
SNX4-201ENST00000251775 ANO5Q75V66 913 aa20.16■□□□□ 0.82
SNX4-201ENST00000251775 CD101Q93033 1021 aa20.16■□□□□ 0.82
SNX4-201ENST00000251775 NAF1Q96HR8 494 aaKnown RBP20.16■□□□□ 0.82
SNX4-201ENST00000251775 KREMEN1Q96MU8 473 aa20.16■□□□□ 0.82
SNX4-201ENST00000251775 NKX1-2Q9UD57 310 aaPredicted RBP20.16■□□□□ 0.82
SNX4-201ENST00000251775 TULP1O00294 542 aaPredicted RBP20.15■□□□□ 0.82
SNX4-201ENST00000251775 LUC7L3O95232 432 aaKnown RBP20.15■□□□□ 0.82
SNX4-201ENST00000251775 BRAFP15056 766 aa20.15■□□□□ 0.82
SNX4-201ENST00000251775 CHRNB2P17787 502 aa20.15■□□□□ 0.82
SNX4-201ENST00000251775 ATP5DP30049 168 aa20.15■□□□□ 0.82
SNX4-201ENST00000251775 CALCOCO2Q13137 446 aa20.15■□□□□ 0.82
SNX4-201ENST00000251775 MESDQ14696 234 aa20.15■□□□□ 0.82
SNX4-201ENST00000251775 ARHGEF16Q5VV41 709 aa20.15■□□□□ 0.82
SNX4-201ENST00000251775 CPNE8Q86YQ8 564 aa20.15■□□□□ 0.82
SNX4-201ENST00000251775 SAMD3Q8N6K7 520 aa20.15■□□□□ 0.82
SNX4-201ENST00000251775 TMEM161BQ8NDZ6 487 aa20.15■□□□□ 0.82
SNX4-201ENST00000251775 SEMA4DQ92854 862 aa20.15■□□□□ 0.82
SNX4-201ENST00000251775 VTI1AQ96AJ9 217 aa20.15■□□□□ 0.82
SNX4-201ENST00000251775 ATG4CQ96DT6 458 aa20.15■□□□□ 0.82
SNX4-201ENST00000251775 ETNK1Q9HBU6 452 aa20.15■□□□□ 0.82
SNX4-201ENST00000251775 ACP6Q9NPH0 428 aa20.15■□□□□ 0.82
SNX4-201ENST00000251775 ANKEF1Q9NU02 776 aa20.15■□□□□ 0.82
SNX4-201ENST00000251775 KLHL14Q9P2G3 628 aa20.15■□□□□ 0.82
SNX4-201ENST00000251775 TBX20Q9UMR3 447 aa20.15■□□□□ 0.82
SNX4-201ENST00000251775 CTDP1Q9Y5B0 961 aaPredicted RBP20.15■□□□□ 0.82
SNX4-201ENST00000251775 DOCK5Q9H7D0 1870 aa20.15■□□□□ 0.82
SNX4-201ENST00000251775 COL11A1P12107 1806 aaPredicted RBP20.15■□□□□ 0.82
SNX4-201ENST00000251775 ZBED4O75132 1171 aa20.15■□□□□ 0.82
SNX4-201ENST00000251775 CHKAP35790 457 aa20.15■□□□□ 0.82
SNX4-201ENST00000251775 SNRPFP62306 86 aaKnown RBP20.15■□□□□ 0.82
SNX4-201ENST00000251775 KRT76Q01546 638 aa20.15■□□□□ 0.82
SNX4-201ENST00000251775 MKRN3Q13064 507 aaKnown RBP20.15■□□□□ 0.82
SNX4-201ENST00000251775 NOP9Q86U38 636 aaKnown RBP20.15■□□□□ 0.82
SNX4-201ENST00000251775 IWS1Q96ST2 819 aa20.15■□□□□ 0.82
SNX4-201ENST00000251775 MTUS1Q9ULD2 1270 aa20.15■□□□□ 0.82
SNX4-201ENST00000251775 ZNFX1Q9P2E3 1918 aaKnown RBP20.15■□□□□ 0.82
SNX4-201ENST00000251775 ENO4A6NNW6 628 aa20.14■□□□□ 0.82
SNX4-201ENST00000251775 VWA5AO00534 786 aa20.14■□□□□ 0.82
SNX4-201ENST00000251775 GNAZP19086 355 aa20.14■□□□□ 0.82
SNX4-201ENST00000251775 SFNP31947 248 aa20.14■□□□□ 0.82
SNX4-201ENST00000251775 NPTX2P47972 431 aa20.14■□□□□ 0.82
SNX4-201ENST00000251775 CCDC15Q0P6D6 951 aa20.14■□□□□ 0.82
SNX4-201ENST00000251775 BAATQ14032 418 aaPredicted RBP20.14■□□□□ 0.82
SNX4-201ENST00000251775 MTFR1Q15390 333 aa20.14■□□□□ 0.82
SNX4-201ENST00000251775 SNRNP35Q16560 246 aaKnown RBP20.14■□□□□ 0.82
SNX4-201ENST00000251775 RHBDF2Q6PJF5 856 aa20.14■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms