RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 CTTNBP2NLQ9P2B4 639 aa18.15■□□□□ 0.5
FOXA1-201ENST00000250448 FRMD4BQ9Y2L6 1034 aa18.15■□□□□ 0.5
FOXA1-201ENST00000250448 LRRN2O75325 713 aa18.14■□□□□ 0.49
FOXA1-201ENST00000250448 CTNNA2P26232 953 aa18.14■□□□□ 0.49
FOXA1-201ENST00000250448 PPP2R5AQ15172 486 aa18.14■□□□□ 0.49
FOXA1-201ENST00000250448 E2F5Q15329 346 aa18.14■□□□□ 0.49
FOXA1-201ENST00000250448 PPP1R7Q15435 360 aa18.14■□□□□ 0.49
FOXA1-201ENST00000250448 HIBCHQ6NVY1 386 aaPredicted RBP18.14■□□□□ 0.49
FOXA1-201ENST00000250448 FAM178BQ8IXR5 827 aa18.14■□□□□ 0.49
FOXA1-201ENST00000250448 C4orf19Q8IY42 314 aa18.14■□□□□ 0.49
FOXA1-201ENST00000250448 N4BP2L2Q92802 583 aaPredicted RBP18.14■□□□□ 0.49
FOXA1-201ENST00000250448 FIZ1Q96SL8 496 aa18.14■□□□□ 0.49
FOXA1-201ENST00000250448 PRMT1Q99873 361 aaKnown RBP18.14■□□□□ 0.49
FOXA1-201ENST00000250448 ZSWIM1Q9BR11 485 aa18.14■□□□□ 0.49
FOXA1-201ENST00000250448 PODXLO00592 558 aa18.14■□□□□ 0.49
FOXA1-201ENST00000250448 SF3A3Q12874 501 aaKnown RBP eCLIP18.14■□□□□ 0.49
FOXA1-201ENST00000250448 TTC27Q6P3X3 843 aa18.14■□□□□ 0.49
FOXA1-201ENST00000250448 ABHD15Q6UXT9 468 aa18.14■□□□□ 0.49
FOXA1-201ENST00000250448 KCTD17Q8N5Z5 321 aa18.14■□□□□ 0.49
FOXA1-201ENST00000250448 CCDC63Q8NA47 563 aa18.14■□□□□ 0.49
FOXA1-201ENST00000250448 UHMK1Q8TAS1 419 aaKnown RBP18.14■□□□□ 0.49
FOXA1-201ENST00000250448 SLC20A1Q8WUM9 679 aa18.14■□□□□ 0.49
FOXA1-201ENST00000250448 NSRP1Q9H0G5 558 aaKnown RBP18.14■□□□□ 0.49
FOXA1-201ENST00000250448 STMN4Q9H169 189 aaPredicted RBP18.14■□□□□ 0.49
FOXA1-201ENST00000250448 PDGFCQ9NRA1 345 aa18.14■□□□□ 0.49
FOXA1-201ENST00000250448 AGPAT3Q9NRZ7 376 aa18.14■□□□□ 0.49
FOXA1-201ENST00000250448 DMAC2Q9NW81 257 aa18.14■□□□□ 0.49
FOXA1-201ENST00000250448 TMEM110-MUSTN1A8MSY1 372 aa18.13■□□□□ 0.49
FOXA1-201ENST00000250448 STAM2O75886 525 aa18.13■□□□□ 0.49
FOXA1-201ENST00000250448 ATP6V1G2O95670 118 aa18.13■□□□□ 0.49
FOXA1-201ENST00000250448 FGFR4P22455 802 aa18.13■□□□□ 0.49
FOXA1-201ENST00000250448 ZNF157P51786 506 aaPredicted RBP18.13■□□□□ 0.49
FOXA1-201ENST00000250448 COPS5Q92905 334 aa18.13■□□□□ 0.49
FOXA1-201ENST00000250448 ELAC2Q9BQ52 826 aaKnown RBP18.13■□□□□ 0.49
FOXA1-201ENST00000250448 MROH8Q9H579 483 aa18.13■□□□□ 0.49
FOXA1-201ENST00000250448 SEPT9Q9UHD8 586 aaPredicted RBP18.13■□□□□ 0.49
FOXA1-201ENST00000250448 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.13■□□□□ 0.49
FOXA1-201ENST00000250448 DNAJC25-GNG10A0A024R161 153 aa18.13■□□□□ 0.49
FOXA1-201ENST00000250448 PSAPP07602 524 aa18.13■□□□□ 0.49
FOXA1-201ENST00000250448 VIMP08670 466 aaKnown RBP18.13■□□□□ 0.49
FOXA1-201ENST00000250448 RFX1P22670 979 aa18.13■□□□□ 0.49
FOXA1-201ENST00000250448 PRKCEQ02156 737 aa18.13■□□□□ 0.49
FOXA1-201ENST00000250448 FAM102BQ5T8I3 360 aa18.13■□□□□ 0.49
FOXA1-201ENST00000250448 SEL1L2Q5TEA6 688 aa18.13■□□□□ 0.49
FOXA1-201ENST00000250448 PHLDB3Q6NSJ2 640 aa18.13■□□□□ 0.49
FOXA1-201ENST00000250448 CEP170P1Q96L14 293 aa18.13■□□□□ 0.49
FOXA1-201ENST00000250448 PCDHA3Q9Y5H8 950 aa18.13■□□□□ 0.49
FOXA1-201ENST00000250448 FOXN3O00409 490 aaPredicted RBP18.13■□□□□ 0.49
FOXA1-201ENST00000250448 RIPK2O43353 540 aa18.13■□□□□ 0.49
FOXA1-201ENST00000250448 GGPS1O95749 300 aa18.13■□□□□ 0.49
FOXA1-201ENST00000250448 SLCO1A2P46721 670 aa18.13■□□□□ 0.49
FOXA1-201ENST00000250448 CCDC137Q6PK04 289 aaKnown RBP18.13■□□□□ 0.49
FOXA1-201ENST00000250448 ZDHHC14Q8IZN3 488 aa18.13■□□□□ 0.49
FOXA1-201ENST00000250448 KIFC3Q9BVG8 833 aa18.13■□□□□ 0.49
FOXA1-201ENST00000250448 NOD2Q9HC29 1040 aa18.13■□□□□ 0.49
FOXA1-201ENST00000250448 DBR1Q9UK59 544 aaKnown RBP18.13■□□□□ 0.49
FOXA1-201ENST00000250448 NFASCO94856 1347 aa18.12■□□□□ 0.49
FOXA1-201ENST00000250448 ZNF131P52739 623 aa18.12■□□□□ 0.49
FOXA1-201ENST00000250448 SLMAPQ14BN4 828 aa18.12■□□□□ 0.49
FOXA1-201ENST00000250448 GJC2Q5T442 439 aaPredicted RBP18.12■□□□□ 0.49
FOXA1-201ENST00000250448 STXBP4Q6ZWJ1 553 aa18.12■□□□□ 0.49
FOXA1-201ENST00000250448 ATP6V0A4Q9HBG4 840 aa18.12■□□□□ 0.49
FOXA1-201ENST00000250448 SEL1LQ9UBV2 794 aa18.12■□□□□ 0.49
FOXA1-201ENST00000250448 TISP43B9A030 160 aa18.12■□□□□ 0.49
FOXA1-201ENST00000250448 RASGRF2O14827 1237 aa18.12■□□□□ 0.49
FOXA1-201ENST00000250448 STBD1O95210 358 aa18.12■□□□□ 0.49
FOXA1-201ENST00000250448 LYPLA2O95372 231 aa18.12■□□□□ 0.49
FOXA1-201ENST00000250448 SUPT20HL2P0C7V6 817 aa18.12■□□□□ 0.49
FOXA1-201ENST00000250448 ADORA2AP29274 412 aa18.12■□□□□ 0.49
FOXA1-201ENST00000250448 ICAM3P32942 547 aa18.12■□□□□ 0.49
FOXA1-201ENST00000250448 IFNAR2P48551 515 aa18.12■□□□□ 0.49
FOXA1-201ENST00000250448 BFSP1Q12934 665 aa18.12■□□□□ 0.49
FOXA1-201ENST00000250448 GRM1Q13255 1194 aa18.12■□□□□ 0.49
FOXA1-201ENST00000250448 TCEAL1Q15170 157 aa18.12■□□□□ 0.49
FOXA1-201ENST00000250448 TNFAIP8L3Q5GJ75 292 aa18.12■□□□□ 0.49
FOXA1-201ENST00000250448 ZNF720Q7Z2F6 126 aa18.12■□□□□ 0.49
FOXA1-201ENST00000250448 TRPM8Q7Z2W7 1104 aa18.12■□□□□ 0.49
FOXA1-201ENST00000250448 ANKRD23Q86SG2 305 aa18.12■□□□□ 0.49
FOXA1-201ENST00000250448 SENP7Q9BQF6 1050 aa18.12■□□□□ 0.49
FOXA1-201ENST00000250448 CPA4Q9UI42 421 aa18.12■□□□□ 0.49
FOXA1-201ENST00000250448 K7ENM7 598 aa18.11■□□□□ 0.49
FOXA1-201ENST00000250448 FARP2O94887 1054 aaPredicted RBP18.11■□□□□ 0.49
FOXA1-201ENST00000250448 FTLP02792 175 aaPredicted RBP18.11■□□□□ 0.49
FOXA1-201ENST00000250448 ATP4AP20648 1035 aa18.11■□□□□ 0.49
FOXA1-201ENST00000250448 AUHQ13825 339 aaKnown RBP18.11■□□□□ 0.49
FOXA1-201ENST00000250448 CNGA2Q16280 664 aa18.11■□□□□ 0.49
FOXA1-201ENST00000250448 MTERF2Q49AM1 385 aa18.11■□□□□ 0.49
FOXA1-201ENST00000250448 BAIAP2L1Q9UHR4 511 aa18.11■□□□□ 0.49
FOXA1-201ENST00000250448 MYH9P35579 1960 aaKnown RBP18.11■□□□□ 0.49
FOXA1-201ENST00000250448 RARGP13631 454 aa18.11■□□□□ 0.49
FOXA1-201ENST00000250448 MIS18BP1Q6P0N0 1132 aa18.11■□□□□ 0.49
FOXA1-201ENST00000250448 TAOK1Q7L7X3 1001 aa18.11■□□□□ 0.49
FOXA1-201ENST00000250448 TRIM50Q86XT4 487 aa18.11■□□□□ 0.49
FOXA1-201ENST00000250448 LMO3Q8TAP4 145 aa18.11■□□□□ 0.49
FOXA1-201ENST00000250448 ATP6V0A1Q93050 837 aa18.11■□□□□ 0.49
FOXA1-201ENST00000250448 RPS6KC1Q96S38 1066 aa18.11■□□□□ 0.49
FOXA1-201ENST00000250448 CCDC113Q9H0I3 377 aa18.11■□□□□ 0.49
FOXA1-201ENST00000250448 DONSONQ9NYP3 566 aa18.11■□□□□ 0.49
FOXA1-201ENST00000250448 GSTTP1A0A1W2PQM5 241 aa18.1■□□□□ 0.49
FOXA1-201ENST00000250448 CFAP73A6NFT4 308 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms